PRGDB00044944 (At4g14370)

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At4g14370
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 108740056 (DQ527805)
Gene Class Unknown
Domain Type LRR, LRR, LRR
Gene Species Arabidopsis thaliana

Comment?

Arabidopsis thaliana ecotype Ra-0 disease resistance protein (At4g14370) gene, partial cds.

DNA Sequence

GGAGTTTCCACCTCATCTACGGTTGCTTCGGTGGGAAGCATACCCAAGTAATGCTCTTCCTACTACATTTCATCCAGAATATCTTGTAGAACTTGATTTGAAGGAGAGCCAGCTTGAGAAGCTTTGGCAAGGAACACAGCCACTTACAAATCTCAAGAAAATGGATTTGACGCGATCCTCTCATTTGAAGGAACTTCCAGATCTTTCAAATGCTACAAATCTCGAGAGGTTGGAGCTGAGTTATTGCAAGAGTTTGGTAGAGATTCCTTCCTCTTTTTCGGAACTTCGAAAACTAGAGACGTTGGTAATACACAACTGCACAAAGCTAGAAGTTGTTCCAACTCTCATCAACTTGGCATCTCTTGATTTCTTCAACATGCATGGTTGCTCCCAACTGAAAAAATTTCCAGGTATTTCTACGCACATCTCAAGACTCGTTATAGATGACACATTGGTAGAAGAACTGCCTACATCAATAATACTTTGCACTCGGCTTAGGACTCTCATGATAAGCGGCAGTGGAAACTTTAAGACATTAACATATCTCCCTATGAGTCTAACGTATCTAGACCTAAGGTGTACGGGTATTGAGAAGATTCCAGATTG


Protein sequences

Name Description Sequence
disease resistance protein disease resistance protein [Arabidopsis thaliana].

EFPPHLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLDLRCTGIEKIPD


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR11017
1-201 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

EFPPHLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLDLRCTGIEKIPD

HMMPanther: PTHR11017:SF20
1-201 PTHR11017:SF20,SUBFAMILY NOT NAMED

EFPPHLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLDLRCTGIEKIPD

superfamily: SSF52058
2-201 SSF52058,LRR

FPPHLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLDLRCTGIEKIPD

Gene3D: G3DSA:3.80.10.10
3-201 G3DSA:3.80.10.10

PPHLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLDLRCTGIEKIPD

HMMPfam: PF07725
IPR011713
27-46 LRR_3
Leucine-rich repeat 3

YLVELDLKESQLEKLWQGTQ

HMMPfam: PF13855
72-129 LRR_8,Leucine rich repeat

TNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGC

HMMPfam: PF00560
IPR001611
185-201 LRR_1
Leucine-rich repeat

SLTYLDLRCTGIEKIPD


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Analyses

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