PRGDB00045442 (At1g59620)
At1g59620 | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 108738845 (DQ526954) |
Gene Class | Unknown |
Domain Type | Ser-Thr Kinase, Ser-Thr Kinase, LRR |
Gene Species | Arabidopsis thaliana |
DNA Sequence
CGAGGAGCTTGGTGGTTATAGGGGATTCGAAGTATGGTTTACGAGGCTACAGTTGATGAGGGTTTTAGATCTCCATGGAGTTGAGTTTGGAGGGGAGTTACCCTCTAGCATCGGACTGCTAATCCACTTGAGATATTTGAGTTTATATCGGGCAAAAGCATCTCATCTACCTTCGTCTATGCGGAATTTGAATATGCTGCTCTATTTAAACCTATGTGTACAAGAGAGTTGTTACATTTACATTCCCAATTTCTTGAAAGAGATGCTAGAGCTGAAATACCTCTCTCTCCCACTAAGAATGGATGATAAGGTAAAACTAGAATTGGGTAATCTAGTCAACCTGGAGAAGTTGGAAAATTTCTCAACAGAGCATGGGGGAGTGGGGGATCTTCAGTTTATGACCCGGCTTAGAGCCCTCTCTATCTATATCAGAGGCAGGTTGACTATGAAAACTCTATCTTCATCTCTAAGTAAACTGAGAGACTTGGAAAATCTTACAATCTGTTATTACCCGATGTATGCTCCCATGAGTGGTATAGAAGGATTAGTTTTGGACTGCGATCAGCTCAAGCATCTGAATTTGAGAATATATATGCCAAGGTTACCTGATGAACAACATTTTCCTTGGCATCTTCGAAACATATCTCTAGCTGAGTGTTGTTTGAAGGAGGATCCAATGCCGATTTTAGAGAAGCTGCTTCAATTAAACGAGGTCAGTTTATCTCATCAATCTTTCTGTGGGAAGAGAATGGTTTGCTCGGATGGTGGGTTTCCTCAATTGCAAAAGCTCGATTTGTGTGGACTGGAGGAGTGGGAAGAGTGGATAGTCGAAGAAGGCTCCATGCCACTTCTTCATAAGCTGACTATCCGCAACGATTCTAAATTAAAGGAGCTTCCTGATGGGTTGAAATTTATCACTTCCTTGAAAGAAGTGCATGTCATCTTAAATAATTGGGACTTTAAGAAGAAACTGTCCAGGGGAGGAGAAGATTACTACAAAGTCCAACACATTCCTCTTGTTCGATTTCT
Protein sequences
Name | Description | Sequence |
---|---|---|
disease resistance protein | disease resistance protein [Arabidopsis thaliana]. | EELGGYRGFEVWFTRLQLMRVLDLHGVEFGGELPSSIGLLIHLRYLSLYRAKASHLPSSMRNLNMLLYLNLCVQESCYIYIPNFLKEMLELKYLSLPLRMDDKVKLELGNLVNLEKLENFSTEHGGVGDLQFMTRLRALSIYIRGRLTMKTLSSSLSKLRDLENLTICYYPMYAPMSGIEGLVLDCDQLKHLNLRIYMPRLPDEQHFPWHLRNISLAECCLKEDPMPILEKLLQLNEVSLSHQSFCGKRMVCSDGGFPQLQKLDLCGLEEWEEWIVEEGSMPLLHKLTIRNDSKLKELPDGLKFITSLKEVHVILNNWDFKKKLSRGGEDYYKVQHIPLVRFL |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF52058 | 5-319 | SSF52058,LRR | GYRGFEVWFTRLQLMRVLDLHGVEFGGELPSSIGLLIHLRYLSLYRAKASHLPSSMRNLNMLLYLNLCVQESCYIYIPNFLKEMLELKYLSLPLRMDDKVKLELGNLVNLEKLENFSTEHGGVGDLQFMTRLRALSIYIRGRLTMKTLSSSLSKLRDLENLTICYYPMYAPMSGIEGLVLDCDQLKHLNLRIYMPRLPDEQHFPWHLRNISLAECCLKEDPMPILEKLLQLNEVSLSHQSFCGKRMVCSDGGFPQLQKLDLCGLEEWEEWIVEEGSMPLLHKLTIRNDSKLKELPDGLKFITSLKEVHVILNNWD |
HMMPanther: PTHR23155 | 10-322 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | EVWFTRLQLMRVLDLHGVEFGGELPSSIGLLIHLRYLSLYRAKASHLPSSMRNLNMLLYLNLCVQESCYIYIPNFLKEMLELKYLSLPLRMDDKVKLELGNLVNLEKLENFSTEHGGVGDLQFMTRLRALSIYIRGRLTMKTLSSSLSKLRDLENLTICYYPMYAPMSGIEGLVLDCDQLKHLNLRIYMPRLPDEQHFPWHLRNISLAECCLKEDPMPILEKLLQLNEVSLSHQSFCGKRMVCSDGGFPQLQKLDLCGLEEWEEWIVEEGSMPLLHKLTIRNDSKLKELPDGLKFITSLKEVHVILNNWDFKK |
HMMPanther: PTHR23155:SF240 | 10-322 | PTHR23155:SF240,CW9 | EVWFTRLQLMRVLDLHGVEFGGELPSSIGLLIHLRYLSLYRAKASHLPSSMRNLNMLLYLNLCVQESCYIYIPNFLKEMLELKYLSLPLRMDDKVKLELGNLVNLEKLENFSTEHGGVGDLQFMTRLRALSIYIRGRLTMKTLSSSLSKLRDLENLTICYYPMYAPMSGIEGLVLDCDQLKHLNLRIYMPRLPDEQHFPWHLRNISLAECCLKEDPMPILEKLLQLNEVSLSHQSFCGKRMVCSDGGFPQLQKLDLCGLEEWEEWIVEEGSMPLLHKLTIRNDSKLKELPDGLKFITSLKEVHVILNNWDFKK |
Gene3D: G3DSA:3.80.10.10 | 13-97 | G3DSA:3.80.10.10 | FTRLQLMRVLDLHGVEFGGELPSSIGLLIHLRYLSLYRAKASHLPSSMRNLNMLLYLNLCVQESCYIYIPNFLKEMLELKYLSLP |
Gene3D: G3DSA:3.80.10.10 | 146-319 | G3DSA:3.80.10.10 | RLTMKTLSSSLSKLRDLENLTICYYPMYAPMSGIEGLVLDCDQLKHLNLRIYMPRLPDEQHFPWHLRNISLAECCLKEDPMPILEKLLQLNEVSLSHQSFCGKRMVCSDGGFPQLQKLDLCGLEEWEEWIVEEGSMPLLHKLTIRNDSKLKELPDGLKFITSLKEVHVILNNWD |
List of References
Erica G Bakker, Christopher Toomajian, Martin Kreitman, Joy Bergelson
A genome-wide survey of R gene polymorphisms in Arabidopsis.
Plant Cell: 2006, 18(8);1803-18
PubMed:16798885
WorldCat.org
DOI
(P p)
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