PRGDB00046815 (disease resistance protein)
disease resistance protein | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 91806729 (DQ446871) |
Gene Class | NL |
Domain Type | LRR, NBS, LRR, Others |
Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGGAGTGTTGCGCCCCTGTCATTGGTGAGATTTTGCGTTTGATGTATGAGTCAACGTTCTCAAGAGTCGCTAATGCCATAAAGTTCAAATCAAACGTCAAAGCTCTTAATGAATCACTCGAGAGATTGACAGAGCTTAAGGGTAACATGAGTGAAGATCATGAAACTTTGCTGACCAAAGATAAACCCTTGAGACTCAAGCTAATGCGTTGGCAAAGAGAGGCGGAAGAAGTTATATCTAAAGCAAGGTTAAAACTTGAGGAACGAGTTTCATGCGGTATGTCCTTGAGACCCAGGATGAGTAGGAAACTTGTCAAGATTCTCGATGAAGTGAAAATGCTTGAGAAGGATGGAATAGAGTTTGTCGACATGCTTTCCGTGGAGTCTACACCGGAAAGAGTTGAACATGTTCCAGGGGTCTCAGTTGTTCATCAAACGATGGCGTCAAATATGTTGGCCAAAATTAGAGATGGCTTGACAAGCGAGAAAGCCCAAAAGATTGGTGTTTGGGGCATGGGAGGAGTAGGTAAAACGACATTGGTCAGGACGCTGAACAATAAGCTTCGGGAAGAGGGTGCTACTCAACCATTTGGCTTGGTGATCTTTGTAATAGTTTCCAAAGAGTTTGATCCAAGAGAAGTCCAAAAGCAGATTGCGGAGAGACTGGATATTGATACCCAAATGGAAGAAAGTGAAGAGAAGTTGGCAAGAAGGATTTATGTTGGACTGATGAAAGAGAGAAAGTTTCTTCTCATTCTTGATGACGTTTGGAAACCCATTGATTTGGATCTTTTAGGCATCCCACGAACTGAAGAGAACAAAGGTTCAAAAGTCATTCTGACTTCGAGGTTTTTAGAGGTCTGTCGCAGCATGAAGACAGATCTTGATGTTAGAGTGGATTGCTTACTTGAAGAAGACGCTTGGGAATTGTTTTGCAAAAATGCAGGGGATGTTGTGAGGTCAGACCATGTTAGGAAGATTGCAAAAGCTGTTTCACAAGAATGTGGTGGATTGCCTCTTGCTATCATCACAGTCGGAACAGCTATGCGGGGAAAGAAAAATGTCAAGCTATGGAATCATGTCTTGAGTAAGCTAAGTAAATCAGTACCTTGGATCAAGAGCATTGAAGAGAAGATCTTCCAGCCATTGAAATTGAGCTACGATTTCTTGGAAGACAAGGCAAAGTTTTGTTTTCTCCTTTGTGCTTTGTTTCCAGAAGACTACTCGATTGAAGTTACAGAGGTTGTAAGATATTGGATGGCTGAAGGATTCATGGAGGAACTCGGTTCCCAAGAGGACTCCATGAACGAGGGAATCACAACTGTGGAGAGTTTAAAGGATTATTGTTTGTTAGAAGATGGTGATCGTAGAGACACGGTGAAGATGCATGATGTTGTCCGCGATTTCGCCATATGGATCATGTCTTCCTCACAAGATGATTCCCATTCCCTTGTCATGTCTGGAACGGGTTTGCAAGATATTAGACAAGATAAGCTTGCTCCTTCTCTTCGAAGGGTTTCTTTGATGAACAATAAACTAGAAAGCCTTCCTGATCTTGTAGAAGAGTTCTGCGTAAAAACCTCAGTCTTACTGCTACAAGGCAATTTTCTTCTAAAGGAAGTACCCATTGGATTCTTGCAAGCATTTCCAACTCTTCGAATCTTGAATCTAAGTGGGACTCGCATTAAGTCATTTCCCAGTTGCTCTCTTTTGCGCCTTTTCAGTCTCCATTCTCTCTTCTTAAGAGATTGTTTTAAACTTGTGAAACTACCTTCACTAGAAACCCTTGCCAAACTTGAGCTACTTGATCTCTGTGGCACACATATCCTCGAATTTCCAAGAGGGTTGGAAGAATTAAAGAGATTCAGACACCTTGATCTTTCACGAACACTTCACCTTGAAAGCATTCCAGCTAGAGTTGTTTCGAGGTTATCAAGTTTGGAGACACTTGACATGACGTCAAGTCACTACCGCTGGAGCGTACAGGGAGAAACACAAAAAGGGCAAGCAACAGTTGAAGAGATAGGATGCCTCCAGCGTTTACAGGTTCTTTCCATCAGGCTCCATTCTTCTCCATTTCTTTTAAATAAGAGAAACACTTGGATCAAAAGATTGAAGAAATTCCAACTTGTAGTTGGGTCTCGTTACATTTTGCGTACAAGGCACGACAAGAGGAGGCTAACAATAAGTCACCTCAACGTATCACAAGTATCCATCGGGTGGCTGTTGGCTTATACAACATCTCTAGCACTAAACCATTGTCAGGGGATCGAAGCAATGATGAAGAAATTGGTAAGTGACAACAAGGGTTTCAAGAATTTGAAATCTCTGACGATTGAGAACGTTATCATCAATACGAATTCTTGGGTTGAGATGGTAAGCACTAACACTTCAAAACAATCCTCTGACATACTAGACCTTCTTCCAAATTTGGAGGAACTTCATCTGCGTCGTGTTGACTTGGAAACCTTCTCAGAGCTACAAACACATCTCGGGTTGAAACTGGAAACACTGAAGATAATCGAGATCACCATGTGTCGCAAGCTTCGAACACTACTCGACAAAAGAAATTTCTTGACTATCCCAAACCTGGAGGAGATAGAGATTAGCTACTGCGACTCTTTGCAGAATCTACACGAGGCTTTGTTATACCATCAACCTTTCGTACCAAATCTACGTGTCTTGAAACTGAGAAATCTTCCAAATCTTGTGAGTATATGCAACTGGGGAGAGGTTTGGGAATGCTTGGAACAAGTGGAAGTGATTCACTGTAATCAGCTGAATTGTTTACCCATAAGCTCTACCTGTGGAAGAATCAAGAAGATAAAAGGAGAATTGAGTTGGTGGGAGCGTTTGGAATGGGACGATCCCTCTGCTTTAACCACTGTTCAACCATTTTTCAATCCAGTGAGGGAAGTTCCTCTACTCATAGCGGATGCAACAACTCAAATGCTATAA
Protein sequences
Name | Description | Sequence |
---|---|---|
disease resistance protein | disease resistance protein [Arabidopsis thaliana]. | MECCAPVIGEILRLMYESTFSRVANAIKFKSNVKALNESLERLTELKGNMSEDHETLLTKDKPLRLKLMRWQREAEEVISKARLKLEERVSCGMSLRPRMSRKLVKILDEVKMLEKDGIEFVDMLSVESTPERVEHVPGVSVVHQTMASNMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNAGDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKLSYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQEDSMNEGITTVESLKDYCLLEDGDRRDTVKMHDVVRDFAIWIMSSSQDDSHSLVMSGTGLQDIRQDKLAPSLRRVSLMNNKLESLPDLVEEFCVKTSVLLLQGNFLLKEVPIGFLQAFPTLRILNLSGTRIKSFPSCSLLRLFSLHSLFLRDCFKLVKLPSLETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPARVVSRLSSLETLDMTSSHYRWSVQGETQKGQATVEEIGCLQRLQVLSIRLHSSPFLLNKRNTWIKRLKKFQLVVGSRYILRTRHDKRRLTISHLNVSQVSIGWLLAYTTSLALNHCQGIEAMMKKLVSDNKGFKNLKSLTIENVIINTNSWVEMVSTNTSKQSSDILDLLPNLEELHLRRVDLETFSELQTHLGLKLETLKIIEITMCRKLRTLLDKRNFLTIPNLEEIEISYCDSLQNLHEALLYHQPFVPNLRVLKLRNLPNLVSICNWGEVWECLEQVEVIHCNQLNCLPISSTCGRIKKIKGELSWWERLEWDDPSALTTVQPFFNPVREVPLLIADATTQML |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR23155 | 13-985 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | RLMYESTFSRVANAIKFKSNVKALNESLERLTELKGNMSEDHETLLTKDKPLRLKLMRWQREAEEVISKARLKLEERVSCGMSLRPRMSRKLVKILDEVKMLEKDGIEFVDMLSVESTPERVEHVPGVSVVHQTMASNMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNAGDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKLSYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQEDSMNEGITTVESLKDYCLLEDGDRRDTVKMHDVVRDFAIWIMSSSQDDSHSLVMSGTGLQDIRQDKLAPSLRRVSLMNNKLESLPDLVEEFCVKTSVLLLQGNFLLKEVPIGFLQAFPTLRILNLSGTRIKSFPSCSLLRLFSLHSLFLRDCFKLVKLPSLETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPARVVSRLSSLETLDMTSSHYRWSVQGETQKGQATVEEIGCLQRLQVLSIRLHSSPFLLNKRNTWIKRLKKFQLVVGSRYILRTRHDKRRLTISHLNVSQVSIGWLLAYTTSLALNHCQGIEAMMKKLVSDNKGFKNLKSLTIENVIINTNSWVEMVSTNTSKQSSDILDLLPNLEELHLRRVDLETFSELQTHLGLKLETLKIIEITMCRKLRTLLDKRNFLTIPNLEEIEISYCDSLQNLHEALLYHQPFVPNLRVLKLRNLPNLVSICNWGEVWECLEQVEVIHCNQLNCLPISSTCGRIKKIKGELSWWERLEWDDPSALTTVQPFFNPVREVPLLIADATTQML |
HMMPanther: PTHR23155:SF108 | 13-985 | PTHR23155:SF108,SUBFAMILY NOT NAMED | RLMYESTFSRVANAIKFKSNVKALNESLERLTELKGNMSEDHETLLTKDKPLRLKLMRWQREAEEVISKARLKLEERVSCGMSLRPRMSRKLVKILDEVKMLEKDGIEFVDMLSVESTPERVEHVPGVSVVHQTMASNMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNAGDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKLSYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQEDSMNEGITTVESLKDYCLLEDGDRRDTVKMHDVVRDFAIWIMSSSQDDSHSLVMSGTGLQDIRQDKLAPSLRRVSLMNNKLESLPDLVEEFCVKTSVLLLQGNFLLKEVPIGFLQAFPTLRILNLSGTRIKSFPSCSLLRLFSLHSLFLRDCFKLVKLPSLETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPARVVSRLSSLETLDMTSSHYRWSVQGETQKGQATVEEIGCLQRLQVLSIRLHSSPFLLNKRNTWIKRLKKFQLVVGSRYILRTRHDKRRLTISHLNVSQVSIGWLLAYTTSLALNHCQGIEAMMKKLVSDNKGFKNLKSLTIENVIINTNSWVEMVSTNTSKQSSDILDLLPNLEELHLRRVDLETFSELQTHLGLKLETLKIIEITMCRKLRTLLDKRNFLTIPNLEEIEISYCDSLQNLHEALLYHQPFVPNLRVLKLRNLPNLVSICNWGEVWECLEQVEVIHCNQLNCLPISSTCGRIKKIKGELSWWERLEWDDPSALTTVQPFFNPVREVPLLIADATTQML |
superfamily: SSF52540 | 124-371 | SSF52540 | MLSVESTPERVEHVPGVSVVHQTMASNMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNAGDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPW |
HMMPfam: PF00931 IPR002182
|
150-426 | NB-ARC,NBS NB-ARC
|
NMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNAGDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKLSYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFME |
Gene3D: G3DSA:3.40.50.300 | 161-266 | G3DSA:3.40.50.300 | SEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLG |
HMMSmart: SM00382 IPR003593
|
163-305 | AAA,NBS AAA+ ATPase domain
|
KAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLDVRVDCLLEE |
FPrintScan: PR00364 IPR000767
|
166-181 | DISEASERSIST Disease resistance protein
|
KIGVWGMGGVGKTTLV |
FPrintScan: PR00364 IPR000767
|
243-257 | DISEASERSIST Disease resistance protein
|
LMKERKFLLILDDVW |
FPrintScan: PR00364 IPR000767
|
335-349 | DISEASERSIST Disease resistance protein
|
CGGLPLAIITVGTAM |
superfamily: SSF52058 | 445-920 | SSF52058,LRR | LKDYCLLEDGDRRDTVKMHDVVRDFAIWIMSSSQDDSHSLVMSGTGLQDIRQDKLAPSLRRVSLMNNKLESLPDLVEEFCVKTSVLLLQGNFLLKEVPIGFLQAFPTLRILNLSGTRIKSFPSCSLLRLFSLHSLFLRDCFKLVKLPSLETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPARVVSRLSSLETLDMTSSHYRWSVQGETQKGQATVEEIGCLQRLQVLSIRLHSSPFLLNKRNTWIKRLKKFQLVVGSRYILRTRHDKRRLTISHLNVSQVSIGWLLAYTTSLALNHCQGIEAMMKKLVSDNKGFKNLKSLTIENVIINTNSWVEMVSTNTSKQSSDILDLLPNLEELHLRRVDLETFSELQTHLGLKLETLKIIEITMCRKLRTLLDKRNFLTIPNLEEIEISYCDSLQNLHEALLYHQPFVPNLRVLKLRNLPNLVSICNWGEVWECLEQVE |
Gene3D: G3DSA:3.80.10.10 | 501-658 | G3DSA:3.80.10.10 | PSLRRVSLMNNKLESLPDLVEEFCVKTSVLLLQGNFLLKEVPIGFLQAFPTLRILNLSGTRIKSFPSCSLLRLFSLHSLFLRDCFKLVKLPSLETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPARVVSRLSSLETLDMTSSHYR |
ProfileScan: PS51450 IPR001611
|
502-523 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLRRVSLMNNKLESLPDLVEEF |
ProfileScan: PS51450 IPR001611
|
551-572 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
TLRILNLSGTRIKSFPSCSLLR |
HMMPfam: PF00560 IPR001611
|
552-569 | LRR_1 Leucine-rich repeat
|
LRILNLSGTRIKSFPSCS |
ProfileScan: PS51450 IPR001611
|
575-597 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLHSLFLRDCFKLVKLPSLETLA |
FPrintScan: PR00364 IPR000767
|
594-610 | DISEASERSIST Disease resistance protein
|
ETLAKLELLDLCGTHIL |
ProfileScan: PS51450 IPR001611
|
598-620 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
KLELLDLCGTHILEFPRGLEELK |
Gene3D: G3DSA:3.80.10.10 | 747-931 | G3DSA:3.80.10.10 | TSLALNHCQGIEAMMKKLVSDNKGFKNLKSLTIENVIINTNSWVEMVSTNTSKQSSDILDLLPNLEELHLRRVDLETFSELQTHLGLKLETLKIIEITMCRKLRTLLDKRNFLTIPNLEEIEISYCDSLQNLHEALLYHQPFVPNLRVLKLRNLPNLVSICNWGEVWECLEQVEVIHCNQLNCLP |
ProfileScan: PS51450 IPR001611
|
810-831 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLEELHLRRVDLETFSELQTHL |
ProfileScan: PS51450 IPR001611
|
848-868 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
KLRTLLDKRNFLTIPNLEEIE |
List of Contributions
There has not been any contribution yet.