PRGDB00046925 (RGH5)

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RGH5
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 16322961 (AY050266)
Gene Class N
Domain Type NBS
Gene Species Theobroma cacao

Comment?

Theobroma cacao isolate D10 disease resistance protein (RGH5) gene, partial cds.

DNA Sequence

GAAGAAGTAGGAATCCCCCAGCCTTCTAACGGGAGTAAGTTAGTGGTAACAACTCGGATGTTGGATGTGTGTCGTTATTTGGAATGTCGAGAAGTTAAAATGCCTACTCTTCCAGAACACGATGCATGGAGTTTGTTCTTGAAGAAAGTAGGTGGAGATGTTTTGAAAAATGAAAGTCTACTACCAATTGCGAAATCTATTGTTGCGCAATGTGCTGGTTTGCCGTTAGCTATTGTTACTGTAGCTAGCAGTATGAAGGGCATAACAAATGTTCATGAATGGAGGAATGCACTAAATGAATTAACTAGATCTGTAAGAGGTGTGACTGGGTTAGATGAAAAGGTACTTCGGCAACTTCAATTTAGCTATGATCATTTAGAATGTGAAAGGGTCCAGCATTGCTTCCTCTGTTGTGC


Protein sequences

Name Description Sequence
disease resistance protein disease resistance protein [Theobroma cacao].

EEVGIPQPSNGSKLVVTTRMLDVCRYLECREVKMPTLPEHDAWSLFLKKVGGDVLKNESLLPIAKSIVAQCAGLPLAIVTVASSMKGITNVHEWRNALNELTRSVRGVTGLDEKVLRQLQFSYDHLECERVQHCFLCCA


Domains

Domain Start-End Description Sequence

HMMPfam: PF00931
IPR002182
5-139 NB-ARC,NBS
NB-ARC

IPQPSNGSKLVVTTRMLDVCRYLECREVKMPTLPEHDAWSLFLKKVGGDVLKNESLLPIAKSIVAQCAGLPLAIVTVASSMKGITNVHEWRNALNELTRSVRGVTGLDEKVLRQLQFSYDHLECERVQHCFLCCA

superfamily: SSF52540
10-107 SSF52540

NGSKLVVTTRMLDVCRYLECREVKMPTLPEHDAWSLFLKKVGGDVLKNESLLPIAKSIVAQCAGLPLAIVTVASSMKGITNVHEWRNALNELTRSVRG


List of References



List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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