PRGDB00046952 (disease resistance protein (CC-NBS-LRR class), putative)
| disease resistance protein (CC-NBS-LRR class), putative | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 18407062 (NM_104800) |
| Gene Class | CNL |
| Domain Type | LRR, NBS, LRR, LRR, Others |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGGGAAATTTTGTGTGTATAGAAATTTCTGGTGATCAAATGCTGGATCGTATCATTAGATGCTTATGTGGTAAAGGTTATATTCGAAACCTCGAGAAGAATCTCAGAGCTCTGCAGAGGGAAATGGAAGATCTAAGAGCAACTCAACATGAGGTACAGAACAAGGTAGCGAGAGAGGAGTCACGCCATCAACAAAGGCTTGAAGCTGTCCAGGTATGGCTTGACCGTGTCAATAGCATTGATATAGAGTGCAAAGATCTGCTAAGTGTTAGTCCCGTTGAGCTTCAAAAGTTGTGTCTCTGCGGTTTATGTTCAAAATATGTATGTTCAAGCTACAAATATGGGAAAAGGGTGTTTTTGTTATTGGAAGAGGTTACGAAACTAAAATCGGAGGGAAATTTTGACGAGGTTTCTCAGCCGCCTCCAAGATCTGAAGTTGAAGAGAGGCCTACTCAGCCTACGATTGGTCAAGAAGAAATGCTCAAAAAGGCATGGAACCGCCTTATGGAAGATGGAGTCGGAATCATGGGTCTGCACGGTATGGGTGGTGTAGGCAAAACAACCCTTTTCAAGAAAATCCACAATAAGTTCGCTGAAACAGGTGGTACGTTTGACATTGTGATCTGGATCGTGGTGTCTCAAGGCGCAAAGCTTTCAAAGCTTCAAGAAGATATTGCAGAGAAATTACACCTTTGTGACGACCTGTGGAAGAACAAGAATGAAAGTGATAAGGCCACCGATATACACAGAGTTTTAAAGGGAAAGAGATTTGTTTTGATGCTAGATGATATATGGGAGAAAGTGGATTTAGAGGCCATTGGTATTCCCTATCCGAGTGAAGTAAATAAATGCAAAGTAGCATTCACCACCCGAGATCAAAAAGTTTGTGGGCAGATGGGGGATCATAAGCCGATGCAAGTCAAATGTTTGGAACCAGAGGATGCATGGGAGTTGTTCAAAAACAAGGTCGGAGACAACACATTACGTAGTGATCCTGTTATTGTGGGGTTGGCAAGAGAGGTCGCTCAAAAATGTCGTGGTCTGCCATTGGCGCTCAGTTGCATTGGTGAGACAATGGCATCTAAAACTATGGTACAAGAATGGGAGCATGCAATCGATGTTTTGACTAGATCCGCTGCAGAGTTTTCTGACATGCAAAACAAAATTCTTCCGATTCTCAAGTACAGCTACGATAGCTTGGAGGATGAACATATCAAGTCGTGTTTCCTATATTGTGCTCTGTTTCCCGAAGATGATAAGATAGATACCAAAACCTTGATAAACAAATGGATCTGCGAAGGATTCATCGGAGAAGACCAAGTTATAAAAAGAGCGAGGAATAAGGGTTATGAGATGCTCGGTACCCTTATCCGTGCTAATTTACTAACAAATGATCGTGGGTTCGTGAAATGGCATGTTGTGATGCATGACGTGGTTCGTGAAATGGCTTTGTGGATTGCATCCGATTTTGGGAAACAGAAAGAGAATTATGTTGTGCGAGCAAGAGTCGGGTTACATGAAATACCAAAAGTCAAGGATTGGGGAGCTGTAAGAAGAATGTCACTAATGATGAATGAAATTGAAGAGATAACATGCGAGTCCAAGTGTTCTGAACTTACAACTTTGTTCCTTCAAAGTAATCAATTGAAGAATCTATCAGGTGAATTCATTCGGTATATGCAAAAGCTAGTTGTTTTGGATCTTTCACATAATCCTGACTTCAATGAACTTCCAGAGCAGATATCGGGGCTGGTCTCGTTGCAGTATCTTGACTTGTCGTGGACAAGAATAGAGCAACTGCCTGTTGGTCTCAAAGAGTTGAAAAAGCTAATTTTTCTGAATTTATGTTTCACCGAGCGACTTTGTAGTATCAGTGGGATATCAAGGTTGTTGAGTTTAAGATGGTTGAGTCTGCGAGAGTCTAATGTTCATGGAGATGCTAGCGTATTGAAGGAGCTGCAGCAATTGGAGAATCTACAAGATCTACGCATAACTGAATCCGCGGAGTTAATTAGTTTGGATCAAAGGTTGGCGAAGTTAATCTCTGTTCTGCGTATTGAGGGGTTTCTTCAAAAGCCATTCGATTTATCATTCCTGGCGAGTATGGAGAATCTTTATGGGCTACTGGTGGAAAATAGTTATTTCTCGGAGATTAATATAAAGTGCAGAGAAAGCGAGACAGAATCGTCTTATTTACACATCAATCCGAAAATTCCATGCTTTACCAACCTCACAGGACTGATTATAATGAAGTGCCATAGCATGAAGGATCTGACTTGGATATTGTTTGCTCCAAATCTTGTCAACCTAGACATTCGTGATTCAAGAGAAGTGGGAGAAATAATAAACAAAGAGAAAGCAATCAATCTTACAAGTATTATTACACCATTTCAGAAACTAGAAAGGTTGTTTTTGTATGGTTTGCCGAAGCTGGAGAGTATCTACTGGAGTCCTCTCCCCTTTCCGCTTTTGTCGAACATAGTTGTTAAATACTGTCCAAAGCTGAGAAAGCTTCCATTAAATGCTACAAGTGTCCCACTAGTTGAAGAATTTGAAATACGTATGGATCCTCCAGAACAGGAAAATGAGCTTGAATGGGAGGACGAAGATACCAAAAATCGATTCTTGCCTTCAATCAAACCGCTAGTACGTCGTCTAAAGATCCATTACTCAGGAATGGGATTCCTCAATGTCAAAAATCAGAATCCACGCTTCTTCTTCTATTGCTTTATCTATCTTCTTGTAGTGCATTTGGATTGTATAATTGATTTGCATTCTGACACTTCTGGAATGTGTTGTGTTGTTCACTTGGATTATGTTTTTCATTTTCCTTTTGTATTCCCTAAAACGTTTTGCATCCTTTTCAGACTACATTTTTACACAATCAAAAGTTTATGCGTTTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein (CC-NBS-LRR class), putative | disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana]. | MGNFVCIEISGDQMLDRIIRCLCGKGYIRNLEKNLRALQREMEDLRATQHEVQNKVAREESRHQQRLEAVQVWLDRVNSIDIECKDLLSVSPVELQKLCLCGLCSKYVCSSYKYGKRVFLLLEEVTKLKSEGNFDEVSQPPPRSEVEERPTQPTIGQEEMLKKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRDQKVCGQMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGEDQVIKRARNKGYEMLGTLIRANLLTNDRGFVKWHVVMHDVVREMALWIASDFGKQKENYVVRARVGLHEIPKVKDWGAVRRMSLMMNEIEEITCESKCSELTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPDFNELPEQISGLVSLQYLDLSWTRIEQLPVGLKELKKLIFLNLCFTERLCSISGISRLLSLRWLSLRESNVHGDASVLKELQQLENLQDLRITESAELISLDQRLAKLISVLRIEGFLQKPFDLSFLASMENLYGLLVENSYFSEINIKCRESETESSYLHINPKIPCFTNLTGLIIMKCHSMKDLTWILFAPNLVNLDIRDSREVGEIINKEKAINLTSIITPFQKLERLFLYGLPKLESIYWSPLPFPLLSNIVVKYCPKLRKLPLNATSVPLVEEFEIRMDPPEQENELEWEDEDTKNRFLPSIKPLVRRLKIHYSGMGFLNVKNQNPRFFFYCFIYLLVVHLDCIIDLHSDTSGMCCVVHLDYVFHFPFVFPKTFCILFRLHFYTIKSLCV |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 6-899 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | CIEISGDQMLDRIIRCLCGKGYIRNLEKNLRALQREMEDLRATQHEVQNKVAREESRHQQRLEAVQVWLDRVNSIDIECKDLLSVSPVELQKLCLCGLCSKYVCSSYKYGKRVFLLLEEVTKLKSEGNFDEVSQPPPRSEVEERPTQPTIGQEEMLKKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRDQKVCGQMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGEDQVIKRARNKGYEMLGTLIRANLLTNDRGFVKWHVVMHDVVREMALWIASDFGKQKENYVVRARVGLHEIPKVKDWGAVRRMSLMMNEIEEITCESKCSELTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPDFNELPEQISGLVSLQYLDLSWTRIEQLPVGLKELKKLIFLNLCFTERLCSISGISRLLSLRWLSLRESNVHGDASVLKELQQLENLQDLRITESAELISLDQRLAKLISVLRIEGFLQKPFDLSFLASMENLYGLLVENSYFSEINIKCRESETESSYLHINPKIPCFTNLTGLIIMKCHSMKDLTWILFAPNLVNLDIRDSREVGEIINKEKAINLTSIITPFQKLERLFLYGLPKLESIYWSPLPFPLLSNIVVKYCPKLRKLPLNATSVPLVEEFEIRMDPPEQENELEWEDEDTKNRFLPSIKPLVRRLKIHYSGMGFLNVK |
| HMMPanther: PTHR23155:SF109 | 6-899 | PTHR23155:SF109,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) | CIEISGDQMLDRIIRCLCGKGYIRNLEKNLRALQREMEDLRATQHEVQNKVAREESRHQQRLEAVQVWLDRVNSIDIECKDLLSVSPVELQKLCLCGLCSKYVCSSYKYGKRVFLLLEEVTKLKSEGNFDEVSQPPPRSEVEERPTQPTIGQEEMLKKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRDQKVCGQMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGEDQVIKRARNKGYEMLGTLIRANLLTNDRGFVKWHVVMHDVVREMALWIASDFGKQKENYVVRARVGLHEIPKVKDWGAVRRMSLMMNEIEEITCESKCSELTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPDFNELPEQISGLVSLQYLDLSWTRIEQLPVGLKELKKLIFLNLCFTERLCSISGISRLLSLRWLSLRESNVHGDASVLKELQQLENLQDLRITESAELISLDQRLAKLISVLRIEGFLQKPFDLSFLASMENLYGLLVENSYFSEINIKCRESETESSYLHINPKIPCFTNLTGLIIMKCHSMKDLTWILFAPNLVNLDIRDSREVGEIINKEKAINLTSIITPFQKLERLFLYGLPKLESIYWSPLPFPLLSNIVVKYCPKLRKLPLNATSVPLVEEFEIRMDPPEQENELEWEDEDTKNRFLPSIKPLVRRLKIHYSGMGFLNVK |
| superfamily: SSF52540 | 136-381 | SSF52540 | EVSQPPPRSEVEERPTQPTIGQEEMLKKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRDQKVCGQMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAE |
| HMMPfam: PF00931 IPR002182
|
157-439 | NB-ARC,NBS NB-ARC
|
QEEMLKKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRDQKVCGQMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGED |
| Gene3D: G3DSA:3.40.50.300 | 163-266 | G3DSA:3.40.50.300 | KAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDDIWE |
| FPrintScan: PR00364 IPR000767
|
175-190 | DISEASERSIST Disease resistance protein
|
IMGLHGMGGVGKTTLF |
| FPrintScan: PR00364 IPR000767
|
251-265 | DISEASERSIST Disease resistance protein
|
VLKGKRFVLMLDDIW |
| FPrintScan: PR00364 IPR000767
|
345-359 | DISEASERSIST Disease resistance protein
|
CRGLPLALSCIGETM |
| superfamily: SSF52058 | 474-856 | SSF52058,LRR | VMHDVVREMALWIASDFGKQKENYVVRARVGLHEIPKVKDWGAVRRMSLMMNEIEEITCESKCSELTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPDFNELPEQISGLVSLQYLDLSWTRIEQLPVGLKELKKLIFLNLCFTERLCSISGISRLLSLRWLSLRESNVHGDASVLKELQQLENLQDLRITESAELISLDQRLAKLISVLRIEGFLQKPFDLSFLASMENLYGLLVENSYFSEINIKCRESETESSYLHINPKIPCFTNLTGLIIMKCHSMKDLTWILFAPNLVNLDIRDSREVGEIINKEKAINLTSIITPFQKLERLFLYGLPKLESIYWSPLPFPLLSNIVVKYCPKLRKLPLNATSVPLVEEFEIRMD |
| Gene3D: G3DSA:3.80.10.10 | 504-664 | G3DSA:3.80.10.10 | GLHEIPKVKDWGAVRRMSLMMNEIEEITCESKCSELTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPDFNELPEQISGLVSLQYLDLSWTRIEQLPVGLKELKKLIFLNLCFTERLCSISGISRLLSLRWLSLRESNVHGDASVLKELQQLENLQDLRI |
| HMMPfam: PF13855 | 538-597 | LRR_8,Leucine rich repeat | ELTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPDFNELPEQISGLVSLQYLDLSWTRI |
| FPrintScan: PR00364 IPR000767
|
558-574 | DISEASERSIST Disease resistance protein
|
RYMQKLVVLDLSHNPDF |
| Gene3D: G3DSA:3.80.10.10 | 738-837 | G3DSA:3.80.10.10 | IPCFTNLTGLIIMKCHSMKDLTWILFAPNLVNLDIRDSREVGEIINKEKAINLTSIITPFQKLERLFLYGLPKLESIYWSPLPFPLLSNIVVKYCPKLRK |
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