PRGDB00047068 (disease resistance protein (NBS-LRR class), putative)
| disease resistance protein (NBS-LRR class), putative | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 18416947 (NM_118856) |
| Gene Class | NL |
| Domain Type | LRR, NBS, LRR, Others |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGTTCAGATCGAACGCAAGAGCGTTGAATAGAGCATTGGAGAGACTAAAGAATGTGCAGACCAAGGTGAATGAAGCTCTTAAGAGATCAGGGATCCAAGAGAAATCTTTGGAGCGAAAGCTGAGGATATGGCTAAGAAAGGTCGAAGAGAATGTGCCTCTTGGTGAGCTGATTTTGGAGAAACGCTCTTCATGTGCTATATGGCTGAGCGACAAAGATGTGGAAATTCTTGAGAAAGTCAAAAGGCTGGAGGAGCAAGGCCAAGATCTCATAAAAAAGATTTCAGTCAACAAGTCATCTAGAGAAATAGTTGAACGGGTCTTGGGGCCTTCATTTCATCCTCAAAAAACAGCACTGGAGATGTTGGATAAGCTAAAGGATTGTTTGAAGAAGAAGAATGTTCAAAAGATTGGTGTTTGGGGTATGGGCGGTGTTGGGAAGACAACACTTGTCAGGACGCTTAACAATGATCTCTTGAAATATGCTGCTACTCAACAGTTTGCTTTGGTAATTTGGGTGACAGTGTCGAAAGATTTTGACTTAAAAAGGGTCCAGATGGACATAGCCAAGAGACTGGGCAAGCGATTTACAAGGGAGCAAATGAATCAGCTAGGCTTAACTATTTGTGAGAGGCTAATAGATTTGAAAAATTTCCTCCTTATTCTTGACGATGTTTGGCACCCCATTGATTTGGACCAATTGGGTATTCCATTAGCATTGGAACGATCGAAGGATTCAAAGGTTGTTCTAACTTCAAGAAGACTAGAAGTGTGCCAACAGATGATGACTAATGAAAACATCAAAGTTGCATGCTTACAAGAGAAAGAAGCTTGGGAATTGTTTTGCCACAACGTTGGAGAAGTAGCAAACTCTGATAATGTTAAGCCCATTGCAAAGGATGTATCCCATGAATGTTGTGGATTGCCTTTGGCTATCATCACAATCGGGCGGACCCTGCGCGGAAAACCTCAAGTCGAGGTATGGAAACACACCTTGAATTTGCTAAAGAGATCAGCACCTTCTATCGATACTGAAGAAAAGATCTTTGGTACTTTAAAACTCAGCTACGACTTTCTTCAAGACAATATGAAAAGTTGCTTCCTTTTCTGTGCTTTATTTCCGGAGGACTACTCTATCAAAGTAAGTGAACTAATAATGTACTGGGTCGCGGAAGGATTGTTGGATGGACAACATCATTACGAGGACATGATGAATGAGGGAGTTACTTTGGTTGAGAGATTGAAGGACTCTTGCCTGTTAGAAGATGGTGATAGTTGTGATACAGTTAAAATGCACGATGTTGTGCGTGACTTTGCTATATGGTTCATGTCTTCTCAGGGTGAAGGATTTCATTCTCTTGTCATGGCCGGGAGAGGTCTAATAGAGTTTCCACAAGATAAGTTTGTTTCTTCAGTCCAGAGAGTTTCTTTGATGGCTAATAAGCTAGAAAGACTACCTAATAATGTGATAGAGGGTGTGGAAACATTAGTTTTACTACTACAAGGGAATTCCCATGTTAAGGAAGTTCCTAATGGGTTCTTACAAGCATTCCCAAACCTTAGAATCTTGGATCTCAGTGGTGTTCGTATAAGAACATTGCCAGACTCCTTTTCAAATCTTCATAGTTTGCGGTCTCTTGTGTTAAGAAACTGTAAAAAATTGAGGAACCTGCCTTCGCTAGAATCCCTTGTTAAACTCCAATTTCTTGATCTACATGAATCTGCCATTAGGGAACTTCCGAGAGGTCTTGAAGCGTTGAGCAGCTTAAGATACATTTGCGTTTCCAACACATATCAACTCCAGAGCATTCCGGCTGGAACTATTCTCCAGTTATCAAGTTTGGAGGTTCTAGACATGGCGGGGAGTGCTTATAGTTGGGGCATCAAGGGAGAAGAAAGAGAAGGACAAGCAACACTTGACGAGGTTACATGCCTCCCTCATTTGCAGTTTCTTGCCATTAAGCTCCTCGATGTCTTGTCCTTTTCCTATGAATTTGATTCTTTGACCAAAAGGCTAACAAAGTTCCAGTTTCTATTTTCACCTATTCGATCGGTTTCACCTCCTGGCACCGGTGAAGGTTGCCTAGCAATCAGTGATGTCAATGTCTCAAATGCATCTATTGGGTGGCTACTGCAACATGTGACATCACTAGACTTGAACTATTGTGAGGGTCTTAATGGTATGTTCGAGAACTTGGTAACGAAGAGCAAAAGTAGCTTTGTTGCCATGAAAGCACTGTCCATTCACTATTTTCCCAGCTTAAGCCTTGCGAGTGGTTGTGAGTCCCAACTGGATCTCTTTCCAAATCTCGAGGAACTTTCTTTGGACAATGTCAATCTGGAAAGCATCGGAGAACTTAATGGTTTCCTCGGGATGAGACTTCAGAAACTAAAACTACTTCAAGTCTCTGGCTGCCGACAGCTTAAACGTCTTTTCTCAGACCAAATCTTAGCAGGTACTCTGCCAAACCTACAAGAGATAAAGGTTGTCTCATGTTTGAGGTTGGAGGAGCTCTTCAATTTTTCTTCAGTGCCAGTTGATTTTTGTGCTGAGTCTTTGCTACCTAAGCTAACTGTCATAAAACTCAAATATCTTCCACAATTAAGGAGCTTATGCAACGACAGAGTGGTGCTCGAATCCCTGGAACACTTAGAAGTCGAATCTTGTGAAAGTTTAAAGAACTTACCCTTTGTCCCCGGCAATACTGGTATGATCAACGAACAAATGGCGTGGGAATACATGTCTAGGACTCTAGGGTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein (NBS-LRR class), putative | disease resistance protein (NBS-LRR class), putative [Arabidopsis thaliana]. | MFRSNARALNRALERLKNVQTKVNEALKRSGIQEKSLERKLRIWLRKVEENVPLGELILEKRSSCAIWLSDKDVEILEKVKRLEEQGQDLIKKISVNKSSREIVERVLGPSFHPQKTALEMLDKLKDCLKKKNVQKIGVWGMGGVGKTTLVRTLNNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRLGKRFTREQMNQLGLTICERLIDLKNFLLILDDVWHPIDLDQLGIPLALERSKDSKVVLTSRRLEVCQQMMTNENIKVACLQEKEAWELFCHNVGEVANSDNVKPIAKDVSHECCGLPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCFLFCALFPEDYSIKVSELIMYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSCLLEDGDSCDTVKMHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQDKFVSSVQRVSLMANKLERLPNNVIEGVETLVLLLQGNSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSLVLRNCKKLRNLPSLESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQLQSIPAGTILQLSSLEVLDMAGSAYSWGIKGEEREGQATLDEVTCLPHLQFLAIKLLDVLSFSYEFDSLTKRLTKFQFLFSPIRSVSPPGTGEGCLAISDVNVSNASIGWLLQHVTSLDLNYCEGLNGMFENLVTKSKSSFVAMKALSIHYFPSLSLASGCESQLDLFPNLEELSLDNVNLESIGELNGFLGMRLQKLKLLQVSGCRQLKRLFSDQILAGTLPNLQEIKVVSCLRLEELFNFSSVPVDFCAESLLPKLTVIKLKYLPQLRSLCNDRVVLESLEHLEVESCESLKNLPFVPGNTGMINEQMAWEYMSRTLG |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 4-901 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | SNARALNRALERLKNVQTKVNEALKRSGIQEKSLERKLRIWLRKVEENVPLGELILEKRSSCAIWLSDKDVEILEKVKRLEEQGQDLIKKISVNKSSREIVERVLGPSFHPQKTALEMLDKLKDCLKKKNVQKIGVWGMGGVGKTTLVRTLNNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRLGKRFTREQMNQLGLTICERLIDLKNFLLILDDVWHPIDLDQLGIPLALERSKDSKVVLTSRRLEVCQQMMTNENIKVACLQEKEAWELFCHNVGEVANSDNVKPIAKDVSHECCGLPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCFLFCALFPEDYSIKVSELIMYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSCLLEDGDSCDTVKMHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQDKFVSSVQRVSLMANKLERLPNNVIEGVETLVLLLQGNSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSLVLRNCKKLRNLPSLESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQLQSIPAGTILQLSSLEVLDMAGSAYSWGIKGEEREGQATLDEVTCLPHLQFLAIKLLDVLSFSYEFDSLTKRLTKFQFLFSPIRSVSPPGTGEGCLAISDVNVSNASIGWLLQHVTSLDLNYCEGLNGMFENLVTKSKSSFVAMKALSIHYFPSLSLASGCESQLDLFPNLEELSLDNVNLESIGELNGFLGMRLQKLKLLQVSGCRQLKRLFSDQILAGTLPNLQEIKVVSCLRLEELFNFSSVPVDFCAESLLPKLTVIKLKYLPQLRSLCNDRVVLESLEHLEVESCESLKNLPFVPGN |
| HMMPfam: PF00931 IPR002182
|
121-395 | NB-ARC,NBS NB-ARC
|
MLDKLKDCLKKKNVQKIGVWGMGGVGKTTLVRTLNNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRLGKRFTREQMNQLGLTICERLIDLKNFLLILDDVWHPIDLDQLGIPLALERSKDSKVVLTSRRLEVCQQMMTNENIKVACLQEKEAWELFCHNVGEVANSDNVKPIAKDVSHECCGLPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCFLFCALFPEDYSIKVSELIMYWVAEGLLD |
| superfamily: SSF52540 | 122-341 | SSF52540 | LDKLKDCLKKKNVQKIGVWGMGGVGKTTLVRTLNNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRLGKRFTREQMNQLGLTICERLIDLKNFLLILDDVWHPIDLDQLGIPLALERSKDSKVVLTSRRLEVCQQMMTNENIKVACLQEKEAWELFCHNVGEVANSDNVKPIAKDVSHECCGLPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPS |
| Gene3D: G3DSA:3.40.50.300 | 124-259 | G3DSA:3.40.50.300 | KLKDCLKKKNVQKIGVWGMGGVGKTTLVRTLNNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRLGKRFTREQMNQLGLTICERLIDLKNFLLILDDVWHPIDLDQLGIPLALERSKDSKVVLTSRRLEVCQ |
| FPrintScan: PR00364 IPR000767
|
136-151 | DISEASERSIST Disease resistance protein
|
KIGVWGMGGVGKTTLV |
| FPrintScan: PR00364 IPR000767
|
212-226 | DISEASERSIST Disease resistance protein
|
LIDLKNFLLILDDVW |
| FPrintScan: PR00364 IPR000767
|
305-319 | DISEASERSIST Disease resistance protein
|
CCGLPLAIITIGRTL |
| superfamily: SSF52058 | 430-890 | SSF52058,LRR | KMHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQDKFVSSVQRVSLMANKLERLPNNVIEGVETLVLLLQGNSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSLVLRNCKKLRNLPSLESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQLQSIPAGTILQLSSLEVLDMAGSAYSWGIKGEEREGQATLDEVTCLPHLQFLAIKLLDVLSFSYEFDSLTKRLTKFQFLFSPIRSVSPPGTGEGCLAISDVNVSNASIGWLLQHVTSLDLNYCEGLNGMFENLVTKSKSSFVAMKALSIHYFPSLSLASGCESQLDLFPNLEELSLDNVNLESIGELNGFLGMRLQKLKLLQVSGCRQLKRLFSDQILAGTLPNLQEIKVVSCLRLEELFNFSSVPVDFCAESLLPKLTVIKLKYLPQLRSLCNDRVVLESLEHLEVESCE |
| Gene3D: G3DSA:3.80.10.10 | 468-716 | G3DSA:3.80.10.10 | FVSSVQRVSLMANKLERLPNNVIEGVETLVLLLQGNSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSLVLRNCKKLRNLPSLESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQLQSIPAGTILQLSSLEVLDMAGSAYSWGIKGEEREGQATLDEVTCLPHLQFLAIKLLDVLSFSYEFDSLTKRLTKFQFLFSPIRSVSPPGTGEGCLAISDVNVSNASIGWLLQHVTS |
| HMMPfam: PF13855 | 498-552 | LRR_8,Leucine rich repeat | LLLQGNSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSLVLRNCK |
| Gene3D: G3DSA:3.80.10.10 | 717-896 | G3DSA:3.80.10.10 | LDLNYCEGLNGMFENLVTKSKSSFVAMKALSIHYFPSLSLASGCESQLDLFPNLEELSLDNVNLESIGELNGFLGMRLQKLKLLQVSGCRQLKRLFSDQILAGTLPNLQEIKVVSCLRLEELFNFSSVPVDFCAESLLPKLTVIKLKYLPQLRSLCNDRVVLESLEHLEVESCESLKNLP |
| FPrintScan: PR00364 IPR000767
|
792-808 | DISEASERSIST Disease resistance protein
|
MRLQKLKLLQVSGCRQL |
List of Contributions
There has not been any contribution yet.
