PRGDB00047149 (putative disease resistance protein)
| putative disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 57164474 (AC114983) |
| Gene Class | NL |
| Domain Type | LRR, NBS, Others |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
AATCCAAAGAATTATTCTTGCGGAGATTGTTTGGCCAGTTACATGAGTGCCCACAAAACATACAGAAAGTTTCAGAAAGCGTCTTGAAGAAATGCGGTGGTATGCCTCTAGCTATCAATAGTATAGCTGGGCTTTTGGCTTGTAGGCCTGTTAAGAGCTTAGAAGAAATGCAGAACTTACAAAACTCTCTTGGATCTGAGATGGATTCTTTCTCAACCATGGAGAAAATAAAGCAGATACTACTATTAAGTTACAATGATTTACCCTACCATTTGAAGACATGCTTCTTGTATTTTAGTATCTTCCCAGAGGACTACAAGATTAAAAGGAAAAATGTTGTCCGGCAATGGGTGGCAGAGGGATTTGTATCAGACAAGCGGGGACAATCTGCGGAGCAAGTTGCTGAGAGCTATTTTGCAGAGTTTATCAATAGGAGTATAGTCCAACCTTTAGATATAAGTGACAGCGGAAAGGTTAAGACTTGCAGGATCCATGATATAATGTTGGAGGTCATTGTAGAGATGTCTGTTGAACAAAATTTTATTTCACTTATGGGGGATCAACATACAATGATTTCCTATGACAAGGTTCGACGTCTTTCCTTACATGGCCATGGTGCATATAATCTATCAACTAGCTTGGAATTATCACATATCCGATCCCTAAGCTCCTTTGGGGATATGCCAAGAGCTTTGCGCTTTGACCGTGCAAGATTGCTCAGAGTGTTAGATCTAGAAAGCTGTGAATTTCTGAGGAATCGTCAACATCATCATATTTGTGCATTGTTCCATCTAAAGTACCTCAGTCTAAGAAGAGCTCACAACATAGATAGGCTCCCAAGAAAAATAAAGAAATTGCAGAGCTTGGAAACTCTAGATTTAAGGGGTAAAGGTATAGATAAGTTACCTGCTAGTTTCATTGAACTGGAGAATTTGGTCCATTTCCGTTCAGGTTCTACCTACTTGCCGCATGGCTTTGGGAGAATGAAAAGCATACTAACATTGGGATTGATAGAGATCTCAGATGACACATCTTGGAGGATACAAGAAATTGGCTGCTTGATGCAACTGGAGAAGCTCTGCATATGGTCACGCGATGGCATGAACAAGGAGAACTGGGAGTCCCTACTCACCGTCATTGAGAACTTAAGCAGGCGCCTCCTGTCACTCTCAATTGAAACGGACAGGAGAACTTGTTCTTTGCCACTTGATTTCTCATCCTCCCCACCTCTTCTCCTGCGAAGCCTCCTGTTATATGGAAGTTTGGAAGCATTGCCAAGTTGGATGGCATCGCTGGATAACCTTGTGAAATTAACTCTTGGTGGTACTAAATTAGAGGAGGATGATATACAGATTCTCCAGAAGCTCCCACGATTGTTTTCTCTTAGACTGTGGTTTGCATTTGCCGTAGAGAAGTTTGTTGTTGCGCCCTGAATGGAAAGTGTCGTTGTTACTGCTGCTGAGGGTGCTGTGAAAACACTGCTGGGTAAACTGGGCTCTTTTCTTTCGCAAGAGCCCCGACTTCTTGGTGGGGTCAGAGGTGAGTTGCAATACATCAAGGATGAACTTGAGAGCATGAACGCATTCCTCCAGAACCTTGCAGCCACAAGCAGCCACAGTGTCCAAGTGAAGATCTGGATGAAGCAAGTCAGAGAGATGGCTTATGACGCTGAGGACTGCATTGATGAGTTCCAACACCACTTTGGTGGCTATTGTGGTAATGGTATTGTAGGGTTTATATATAGGATGAAGCATCTTATGTACACTCTGAAGGTCCGCCATCGAATTGTCATGCAAGTGCAAGAGCTTAAGGTTCGTGCTCGAGATGTTAGTGACAGGTATGCGAGATATAGCGGTGCTAATGCTATTGTTGATGCCTCTGACTCGAAGAATACCACCACTTCAATCTCAACCTGTTTGTCCCTTGACCCTAGGCAAGTTATTGGTTTTATACAGGATGATCTACTTGTGGGAATCAACAATCGGAGGGACAGGGTCCTAACATATCTAAGAGTGGACAGTGATCAAGAACTAAGGGTAATATCAATTTTTGGCTTTGGAGGATTGGGCAAGACTACCCTTGCCAAGGCAATATATGATAGTCCACAGGTAAAGAATGGTCAGTTCCATTGTCAAGCTTTTGTTACCGTATCCCAGAAAATTGATCTAAAGGCTCTATTGAGAGACATGCTTGGGCAGCTTATTCCACCTGCTTCTGATCAACATGTCAGCTCAGACATTGAGGATGAACATCTCAAAGCTATTGAAGTATGGGATGTGAAAAGACTTGGCGACAAACTACGTTCATTATTCTTGATGATATTTG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| putative disease resistance protein | putative disease resistance protein [Oryza sativa (japonica cultivar-group)]. | MESVVVTAAEGAVKTLLGKLGSFLSQEPRLLGGVRGELQYIKDELESMNAFLQNLAATSSHSVQVKIWMKQVREMAYDAEDCIDEFQHHFGGYCGNGIVGFIYRMKHLMYTLKVRHRIVMQVQELKVRARDVSDRYARYSGANAIVDASDSKNTTTSISTCLSLDPRQVIGFIQDDLLVGINNRRDRVLTYLRVDSDQELRVISIFGFGGLGKTTLAKAIYDSPQVKNGQFHCQAFVTVSQKIDLKALLRDMLGQLIPPASDQHVSSDIEDEHLKAIEVWDVKRLGDKLRSLFLMIFESKELFLRRLFGQLHECPQNIQKVSESVLKKCGGMPLAINSIAGLLACRPVKSLEEMQNLQNSLGSEMDSFSTMEKIKQILLLSYNDLPYHLKTCFLYFSIFPEDYKIKRKNVVRQWVAEGFVSDKRGQSAEQVAESYFAEFINRSIVQPLDISDSGKVKTCRIHDIMLEVIVEMSVEQNFISLMGDQHTMISYDKVRRLSLHGHGAYNLSTSLELSHIRSLSSFGDMPRALRFDRARLLRVLDLESCEFLRNRQHHHICALFHLKYLSLRRAHNIDRLPRKIKKLQSLETLDLRGKGIDKLPASFIELENLVHFRSGSTYLPHGFGRMKSILTLGLIEISDDTSWRIQEIGCLMQLEKLCIWSRDGMNKENWESLLTVIENLSRRLLSLSIETDRRTCSLPLDFSSSPPLLLRSLLLYGSLEALPSWMASLDNLVKLTLGGTKLEEDDIQILQKLPRLFSLRLWFAFAVEKFVVAP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF150 | 9-762 | PTHR23155:SF150,OS06G0158300 PROTEIN | AEGAVKTLLGKLGSFLSQEPRLLGGVRGELQYIKDELESMNAFLQNLAATSSHSVQVKIWMKQVREMAYDAEDCIDEFQHHFGGYCGNGIVGFIYRMKHLMYTLKVRHRIVMQVQELKVRARDVSDRYARYSGANAIVDASDSKNTTTSISTCLSLDPRQVIGFIQDDLLVGINNRRDRVLTYLRVDSDQELRVISIFGFGGLGKTTLAKAIYDSPQVKNGQFHCQAFVTVSQKIDLKALLRDMLGQLIPPASDQHVSSDIEDEHLKAIEVWDVKRLGDKLRSLFLMIFESKELFLRRLFGQLHECPQNIQKVSESVLKKCGGMPLAINSIAGLLACRPVKSLEEMQNLQNSLGSEMDSFSTMEKIKQILLLSYNDLPYHLKTCFLYFSIFPEDYKIKRKNVVRQWVAEGFVSDKRGQSAEQVAESYFAEFINRSIVQPLDISDSGKVKTCRIHDIMLEVIVEMSVEQNFISLMGDQHTMISYDKVRRLSLHGHGAYNLSTSLELSHIRSLSSFGDMPRALRFDRARLLRVLDLESCEFLRNRQHHHICALFHLKYLSLRRAHNIDRLPRKIKKLQSLETLDLRGKGIDKLPASFIELENLVHFRSGSTYLPHGFGRMKSILTLGLIEISDDTSWRIQEIGCLMQLEKLCIWSRDGMNKENWESLLTVIENLSRRLLSLSIETDRRTCSLPLDFSSSPPLLLRSLLLYGSLEALPSWMASLDNLVKLTLGGTKLEEDDIQILQKLPRLFSLRLW |
| HMMPanther: PTHR23155 | 9-762 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | AEGAVKTLLGKLGSFLSQEPRLLGGVRGELQYIKDELESMNAFLQNLAATSSHSVQVKIWMKQVREMAYDAEDCIDEFQHHFGGYCGNGIVGFIYRMKHLMYTLKVRHRIVMQVQELKVRARDVSDRYARYSGANAIVDASDSKNTTTSISTCLSLDPRQVIGFIQDDLLVGINNRRDRVLTYLRVDSDQELRVISIFGFGGLGKTTLAKAIYDSPQVKNGQFHCQAFVTVSQKIDLKALLRDMLGQLIPPASDQHVSSDIEDEHLKAIEVWDVKRLGDKLRSLFLMIFESKELFLRRLFGQLHECPQNIQKVSESVLKKCGGMPLAINSIAGLLACRPVKSLEEMQNLQNSLGSEMDSFSTMEKIKQILLLSYNDLPYHLKTCFLYFSIFPEDYKIKRKNVVRQWVAEGFVSDKRGQSAEQVAESYFAEFINRSIVQPLDISDSGKVKTCRIHDIMLEVIVEMSVEQNFISLMGDQHTMISYDKVRRLSLHGHGAYNLSTSLELSHIRSLSSFGDMPRALRFDRARLLRVLDLESCEFLRNRQHHHICALFHLKYLSLRRAHNIDRLPRKIKKLQSLETLDLRGKGIDKLPASFIELENLVHFRSGSTYLPHGFGRMKSILTLGLIEISDDTSWRIQEIGCLMQLEKLCIWSRDGMNKENWESLLTVIENLSRRLLSLSIETDRRTCSLPLDFSSSPPLLLRSLLLYGSLEALPSWMASLDNLVKLTLGGTKLEEDDIQILQKLPRLFSLRLW |
| superfamily: SSF52540 | 161-367 | SSF52540 | CLSLDPRQVIGFIQDDLLVGINNRRDRVLTYLRVDSDQELRVISIFGFGGLGKTTLAKAIYDSPQVKNGQFHCQAFVTVSQKIDLKALLRDMLGQLIPPASDQHVSSDIEDEHLKAIEVWDVKRLGDKLRSLFLMIFESKELFLRRLFGQLHECPQNIQKVSESVLKKCGGMPLAINSIAGLLACRPVKSLEEMQNLQNSLGSEMDS |
| HMMPfam: PF00931 IPR002182
|
186-273 | NB-ARC,NBS NB-ARC
|
DRVLTYLRVDSDQELRVISIFGFGGLGKTTLAKAIYDSPQVKNGQFHCQAFVTVSQKIDLKALLRDMLGQLIPPASDQHVSSDIEDEH |
| Gene3D: G3DSA:3.40.50.300 | 192-252 | G3DSA:3.40.50.300 | LRVDSDQELRVISIFGFGGLGKTTLAKAIYDSPQVKNGQFHCQAFVTVSQKIDLKALLRDM |
| FPrintScan: PR00364 IPR000767
|
202-217 | DISEASERSIST Disease resistance protein
|
VISIFGFGGLGKTTLA |
| Gene3D: G3DSA:3.40.50.300 | 272-332 | G3DSA:3.40.50.300 | EHLKAIEVWDVKRLGDKLRSLFLMIFESKELFLRRLFGQLHECPQNIQKVSESVLKKCGGM |
| HMMPfam: PF00931 IPR002182
|
294-422 | NB-ARC,NBS NB-ARC
|
LMIFESKELFLRRLFGQLHECPQNIQKVSESVLKKCGGMPLAINSIAGLLACRPVKSLEEMQNLQNSLGSEMDSFSTMEKIKQILLLSYNDLPYHLKTCFLYFSIFPEDYKIKRKNVVRQWVAEGFVSD |
| FPrintScan: PR00364 IPR000767
|
329-343 | DISEASERSIST Disease resistance protein
|
CGGMPLAINSIAGLL |
| Gene3D: G3DSA:3.80.10.10 | 492-637 | G3DSA:3.80.10.10 | DKVRRLSLHGHGAYNLSTSLELSHIRSLSSFGDMPRALRFDRARLLRVLDLESCEFLRNRQHHHICALFHLKYLSLRRAHNIDRLPRKIKKLQSLETLDLRGKGIDKLPASFIELENLVHFRSGSTYLPHGFGRMKSILTLGLIEI |
| superfamily: SSF52047 | 492-762 | SSF52047,LRR | DKVRRLSLHGHGAYNLSTSLELSHIRSLSSFGDMPRALRFDRARLLRVLDLESCEFLRNRQHHHICALFHLKYLSLRRAHNIDRLPRKIKKLQSLETLDLRGKGIDKLPASFIELENLVHFRSGSTYLPHGFGRMKSILTLGLIEISDDTSWRIQEIGCLMQLEKLCIWSRDGMNKENWESLLTVIENLSRRLLSLSIETDRRTCSLPLDFSSSPPLLLRSLLLYGSLEALPSWMASLDNLVKLTLGGTKLEEDDIQILQKLPRLFSLRLW |
| FPrintScan: PR00364 IPR000767
|
532-548 | DISEASERSIST Disease resistance protein
|
DRARLLRVLDLESCEFL |
| Gene3D: G3DSA:3.80.10.10 | 718-761 | G3DSA:3.80.10.10 | SLEALPSWMASLDNLVKLTLGGTKLEEDDIQILQKLPRLFSLRL |
List of Contributions
There has not been any contribution yet.
