PRGDB00047219 (CTV.4)
| CTV.4 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 160693177 (EU254155) |
| Gene Class | Unknown |
| Domain Type | LRR, LRR, LRR, LRR, LRR, LRR, LRR, LRR, LRR, LRR, LRR |
| Gene Species | Citrus reticulata |
DNA Sequence
GCTTCCTACATGCCCTCATCTCCTTACTTTATTTCTCAACAATAACGAACTCTTACGGAGAATCAACAGTGACTTCTTGCAGTCTATGCCTAGTCTCAAAGTTTTAAACCTCTCACATTACATGGGATTATGGGTCTTACCTTTGGGAATTTCAAAGTTGGTTTCACTTGAACACCTTGATCTTTCCACCTCACTTATATCTGAGATTCCTGAAGAGTTAAAGGCGTTGGTAAATCTTAAATGTCTGAATTTGGAAAACACTGGTCGTTTATTAAAAATTCCTCTGCAACTACTATCTAATTTTTCAAGGTTACATGTGCTGAGAATGTTCGGTAATGGTTATTTTTCGTGTGGCGATTATCCAATAGAAAGTGTTTTGTTCGGTGGGGGAGAACTCTTAGTAGAGGAGTTGCTTGGTCTGAAACATCTAGAGGTATTGAGCTTGACCTTGGGAAGTTCTCGTGCCCTCCAAAGTTTTTTGAACTCACATAAGTTACGAAGTTGTACTCAAGCTATGCTCCTCCAAGACTTCGAAGGTTCGACTTCGGTTGATGTTCCTGGCTTGGCAAATCTGAAGCAGCTAAAAAGATTACGGATTTCAGACTATTATGAATTGGTGGAATTGAAGATTGATTATGCAGGGGAAGTACAACGTTATGGTTTCCACAGCCTTCAGAGTTTTGAAGTAAACTTTTGCTCTCAAGTGAAGGACTTGACACTCCTTGTTTTGATTCCAAACCTCAAGTTCATTGAAGTAACAGATTGCGCGGCTATGGAAGAAATCACAAGTGTGGGAGAATTTGCTGGAAATCCAAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR type disease resistance protein | NBS-LRR type disease resistance protein [Citrus reticulata]. | LPTCPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGNGYFSCGDYPIESVLFGGGELLVEELLGLKHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCAAMEEITSVGEFAGNP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52058 | 1-262 | SSF52058,LRR | LPTCPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGNGYFSCGDYPIESVLFGGGELLVEELLGLKHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCAAMEEIT |
| Gene3D: G3DSA:3.80.10.10 | 3-112 | G3DSA:3.80.10.10 | TCPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGN |
| HMMPanther: PTHR23155 | 4-261 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | CPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGNGYFSCGDYPIESVLFGGGELLVEELLGLKHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCAAMEEI |
| HMMPanther: PTHR23155:SF108 | 4-261 | PTHR23155:SF108,SUBFAMILY NOT NAMED | CPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGNGYFSCGDYPIESVLFGGGELLVEELLGLKHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCAAMEEI |
| Gene3D: G3DSA:3.80.10.10 | 141-256 | G3DSA:3.80.10.10 | KHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCA |
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