PRGDB00047221 (CTV.4)
| CTV.4 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 160693173 (EU254153) |
| Gene Class | Unknown |
| Domain Type | LRR, LRR, LRR, LRR, LRR, LRR, LRR, LRR, LRR, LRR, LRR |
| Gene Species | Citrus reticulata |
DNA Sequence
GGTTCCTACATGCCCTCATCTCCTTACTTTATTTCTCAACAATAACGAACTCTTACGGAGAATCAACAGTGACTTCTTGCAGTCTATGCCTAGTCTCAAAGTTTTAAACCTCTCACATTACATGGGATTATGGGTCTTACCTTTGGGAATTTCAAAGTTGGTTTCACTTGAACACCTTGATCTTTCCACCTCACTTATATCTGAGATTCCTGAAGAGTTAAAGGCGTTGGTAAATCTTAAATGTCTGAATTTGGAAAACACTGGTCGTTTATTAAAAATTCCTCTGCAACTACTATCTAATTTTTCAAGGTTACATGTGCTGAGAATGTTCGGTAATGGTTATTTTTCGTGTGGCGATTATCCAATAGAAAGTGTTTTGTTCGGTGGGGGAGAACTCTTAGTAGAGGAGTTGCTTGGTCTGAAACATCTAGAGGTATTGAGCTTGACCTTGGGAAGTTCTCGTGCCCTCCAAAGTTTTTTGAACTCACATAAGTTACGAAGTTGTACTCAAGCTATGCTCCTCCAAGACTTCGAAGGTTCGACTTCGGTTGATGTTCCTGGCTTGGCAAATCTGAAGCAGCTAAAAAGATTACGGATTTCAGACTATTATGAATTGGTGGAATTGAAGATTGATTATGCAGGGGAAGTACAACGTTATGGTTTCCACAGCCTTCAGAGTTTTGAAGTAAACTTTTGCTCTCAAGTGAAGGACTTGACACTCCTTGTTTTGATTCCAAACCTCAAGTTCATTGAAGTAACAGATTGCGCGGCTATGGAAGAAATCACAAGTGTGGGAGAATTTGCTGGAAATCCAAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR type disease resistance protein | NBS-LRR type disease resistance protein [Citrus reticulata]. | VPTCPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGNGYFSCGDYPIESVLFGGGELLVEELLGLKHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCAAMEEITSVGEFAGNP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52058 | 1-262 | L domain-like,LRR | VPTCPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGNGYFSCGDYPIESVLFGGGELLVEELLGLKHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCAAMEEIT |
| HMMPanther: PTHR23155 | 4-261 | FAMILY NOT NAMED,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | CPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGNGYFSCGDYPIESVLFGGGELLVEELLGLKHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCAAMEEI |
| HMMPanther: PTHR23155:SF108 | 4-261 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | CPHLLTLFLNNNELLRRINSDFLQSMPSLKVLNLSHYMGLWVLPLGISKLVSLEHLDLSTSLISEIPEELKALVNLKCLNLENTGRLLKIPLQLLSNFSRLHVLRMFGNGYFSCGDYPIESVLFGGGELLVEELLGLKHLEVLSLTLGSSRALQSFLNSHKLRSCTQAMLLQDFEGSTSVDVPGLANLKQLKRLRISDYYELVELKIDYAGEVQRYGFHSLQSFEVNFCSQVKDLTLLVLIPNLKFIEVTDCAAMEEI |
| Seg: seg | 7-18 | seg | LLTLFLNNNELL |
| Seg: seg | 125-148 | seg | VLFGGGELLVEELLGLKHLEVLSL |
| Gene3D: G3DSA:3.80.10.10 | 178-201 | no description | EGSTSVDVPGLANLKQLKRLRISD |
List of Contributions
There has not been any contribution yet.
