PRGDB00047243 (F18B3.240)
| F18B3.240 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 4835223 (AL049862) |
| Gene Class | CNL |
| Domain Type | LRR, NBS, LRR, LRR, Others |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGGTGGACGCTGTTGTAACAGTGTTTTTAGAGAAAACCTTGAACATCCTCGAAGAAAAAGGCCGAACCGTATCGGACTACCGAAAACAGTTGGAAGATTTGCAAAGCGAATTGAAATATATGCAGTCTTTTCTCAAGGATGCAGAGAGGCAGAAGAGAACTAATGAAACGTTGCGTACTCTTGTTGCGGATTTACGAGAACTGGTTTACGAAGCTGAGGATATACTTGTGGATTGTCAGCTCGCGGATGGTGATGATGGGAACGAGCAAAGGTCATCAAATGCGTGGCTTTCGCGGCTTCATCCTGCCCGGGTTCCGTTGCAGTACAAGAAAAGCAAACGTTTGCAAGAGATCAATGAGAGGATAACGAAAATAAAGAGTCAAGTAGAGCCTTATTTCGAATTCATAACGCCGAGTAATGTTGGAAGAGATAATGGAACTGATCGGTGGAGCTCTCCGGTGTATGATCATACTCAGGTGGTTGGTTTGGAAGGAGATAAAAGAAAAATCAAGGAGTGGCTCTTTCGATCAAACGACAGCCAGCTTTTGATAATGGCCTTTGTTGGGATGGGAGGGCTAGGTAAAACTACAATCGCTCAAGAAGTGTTCAATGACAAAGAGATCGAACATCGTTTCGAAAGAAGGATATGGGTGTCTGTGTCCCAGACTTTTACTGAAGAACAGATCATGAGAAGCATATTGAGGAACTTGGGGGACGCGAGTGTTGGAGATGATATTGGAACATTGCTGAGAAAAATCCAGCAGTATCTTTTGGGGAAAAGGTACTTGATAGTTATGGACGATGTATGGGACAAGAATTTGAGCTGGTGGGACAAGATCTACCAAGGACTGCCTAGAGGACAAGGAGGTAGCGTTATCGTGACCACAAGGTCGGAATCTGTAGCGAAAAGGGTGCAAGCGAGAGACGACAAGACTCACCGTCCAGAGCTCCTTAGTCCTGATAACAGTTGGCTGCTGTTTTGTAATGTGGCATTTGCAGCAAATGACGGTACTTGTGAGCGTCCCGAGCTAGAGGATGTTGGCAAGGAGATTGTAACGAAATGCAAAGGTTTGCCTTTGACAATCAAAGCGGTTGGTGGGTTACTTCTGTGCAAAGACCATGTCTATCATGAATGGAGACGAATTGCAGAGCATTTTCAGGATGAGCTAAGAGGAAACACTTCTGAAACTGACAATGTTATGTCTTCTCTGCAGTTGAGCTACGATGAACTCCCTTCCCACCTTAAGTCGTGCATTCTCACGCTTTCGCTCTATCCAGAAGACTGTGTTATACCAAAACAACAACTAGTACATGGATGGATCGGAGAAGGTTTTGTCATGTGGAGAAACGGAAGATCTGCAACTGAATCTGGAGAAGACTGCTTTTCCGGGCTCACAAACAGGTGTCTAATAGAAGTTGTAGACAAAACCTATAGCGGAACCATCATCACTTGCAAGATTCATGACATGGTTCGTGATTTGGTGATCGATATAGCCAAGAAGGATTCGTTCTCTAACCCGGAAGGCCTCAACTGTCGTCACCTTGGGATTAGTGGAAACTTTGATGAGAAGCAGATCAAAGTTAACCATAAGCTGAGAGGCGTAGTGTCAACAACTAAGACAGGTGAAGTGAACAAGCTCAACTCAGACTTAGCTAAGAAATTCACAGACTGCAAATATCTTCGGGTTCTCGATATCTCGAAATCCATATTTGATGCTCCTCTGTCTGAGATTTTGGATGAGATTGCAAGCCTTCAACACTTAGCATGTCTTAGTTTGAGCAACACACATCCGTTGATCCAGTTTCCTCGTTCCATGGAAGATCTCCACAACCTTCAGATTCTAGACGCAAGCTACTGTCAGAATCTGAAACAACTTCAACCTTGCATCGTCTTGTTCAAGAAACTCCTTGTACTTGACATGACGAACTGTGGATCCCTTGAATGCTTCCCCAAGGGTATCGGAAGTCTCGTGAAGCTCGAAGTTCTGTTGGGATTTAAGCCAGCCAGGTCCAACAATGGGTGCAAGCTCAGTGAAGTGAAAAATCTCACAAACCTTCGGAAACTTGGTCTTTCTCTGACTCGTGGCGATCAGATAGAAGAGGAGGAGCTTGATTCTTTGATAAACCTAAGCAAGCTGATGTCCATTTCGATCAACTGCTATGATAGCTACGGCGATGATCTCATAACCAAAATAGACGCCCTTACTCCTCCACACCAGCTCCATGAGCTTTCTCTACAATTCTATCCTGGAAAGTCGAGTCCATCGTGGTTGAGTCCTCACAAGCTTCCGATGTTGAGGTACATGTCAATATGTTCAGGTAATTTGGTGAAAATGCAGGAACCATTCTGGGGAAACGAGAATACTCACTGGAGAATTGAAGGTTTAATGTTAAGTTCATTGTCGGACCTAGACATGGACTGGGAAGTGCTGCAACAGTCAATGCCGTACCTGAGGACCGTGACCGCAAACTGGTGTCCAGAGCTAGAGTCTTTCGCGATTGAAGATGTTGGCTTTAGAGGCGGAGTGTGGATGAAAACACCATTGCACAGAACCTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| putative disease resistance protein | putative disease resistance protein [Arabidopsis thaliana]. | MVDAVVTVFLEKTLNILEEKGRTVSDYRKQLEDLQSELKYMQSFLKDAERQKRTNETLRTLVADLRELVYEAEDILVDCQLADGDDGNEQRSSNAWLSRLHPARVPLQYKKSKRLQEINERITKIKSQVEPYFEFITPSNVGRDNGTDRWSSPVYDHTQVVGLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGEDCFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSFSNPEGLNCRHLGISGNFDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFTDCKYLRVLDISKSIFDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISINCYDSYGDDLITKIDALTPPHQLHELSLQFYPGKSSPSWLSPHKLPMLRYMSICSGNLVKMQEPFWGNENTHWRIEGLMLSSLSDLDMDWEVLQQSMPYLRTVTANWCPELESFAIEDVGFRGGVWMKTPLHRT |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF244 | 2-847 | PTHR23155:SF244,DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) | VDAVVTVFLEKTLNILEEKGRTVSDYRKQLEDLQSELKYMQSFLKDAERQKRTNETLRTLVADLRELVYEAEDILVDCQLADGDDGNEQRSSNAWLSRLHPARVPLQYKKSKRLQEINERITKIKSQVEPYFEFITPSNVGRDNGTDRWSSPVYDHTQVVGLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGEDCFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSFSNPEGLNCRHLGISGNFDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFTDCKYLRVLDISKSIFDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISINCYDSYGDDLITKIDALTPPHQLHELSLQFYPGKSSPSWLSPHKLPMLRYMSICSGNLVKMQEPFWGNENTHWRIEGLMLSSLSDLDMDWEVLQQSMPYLRTVTANWCPELESFAIEDVGFRGGVWMKT |
| HMMPanther: PTHR23155 | 2-847 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | VDAVVTVFLEKTLNILEEKGRTVSDYRKQLEDLQSELKYMQSFLKDAERQKRTNETLRTLVADLRELVYEAEDILVDCQLADGDDGNEQRSSNAWLSRLHPARVPLQYKKSKRLQEINERITKIKSQVEPYFEFITPSNVGRDNGTDRWSSPVYDHTQVVGLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGEDCFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSFSNPEGLNCRHLGISGNFDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFTDCKYLRVLDISKSIFDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISINCYDSYGDDLITKIDALTPPHQLHELSLQFYPGKSSPSWLSPHKLPMLRYMSICSGNLVKMQEPFWGNENTHWRIEGLMLSSLSDLDMDWEVLQQSMPYLRTVTANWCPELESFAIEDVGFRGGVWMKT |
| superfamily: SSF52540 | 149-394 | SSF52540 | RWSSPVYDHTQVVGLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNT |
| Gene3D: G3DSA:3.40.50.300 | 161-305 | G3DSA:3.40.50.300 | VGLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQGGSVIVTTRSESVAKRV |
| HMMPfam: PF00931 IPR002182
|
165-450 | NB-ARC,NBS NB-ARC
|
GDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRN |
| FPrintScan: PR00364 IPR000767
|
184-199 | DISEASERSIST Disease resistance protein
|
IMAFVGMGGLGKTTIA |
| FPrintScan: PR00364 IPR000767
|
256-270 | DISEASERSIST Disease resistance protein
|
YLLGKRYLIVMDDVW |
| FPrintScan: PR00364 IPR000767
|
355-369 | DISEASERSIST Disease resistance protein
|
CKGLPLTIKAVGGLL |
| superfamily: SSF52058 | 487-838 | SSF52058,LRR | IHDMVRDLVIDIAKKDSFSNPEGLNCRHLGISGNFDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFTDCKYLRVLDISKSIFDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISINCYDSYGDDLITKIDALTPPHQLHELSLQFYPGKSSPSWLSPHKLPMLRYMSICSGNLVKMQEPFWGNENTHWRIEGLMLSSLSDLDMDWEVLQQSMPYLRTVTANWCPELESFAIEDVG |
| Gene3D: G3DSA:3.80.10.10 | 525-732 | G3DSA:3.80.10.10 | QIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFTDCKYLRVLDISKSIFDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISINCYDSYGDDLITKI |
| FPrintScan: PR00364 IPR000767
|
607-623 | DISEASERSIST Disease resistance protein
|
EDLHNLQILDASYCQNL |
List of Contributions
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