PRGDB00047490 (OSJNAb0072F04.20)
| OSJNAb0072F04.20 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 21104880 (AC122147) |
| Gene Class | NL |
| Domain Type | LRR, NBS, LRR, LRR, Others |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
ATGGATATCGTGGTGAGCGTCTCACATGGGGCACTGGGACCACTGCTGGGCAAGCTCAATACCTTGCTCGTAGACGAGTGCGCACGCCTGAAAGGTGTCCACCGTGAGATACGCTCTCTTAGATCGGAGTTGAGCAACATGCATGCGGCGCTCCACAAGTACACATCACTCGAGGATCCTGACATCCAGGTGAAGACCTGGACAAGCGAGTTGAGGGAGCTTGCCTATGACATCGAGGACTGCATAGACAAGTTCATGCACCAACTTGGTGCCAACGACGACCAGCACCACACTAGTAATGGCGTCAAGGACTTCTTCGGGAAGAGTGCAAAACGTCTCAAAACTCTTGGCTCAAGGCATAATATTGCTGCCGAGATTGAAGAACTGAAGATGCGAGTTATCTCGGTGAGAGATCAAAAGAACAACTACAAGCTTGATGATATTTTTTGTAGTAGCTCTAGCAACACTAATGCTTTTGTTGATCCACGGTTGGCTGCTCTCTTCGCGGAAGAGAACCATCTTGTCGGTATAGATAGTCCAAGGGATGAACTTGTCAATTGGTTGGATGCAGACAGCAGGTCAATTGTGGGGTTTGGAGGTCTTGGAAAGACAACTCTAGCAAATGAGGTATATCGTAGGGTTAAAATCCATTTTGATTGCCCTGCTTTTACGTCGGTATCACAAAAGCCTGATATGAAGAAAATCTTCAAGGATATTATATACCATATGCCTACAAAAGATGCATTCCTCAAAGATATTGACACATGGAATGAAAAGAAATTTATTGAAAAGCTAAGAGAACTACTTGTGGATAAGAGGTATCTTGTTATAATTGATGATGTCTGGTCTATTTCGGCATGGAAAGCTATCAGTGTTGTTTTCCCGGAGAATGGTTCTAGTATAATTATAGTTACTACACGCATTTCCGATGTTGGACGGTCATGCTGCTTAAATGGAATTGACCGCAATTTTGAGATGGAACCTCTAAGTGAAATTCACTCTAGAAGACTATTTTGCCAGAGAATTTTCAGCACAGATGAGGATGGCTGCCCAGATATTTTACAAGAAGTTTCAACAGATATCTTGAAGAAATGTGGGGGTATTCCATTAGCAATTATTAGTATATCTGGTTTGTTATCAAACAGACCAATTATCAAGGAAGAGTGGGAGAAAGTGAAAGAATCGATTGGTTTTGTATTGGACAAGAACCAAAATCTAGAAGGAATGAAAAGCATACTCTCCCTTAGCTACAATGACCTTCCAAACTATTTTAAGGCATGTTTGATATATTTGTGCATATTTCCAGAGGATTATATTATTGAAACAAACATGCTATTACGGCGATGGATAGCTGAAGGCTTTGTCTCTGAGGATTGTGGAATGAACTTGGAAGATGTTGCAGAGAGCTACTTTTGTGAGCTGGTCAACAGAAGCCTGGTCCAACCTGTGGACATTCGCTTTGACAGTAAGGCCCGTGCATGCCGCGTCCATGATATAATGCTTGAACTTATCACTTCAAAGGCGACAGAAGAAAACTTTATTACATTGTTACGTGGCCAAACAAGGAAAACAAATTTGCATGGCTACGTTCGTCGATTATCCATCCAGGACACTGATAATGATTTGTCAAGTCTGTTAGTAAACAAAGATTTAAGCCATGTTCGATCTCTAACCTGCTTTGGTGGGAACATGAATCTTTTGCCACAGCTTGCCCGATTTGAGGCTATACGAGTGTTGGAGTTTGAAGGCTCTATGAATTTGGAGCAGTATGATTTGGAAAATACAGACAAGCTATTCCAACTCAAGTACTTAAGCCTTCGTGGTTCAGACATATCACACATACCAAGACAAATTGCAAAGCTCCAAAATTTGCTGACATTGGACATAAGTGAAACATTCGTAGAAGAGCTGCCCACCGAATTATGCCTGTTGAAAAAGTTACTACATCTATTCGGAAATTCCTTGAAGCTACCAGATGGGATTGGGAATATGAGGAATCTACAGGTGCTGACAGGCATTAATATAAGTAATAGCTCAGCAAGTACAGTGCCCGAGCTTGGTGAACTAACCAGTTTGAGGGACCTCAAAATAAGTTTGTCTGATAAACTCAGCAAGTGCAAGACAAAAGAAGAGATGTTACTCGCCTCACTTTGTAAACTAAGCAGCTACAAACTCCAATCGTTGCATATTATATATAACAGTTCCGATGATCTCTTAGAACGTTGGTTCCCTATCCCTTGTTTCCTCCGATTGTTTCGCATGAGCACTAATCACTTTCTCCCACAACTTCCAAAGTGGATTAAACCGAGTCTCACCAAAATGGCATACCTGAACATCAATTTACGTGAGATAAAGGAGGAAGATATGGAAACACTTGGAGACCTGCCAGCCTTACTCTGTCTAGAAATATGGCTAGAACCTAACCCAAAAAAACAGCTTACAGTCCAAAGCACAGGATTCCCATGTCTCAAGGAGTTTCTCCTTGTTTGCGGCGATCACGATGGTGGAGCGTACCTAACATTTGGGAAAGGGGCTATGCCAAAGCTGGAGAAGCTTGAGATTCCATTTCACGTATTAATGGCAAAATCCCATGGGAAAGGAAGCCCCAAAGGAGGGAGGGCCACTGAAGATTACGGTCATGGGCCATCCGCATCAAGACGTCTTCAATATGGATTTAACAAAGTGCTAGCAAGTTCAACAGCCTCCAACGCCCTTCGGGGGAAAGAAGCCCCTAAGGGGGGAGGGCTGCTAAACAATGTGGCCAAGACAACCAGGGGACTGTACGTTCTGATACCGAGTCTGCGGTGGCTGCAATCAAGAGAGAAGCAAGTGCAAATCCCAACCATCCTAGACTTGCCATCTTCGGAGCAGATGCAGAAGAGGTCCAAGAGGATAATAGCGAAGAGAGTGATTATAACTGGGGTTCAGAGGATGACGATGCTACTGACACCTGATATTGTTGCCAGCCATGATCTTTCTGGCAACCCATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Putative disease resistance protein | Putative disease resistance protein [Oryza sativa (japonica cultivar-group)]. | MDIVVSVSHGALGPLLGKLNTLLVDECARLKGVHREIRSLRSELSNMHAALHKYTSLEDPDIQVKTWTSELRELAYDIEDCIDKFMHQLGANDDQHHTSNGVKDFFGKSAKRLKTLGSRHNIAAEIEELKMRVISVRDQKNNYKLDDIFCSSSSNTNAFVDPRLAALFAEENHLVGIDSPRDELVNWLDADSRSIVGFGGLGKTTLANEVYRRVKIHFDCPAFTSVSQKPDMKKIFKDIIYHMPTKDAFLKDIDTWNEKKFIEKLRELLVDKRYLVIIDDVWSISAWKAISVVFPENGSSIIIVTTRISDVGRSCCLNGIDRNFEMEPLSEIHSRRLFCQRIFSTDEDGCPDILQEVSTDILKKCGGIPLAIISISGLLSNRPIIKEEWEKVKESIGFVLDKNQNLEGMKSILSLSYNDLPNYFKACLIYLCIFPEDYIIETNMLLRRWIAEGFVSEDCGMNLEDVAESYFCELVNRSLVQPVDIRFDSKARACRVHDIMLELITSKATEENFITLLRGQTRKTNLHGYVRRLSIQDTDNDLSSLLVNKDLSHVRSLTCFGGNMNLLPQLARFEAIRVLEFEGSMNLEQYDLENTDKLFQLKYLSLRGSDISHIPRQIAKLQNLLTLDISETFVEELPTELCLLKKLLHLFGNSLKLPDGIGNMRNLQVLTGINISNSSASTVPELGELTSLRDLKISLSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIYNSSDDLLERWFPIPCFLRLFRMSTNHFLPQLPKWIKPSLTKMAYLNINLREIKEEDMETLGDLPALLCLEIWLEPNPKKQLTVQSTGFPCLKEFLLVCGDHDGGAYLTFGKGAMPKLEKLEIPFHVLMAKSHGKGSPKGGRATEDYGHGPSASRRLQYGFNKVLASSTASNALRGKEAPKGGGLLNNVAKTTRGLYVLIPSLRWLQSREKQVQIPTILDLPSSEQMQKRSKRIIAKRVIITGVQRMTMLLTPDIVASHDLSGNP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF189 | 8-854 | PTHR23155:SF189,OS10G0131000 PROTEIN | SHGALGPLLGKLNTLLVDECARLKGVHREIRSLRSELSNMHAALHKYTSLEDPDIQVKTWTSELRELAYDIEDCIDKFMHQLGANDDQHHTSNGVKDFFGKSAKRLKTLGSRHNIAAEIEELKMRVISVRDQKNNYKLDDIFCSSSSNTNAFVDPRLAALFAEENHLVGIDSPRDELVNWLDADSRSIVGFGGLGKTTLANEVYRRVKIHFDCPAFTSVSQKPDMKKIFKDIIYHMPTKDAFLKDIDTWNEKKFIEKLRELLVDKRYLVIIDDVWSISAWKAISVVFPENGSSIIIVTTRISDVGRSCCLNGIDRNFEMEPLSEIHSRRLFCQRIFSTDEDGCPDILQEVSTDILKKCGGIPLAIISISGLLSNRPIIKEEWEKVKESIGFVLDKNQNLEGMKSILSLSYNDLPNYFKACLIYLCIFPEDYIIETNMLLRRWIAEGFVSEDCGMNLEDVAESYFCELVNRSLVQPVDIRFDSKARACRVHDIMLELITSKATEENFITLLRGQTRKTNLHGYVRRLSIQDTDNDLSSLLVNKDLSHVRSLTCFGGNMNLLPQLARFEAIRVLEFEGSMNLEQYDLENTDKLFQLKYLSLRGSDISHIPRQIAKLQNLLTLDISETFVEELPTELCLLKKLLHLFGNSLKLPDGIGNMRNLQVLTGINISNSSASTVPELGELTSLRDLKISLSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIYNSSDDLLERWFPIPCFLRLFRMSTNHFLPQLPKWIKPSLTKMAYLNINLREIKEEDMETLGDLPALLCLEIWLEPNPKKQLTVQSTGFPCLKEFLLVCGDHDGGAYLTFGKGAMPKLEKLEI |
| HMMPanther: PTHR23155 | 8-854 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | SHGALGPLLGKLNTLLVDECARLKGVHREIRSLRSELSNMHAALHKYTSLEDPDIQVKTWTSELRELAYDIEDCIDKFMHQLGANDDQHHTSNGVKDFFGKSAKRLKTLGSRHNIAAEIEELKMRVISVRDQKNNYKLDDIFCSSSSNTNAFVDPRLAALFAEENHLVGIDSPRDELVNWLDADSRSIVGFGGLGKTTLANEVYRRVKIHFDCPAFTSVSQKPDMKKIFKDIIYHMPTKDAFLKDIDTWNEKKFIEKLRELLVDKRYLVIIDDVWSISAWKAISVVFPENGSSIIIVTTRISDVGRSCCLNGIDRNFEMEPLSEIHSRRLFCQRIFSTDEDGCPDILQEVSTDILKKCGGIPLAIISISGLLSNRPIIKEEWEKVKESIGFVLDKNQNLEGMKSILSLSYNDLPNYFKACLIYLCIFPEDYIIETNMLLRRWIAEGFVSEDCGMNLEDVAESYFCELVNRSLVQPVDIRFDSKARACRVHDIMLELITSKATEENFITLLRGQTRKTNLHGYVRRLSIQDTDNDLSSLLVNKDLSHVRSLTCFGGNMNLLPQLARFEAIRVLEFEGSMNLEQYDLENTDKLFQLKYLSLRGSDISHIPRQIAKLQNLLTLDISETFVEELPTELCLLKKLLHLFGNSLKLPDGIGNMRNLQVLTGINISNSSASTVPELGELTSLRDLKISLSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIYNSSDDLLERWFPIPCFLRLFRMSTNHFLPQLPKWIKPSLTKMAYLNINLREIKEEDMETLGDLPALLCLEIWLEPNPKKQLTVQSTGFPCLKEFLLVCGDHDGGAYLTFGKGAMPKLEKLEI |
| superfamily: SSF52540 | 157-396 | SSF52540 | NAFVDPRLAALFAEENHLVGIDSPRDELVNWLDADSRSIVGFGGLGKTTLANEVYRRVKIHFDCPAFTSVSQKPDMKKIFKDIIYHMPTKDAFLKDIDTWNEKKFIEKLRELLVDKRYLVIIDDVWSISAWKAISVVFPENGSSIIIVTTRISDVGRSCCLNGIDRNFEMEPLSEIHSRRLFCQRIFSTDEDGCPDILQEVSTDILKKCGGIPLAIISISGLLSNRPIIKEEWEKVKESI |
| Gene3D: G3DSA:3.40.50.300 | 178-295 | G3DSA:3.40.50.300 | DSPRDELVNWLDADSRSIVGFGGLGKTTLANEVYRRVKIHFDCPAFTSVSQKPDMKKIFKDIIYHMPTKDAFLKDIDTWNEKKFIEKLRELLVDKRYLVIIDDVWSISAWKAISVVFP |
| FPrintScan: PR00364 IPR000767
|
192-207 | DISEASERSIST Disease resistance protein
|
SRSIVGFGGLGKTTLA |
| HMMPfam: PF00931 IPR002182
|
194-458 | NB-ARC,NBS NB-ARC
|
SIVGFGGLGKTTLANEVYRRVKIHFDCPAFTSVSQKPDMKKIFKDIIYHMPTKDAFLKDIDTWNEKKFIEKLRELLVDKRYLVIIDDVWSISAWKAISVVFPENGSSIIIVTTRISDVGRSCCLNGIDRNFEMEPLSEIHSRRLFCQRIFSTDEDGCPDILQEVSTDILKKCGGIPLAIISISGLLSNRPIIKEEWEKVKESIGFVLDKNQNLEGMKSILSLSYNDLPNYFKACLIYLCIFPEDYIIETNMLLRRWIAEGFVSED |
| FPrintScan: PR00364 IPR000767
|
268-282 | DISEASERSIST Disease resistance protein
|
LLVDKRYLVIIDDVW |
| FPrintScan: PR00364 IPR000767
|
365-379 | DISEASERSIST Disease resistance protein
|
CGGIPLAIISISGLL |
| superfamily: SSF52058 | 495-856 | SSF52058,LRR | RVHDIMLELITSKATEENFITLLRGQTRKTNLHGYVRRLSIQDTDNDLSSLLVNKDLSHVRSLTCFGGNMNLLPQLARFEAIRVLEFEGSMNLEQYDLENTDKLFQLKYLSLRGSDISHIPRQIAKLQNLLTLDISETFVEELPTELCLLKKLLHLFGNSLKLPDGIGNMRNLQVLTGINISNSSASTVPELGELTSLRDLKISLSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIYNSSDDLLERWFPIPCFLRLFRMSTNHFLPQLPKWIKPSLTKMAYLNINLREIKEEDMETLGDLPALLCLEIWLEPNPKKQLTVQSTGFPCLKEFLLVCGDHDGGAYLTFGKGAMPKLEKLEIPF |
| Gene3D: G3DSA:3.80.10.10 | 538-700 | G3DSA:3.80.10.10 | TDNDLSSLLVNKDLSHVRSLTCFGGNMNLLPQLARFEAIRVLEFEGSMNLEQYDLENTDKLFQLKYLSLRGSDISHIPRQIAKLQNLLTLDISETFVEELPTELCLLKKLLHLFGNSLKLPDGIGNMRNLQVLTGINISNSSASTVPELGELTSLRDLKISLS |
| FPrintScan: PR00364 IPR000767
|
619-635 | DISEASERSIST Disease resistance protein
|
AKLQNLLTLDISETFVE |
List of Contributions
There has not been any contribution yet.
