PRGDB00047491 (OSJNAb0022I16.17)
| OSJNAb0022I16.17 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 21104879 (AC122146) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
ATGACAGCATCAGTAGTTTCCTCAGTTTTGCAGAGGCTTGGTGACCTTGTCATCCAAGAAGCTACCTTTTTAAGTGATGTTCCTCGACAAGTATCATCCATGAAAGCAGAACTGAGCCAGATGCAATGCTTCTTAAATGTTGTGGATGCCAAATGTTTGGAAGGAAACAGCATGATGAAAAATCTGGCCAGTAATATTCAAGACGTGGCATACCGGGTGGAAGAGGTTATTGACAATGCTCATTTCATTTTTAGGAGGAGAAAGACTTCTGTATCAAAATATACTCACATCTTTGGTGATTCCATTGACCTCCGTGAGGTTGGCAAAAACATACAAGTTATAAGAAAGGAAATTAGTGAGATTTTTGAGCGGTACAACAGATACAACGCAGTTAATTCTAGCACTTCAACGGAAGCACAGCCCATTTTTAGGGAGGATGAGGATTTCTATGCACAAAGGCTTGTGCCGCCGGGTTTGGATCAAGGAATGGATATAGTTGGATTCGATCATGAAATTGCACAAATTAAGAGTTACTTGCTTGACCAAAATAACATGAATCTAACTGTTATATCGATTGTTGGTCAGGCAGGGGCTGGGAAGTCCACACTTGCAAAACTAGCTTATAGTTCAGTCATAACTGAAGGTTATTTTCACAAATATGGTTGGGTATCCATTTCTCCAAAATATTCTGCCCTTGAAGTATTAAGAGATCTCGTGCGACAGATAAGGGGCACTGGGAAGATAAGCGAGCGAAAGAGCATGCATTTAAATTTCTATGGTGAGACAGAGGTTTCAAAACTTATTTTTGATTTTCTGAAGGAAGAGCGCTACCTTATTGTTTTGGATGACATCTGGACAACAGATACCTGGGACAAGATCAAATCAGTATTTCCTGACAAAGGAAATGGAAGTAGAATAATTCTGACTACCCGTGATATGGAAGTTGGACAACATCCTAAAACTAAAGTGCAAATTCATACCCCTGACCTATTAGACGAAGACAAGAGCTGGGAACTTTTCCAGAAGAAGGCATTTCCACATGATGTGCAATTCACAGAACTTGAGGTGGTGGGGAAAAAACTCTCCAAGAAATGCAATGGCTTGCCACTTGCTCTAGTGGTTTTAGGTTGCTTCCTTTCACGAAACCACAATATTCATACATGGGAGAAAATGGTTGCTAGTGTAGACTGGGAAATCATGAAAAAGGAGGGCGATGTTGGACGTATATTAGCTCTAAGTTATCACAATATGTCAAATAACCTTAAAGCTTGCTTCCTTTATACTGCATCCTTTCCCGAGGACTACCCTATCACAGTTCATGTTCTTAAAAAGATGTGGATTGCTGAGGGATTTGTCCCAAATATAAGAGGATATACACAAGAAGAAGTTGCCTACAGATATGTAGAAGAGCTGGCACAGAGATGTATGATCCAAATTGAAGAAAGAAGTAAAAACATTGGGTGGATAAAGAAAATAAAAGTTCATGATGTGTTGCGTGAGTGGGGAATTGGACAAGCCAGGAAGGAAGGTTTCTTGAAAGTTTGCTCAAGCGGCACAGATGTGGAGACTTATTATGCAGATGAACAGAGGTGTTACCGTGTAGCATTTCATGGTTACTTTGATAATGAAGTGGGAAAATCAGTTCTGAATCTCCGTTCTGTGCTGGCCTTCAACCCTGATGGCAAACGTCTGTTTTCTTTCAATGGGTTGCATTTGTTGAGGGTGCTTCATTTTTGCAGTTCCTTAAAGACATGTACCTTGCCTGAAGAAATAAACAAATTGGTACATCTGAGATACCTGGGTTTGGAAGGTAGTACTGTTTTCATGTTCCCTTCTTATATGAAAGGTCTTAGAAACTTGCAAATTCTTGAAGCAAGTACAGCTACTGTCAAGGCACTTCCAAGTTCCCTCTGGAGCATCGCAGCACTAAAGCATGTTCATGTCTACCAAGTACTGCATTGGAAAGCCCAGGAGATTAGAACGAAACGAAGCTTGCAGACTCTTTATGTATTTTCCATAATGCAGTGTGATGCTCTGACGTGGAAAAGAACAATCAGGTCTCTGCAAAAAATGAGCCAACATGTTTCCTGGTGCTTAGGGATAGCCTCTACTAAACGCGTGAAGGAAAAAGAGACCCAAGAACATGAAGAATACAATTTAGATATAAGGGTAGATGCCTTAGAATCCAAAGTTGATGGTTTAGAATTGTCTGGATGTTTTAAAGAGCGTCACGTTCTGAATGATGTGCTTCCACATCATAATCTATTCCCAAACTTTCTATTGCAGCTCAAGATATCTTGTCCCAATATACTAAATGATGATCCAATGCCAATTCTGGAGAGACTTCCACGTCTTGAAGTGCTTGAAATTGTTAACTCATCATACACAGGAAAGAGAATAACATGTTCTTCCGAGGGATTCCTTGCATTACGCAGTTTGGTACTTATGGATATTGGTTTGGAGGAGTGGAATTTGCAGCAGGGATCCATGGCGTTTCTCGCTGTTTTGACTCTCAAGTGTACCATGCTGAGGAGCATCTCAAATGTACTTCACCAGCTGGATGATTTGGTAGAGCTTCGCTTGATTTGCATGCCTCAGCTCTCTGTTGATGATCATGAGCCAGCTAGGGGGAGGGGATGCCGTGTCATGATTTCAGTTGACGAGGAACAAACTTCTGATACTTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Putative disease resistance protein | Putative disease resistance protein [Oryza sativa (japonica cultivar-group)]. | MTASVVSSVLQRLGDLVIQEATFLSDVPRQVSSMKAELSQMQCFLNVVDAKCLEGNSMMKNLASNIQDVAYRVEEVIDNAHFIFRRRKTSVSKYTHIFGDSIDLREVGKNIQVIRKEISEIFERYNRYNAVNSSTSTEAQPIFREDEDFYAQRLVPPGLDQGMDIVGFDHEIAQIKSYLLDQNNMNLTVISIVGQAGAGKSTLAKLAYSSVITEGYFHKYGWVSISPKYSALEVLRDLVRQIRGTGKISERKSMHLNFYGETEVSKLIFDFLKEERYLIVLDDIWTTDTWDKIKSVFPDKGNGSRIILTTRDMEVGQHPKTKVQIHTPDLLDEDKSWELFQKKAFPHDVQFTELEVVGKKLSKKCNGLPLALVVLGCFLSRNHNIHTWEKMVASVDWEIMKKEGDVGRILALSYHNMSNNLKACFLYTASFPEDYPITVHVLKKMWIAEGFVPNIRGYTQEEVAYRYVEELAQRCMIQIEERSKNIGWIKKIKVHDVLREWGIGQARKEGFLKVCSSGTDVETYYADEQRCYRVAFHGYFDNEVGKSVLNLRSVLAFNPDGKRLFSFNGLHLLRVLHFCSSLKTCTLPEEINKLVHLRYLGLEGSTVFMFPSYMKGLRNLQILEASTATVKALPSSLWSIAALKHVHVYQVLHWKAQEIRTKRSLQTLYVFSIMQCDALTWKRTIRSLQKMSQHVSWCLGIASTKRVKEKETQEHEEYNLDIRVDALESKVDGLELSGCFKERHVLNDVLPHHNLFPNFLLQLKISCPNILNDDPMPILERLPRLEVLEIVNSSYTGKRITCSSEGFLALRSLVLMDIGLEEWNLQQGSMAFLAVLTLKCTMLRSISNVLHQLDDLVELRLICMPQLSVDDHEPARGRGCRVMISVDEEQTSDT |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 142-402 | P-loop containing nucleoside triphosphate hydrolases | IFREDEDFYAQRLVPPGLDQGMDIVGFDHEIAQIKSYLLDQNNMNLTVISIVGQAGAGKSTLAKLAYSSVITEGYFHKYGWVSISPKYSALEVLRDLVRQIRGTGKISERKSMHLNFYGETEVSKLIFDFLKEERYLIVLDDIWTTDTWDKIKSVFPDKGNGSRIILTTRDMEVGQHPKTKVQIHTPDLLDEDKSWELFQKKAFPHDVQFTELEVVGKKLSKKCNGLPLALVVLGCFLSRNHNIHTWEKMVASVDWEIMKK |
| Gene3D: G3DSA:3.40.50.300 | 167-314 | no description | GFDHEIAQIKSYLLDQNNMNLTVISIVGQAGAGKSTLAKLAYSSVITEGYFHKYGWVSISPKYSALEVLRDLVRQIRGTGKISERKSMHLNFYGETEVSKLIFDFLKEERYLIVLDDIWTTDTWDKIKSVFPDKGNGSRIILTTRDME |
| HMMPfam: PF00931 IPR002182
|
169-454 | NB-ARC,NBS NB-ARC
|
DHEIAQIKSYLLDQNNMNLTVISIVGQAGAGKSTLAKLAYSSVITEGYFHKYGWVSISPKYSALEVLRDLVRQIRGTGKISERKSMHLNFYGETEVSKLIFDFLKEERYLIVLDDIWTTDTWDKIKSVFPDKGNGSRIILTTRDMEVGQHPKTKVQIHTPDLLDEDKSWELFQKKAFPHDVQFTELEVVGKKLSKKCNGLPLALVVLGCFLSRNHNIHTWEKMVASVDWEIMKKEGDVGRILALSYHNMSNNLKACFLYTASFPEDYPITVHVLKKMWIAEGFVPN |
| FPrintScan: PR00364 IPR000767
|
189-204 | DISEASERSIST Disease resistance protein
|
VISIVGQAGAGKSTLA |
| HMMPanther: PTHR11017 | 190-885 | FAMILY NOT NAMED,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | ISIVGQAGAGKSTLAKLAYSSVITEGYFHKYGWVSISPKYSALEVLRDLVRQIRGTGKISERKSMHLNFYGETEVSKLIFDFLKEERYLIVLDDIWTTDTWDKIKSVFPDKGNGSRIILTTRDMEVGQHPKTKVQIHTPDLLDEDKSWELFQKKAFPHDVQFTELEVVGKKLSKKCNGLPLALVVLGCFLSRNHNIHTWEKMVASVDWEIMKKEGDVGRILALSYHNMSNNLKACFLYTASFPEDYPITVHVLKKMWIAEGFVPNIRGYTQEEVAYRYVEELAQRCMIQIEERSKNIGWIKKIKVHDVLREWGIGQARKEGFLKVCSSGTDVETYYADEQRCYRVAFHGYFDNEVGKSVLNLRSVLAFNPDGKRLFSFNGLHLLRVLHFCSSLKTCTLPEEINKLVHLRYLGLEGSTVFMFPSYMKGLRNLQILEASTATVKALPSSLWSIAALKHVHVYQVLHWKAQEIRTKRSLQTLYVFSIMQCDALTWKRTIRSLQKMSQHVSWCLGIASTKRVKEKETQEHEEYNLDIRVDALESKVDGLELSGCFKERHVLNDVLPHHNLFPNFLLQLKISCPNILNDDPMPILERLPRLEVLEIVNSSYTGKRITCSSEGFLALRSLVLMDIGLEEWNLQQGSMAFLAVLTLKCTMLRSISNVLHQLDDLVELRLICMPQLSVDDHEPARGRGCRVMIS |
| FPrintScan: PR00364 IPR000767
|
271-285 | DISEASERSIST Disease resistance protein
|
FLKEERYLIVLDDIW |
| Seg: seg | 282-294 | seg | DDIWTTDTWDKIK |
| FPrintScan: PR00364 IPR000767
|
365-379 | DISEASERSIST Disease resistance protein
|
CNGLPLALVVLGCFL |
| superfamily: SSF52058 | 493-865 | L domain-like,LRR | KVHDVLREWGIGQARKEGFLKVCSSGTDVETYYADEQRCYRVAFHGYFDNEVGKSVLNLRSVLAFNPDGKRLFSFNGLHLLRVLHFCSSLKTCTLPEEINKLVHLRYLGLEGSTVFMFPSYMKGLRNLQILEASTATVKALPSSLWSIAALKHVHVYQVLHWKAQEIRTKRSLQTLYVFSIMQCDALTWKRTIRSLQKMSQHVSWCLGIASTKRVKEKETQEHEEYNLDIRVDALESKVDGLELSGCFKERHVLNDVLPHHNLFPNFLLQLKISCPNILNDDPMPILERLPRLEVLEIVNSSYTGKRITCSSEGFLALRSLVLMDIGLEEWNLQQGSMAFLAVLTLKCTMLRSISNVLHQLDDLVELRLICMP |
| Gene3D: G3DSA:3.80.10.10 | 769-861 | no description | NILNDDPMPILERLPRLEVLEIVNSSYTGKRITCSSEGFLALRSLVLMDIGLEEWNLQQGSMAFLAVLTLKCTMLRSISNVLHQLDDLVELRL |
| FPrintScan: PR00364 IPR000767
|
780-796 | DISEASERSIST Disease resistance protein
|
ERLPRLEVLEIVNSSYT |
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