PRGDB00047543 (nucleotide binding site leucine-rich repeat disease resistance protein)
| nucleotide binding site leucine-rich repeat disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 40644896 (AJ581791) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Pyrus communis |
DNA Sequence
ATGGGTGGCGTAGGTAAAACGACACTTGCTCAACTTGTATTCAACAACAAAGATGATGCCATGAAGGATTTTGAGCTCAAGGTCTGGGTATCTGTGTCCGATGACTTTGATGTGGTGCGAGTGACAAAGGCAATTCTTGAATCAATCACATCCCGACCCGTTCAAGTGGAGGAGTTTAGTAAAATGCAGCATGATTTGAGTGAGCAATTAAGAGGAAAAAAGTTTTTAATTGTTTTAGATGATATCTGGGACAAAGATGGCTCTGATCTATACGATCTCTGGACAAGACTTCAATCCCCTTTTGGCGTCGGAGCAGGAGGAAGCAAGATAATTGTGACAACCCGTGACAGGAATGTTGCAAAGCTTACGGGAGCCGCTGGAGTTCATAATTTGGAGTGTATGGCAGATGATGATTGTATGGAAATATTTGAGCAACACGCGTTCGGGGAAATTAATAACGGAAAACCAGTAAATTATGAGGTAATTCGGACGAAAATTGTTGGAAAATGTTGTGGATTACCATTAGCTGCAAGAACTCTCGGTTGTCTTCCCGACTCCTCCCATA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus communis]. | MGGVGKTTLAQLVFNNKDDAMKDFELKVWVSVSDDFDVVRVTKAILESITSRPVQVEEFSKMQHDLSEQLRGKKFLIVLDDIWDKDGSDLYDLWTRLQSPFGVGAGGSKIIVTTRDRNVAKLTGAAGVHNLECMADDDCMEIFEQHAFGEINNGKPVNYEVIRTKIVGKCCGLPLAARTLGCLPDSSH |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 1-186 | SSF52540 | MGGVGKTTLAQLVFNNKDDAMKDFELKVWVSVSDDFDVVRVTKAILESITSRPVQVEEFSKMQHDLSEQLRGKKFLIVLDDIWDKDGSDLYDLWTRLQSPFGVGAGGSKIIVTTRDRNVAKLTGAAGVHNLECMADDDCMEIFEQHAFGEINNGKPVNYEVIRTKIVGKCCGLPLAARTLGCLPDS |
| HMMPanther: PTHR11017 | 1-181 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | MGGVGKTTLAQLVFNNKDDAMKDFELKVWVSVSDDFDVVRVTKAILESITSRPVQVEEFSKMQHDLSEQLRGKKFLIVLDDIWDKDGSDLYDLWTRLQSPFGVGAGGSKIIVTTRDRNVAKLTGAAGVHNLECMADDDCMEIFEQHAFGEINNGKPVNYEVIRTKIVGKCCGLPLAARTLG |
| HMMPfam: PF00931 IPR002182
|
1-182 | NB-ARC,NBS NB-ARC
|
MGGVGKTTLAQLVFNNKDDAMKDFELKVWVSVSDDFDVVRVTKAILESITSRPVQVEEFSKMQHDLSEQLRGKKFLIVLDDIWDKDGSDLYDLWTRLQSPFGVGAGGSKIIVTTRDRNVAKLTGAAGVHNLECMADDDCMEIFEQHAFGEINNGKPVNYEVIRTKIVGKCCGLPLAARTLGC |
| HMMPanther: PTHR11017:SF20 | 1-181 | PTHR11017:SF20,SUBFAMILY NOT NAMED | MGGVGKTTLAQLVFNNKDDAMKDFELKVWVSVSDDFDVVRVTKAILESITSRPVQVEEFSKMQHDLSEQLRGKKFLIVLDDIWDKDGSDLYDLWTRLQSPFGVGAGGSKIIVTTRDRNVAKLTGAAGVHNLECMADDDCMEIFEQHAFGEINNGKPVNYEVIRTKIVGKCCGLPLAARTLG |
| Gene3D: G3DSA:3.40.50.300 | 3-115 | G3DSA:3.40.50.300 | GVGKTTLAQLVFNNKDDAMKDFELKVWVSVSDDFDVVRVTKAILESITSRPVQVEEFSKMQHDLSEQLRGKKFLIVLDDIWDKDGSDLYDLWTRLQSPFGVGAGGSKIIVTTR |
| FPrintScan: PR00364 IPR000767
|
69-83 | DISEASERSIST Disease resistance protein
|
QLRGKKFLIVLDDIW |
| FPrintScan: PR00364 IPR000767
|
170-184 | DISEASERSIST Disease resistance protein
|
CCGLPLAARTLGCLP |
List of Contributions
There has not been any contribution yet.
