PRGDB00047550 (nucleotide binding site leucine-rich repeat disease resistance protein)
| nucleotide binding site leucine-rich repeat disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 40644871 (AJ581777) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Pyrus communis |
DNA Sequence
ATGGGTGGCGTGGGAAAGACGACAGCTGCCAAAGCCATTTATAACCACATTCATCATAAGTTCCAATTCAAAAGCTTCCTTAACGTTAGTGAATATGATCTGGTTGATTTGCAAGGAAAACTCGTTTCTGACATCTTGAAACAGACCGAGTCTAAGATAACTAGTGTTGATGGAGGTATCAGTCTGATAAAAAATCATCTCCAACGTAGAAGTGTACTTGTCATTATTGACAATGTAGACAAAGTGGAACAACTAAATGCAATGGCTGGAAATCGTGATTGGTTTGGCCCAGGAAGTAGAATTATCATAACGACACGAGATGAACATTTACTAAAGCAAGTGAAAATGAAAGTGGACAGGACATATCCCCTTAAGGAAATGAATGAAGAAGAAGCTCTGAAGCTCTTTAGTTGGCATGCCTTTGGAAATAGTTGGCCTAATGAAGGATATCCTGAACTCTCAAAAGAGGTTGTTTCTTACTGTGGTAGTTTTCCTACGCCGCCCATA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus communis]. | MGGVGKTTAAKAIYNHIHHKFQFKSFLNVSEYDLVDLQGKLVSDILKQTESKITSVDGGISLIKNHLQRRSVLVIIDNVDKVEQLNAMAGNRDWFGPGSRIIITTRDEHLLKQVKMKVDRTYPLKEMNEEEALKLFSWHAFGNSWPNEGYPELSKEVVSYCGSFPTPPI |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR11017 | 1-165 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | MGGVGKTTAAKAIYNHIHHKFQFKSFLNVSEYDLVDLQGKLVSDILKQTESKITSVDGGISLIKNHLQRRSVLVIIDNVDKVEQLNAMAGNRDWFGPGSRIIITTRDEHLLKQVKMKVDRTYPLKEMNEEEALKLFSWHAFGNSWPNEGYPELSKEVVSYCGSFP |
| HMMPanther: PTHR11017:SF20 | 1-165 | PTHR11017:SF20,SUBFAMILY NOT NAMED | MGGVGKTTAAKAIYNHIHHKFQFKSFLNVSEYDLVDLQGKLVSDILKQTESKITSVDGGISLIKNHLQRRSVLVIIDNVDKVEQLNAMAGNRDWFGPGSRIIITTRDEHLLKQVKMKVDRTYPLKEMNEEEALKLFSWHAFGNSWPNEGYPELSKEVVSYCGSFP |
| superfamily: SSF52540 | 1-165 | SSF52540 | MGGVGKTTAAKAIYNHIHHKFQFKSFLNVSEYDLVDLQGKLVSDILKQTESKITSVDGGISLIKNHLQRRSVLVIIDNVDKVEQLNAMAGNRDWFGPGSRIIITTRDEHLLKQVKMKVDRTYPLKEMNEEEALKLFSWHAFGNSWPNEGYPELSKEVVSYCGSFP |
| HMMPfam: PF00931 IPR002182
|
1-165 | NB-ARC,NBS NB-ARC
|
MGGVGKTTAAKAIYNHIHHKFQFKSFLNVSEYDLVDLQGKLVSDILKQTESKITSVDGGISLIKNHLQRRSVLVIIDNVDKVEQLNAMAGNRDWFGPGSRIIITTRDEHLLKQVKMKVDRTYPLKEMNEEEALKLFSWHAFGNSWPNEGYPELSKEVVSYCGSFP |
| Gene3D: G3DSA:3.40.50.300 | 3-125 | G3DSA:3.40.50.300 | GVGKTTAAKAIYNHIHHKFQFKSFLNVSEYDLVDLQGKLVSDILKQTESKITSVDGGISLIKNHLQRRSVLVIIDNVDKVEQLNAMAGNRDWFGPGSRIIITTRDEHLLKQVKMKVDRTYPLK |
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