PRGDB00047583 (pNd1)
| pNd1 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 3176742 (U97217) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
GGTGGGGTAGGGAAGACAACGTTAATGCAGAGCGTTAACAACGAGCTGATCACAAAAGGACATCAGTATGATGTACTGATTTGGGTTCAAATGTCCAGAGAATTCGGCGAGTGTACAATTCAGCAAGCCGTTGGAGCACGGTTGGGTTTATCTTGGGACGAGAAGGAGACCGGCGAAAACAGAGCTTTGAAGATATACAGAGCTTTGAGACAGAAACGTTTCTTGTTGTTGCTAGATGATGTCTGGGAAGGGATAGACTTGGAGAAAACTGGAGTTCCTCGACCTGACAGGGAAAACAAATGCAAGGTGATGTTCACGACACGGTCTATAGCATTATGCAACAATATGGGTGCGGAATACAAGTTGAGAGTGGAGTTTCTGGAGAAGAAACACGCGTGGGAGCTGTTCTGTAGTAAGGTATGGAGAAAAGATCTTTTAGAGTCATCATCAATTCGCCGGCTCGCGGAGATTATAGTGAGTAAATGTGGAGGACTCCCCCTCGCCCTC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| disease resistance protein homolog | disease resistance protein homolog [Arabidopsis thaliana]. | GGVGKTTLMQSVNNELITKGHQYDVLIWVQMSREFGECTIQQAVGARLGLSWDEKETGENRALKIYRALRQKRFLLLLDDVWEGIDLEKTGVPRPDRENKCKVMFTTRSIALCNNMGAEYKLRVEFLEKKHAWELFCSKVWRKDLLESSSIRRLAEIIVSKCGGLPLAL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 1-169 | P-loop containing nucleoside triphosphate hydrolases | GGVGKTTLMQSVNNELITKGHQYDVLIWVQMSREFGECTIQQAVGARLGLSWDEKETGENRALKIYRALRQKRFLLLLDDVWEGIDLEKTGVPRPDRENKCKVMFTTRSIALCNNMGAEYKLRVEFLEKKHAWELFCSKVWRKDLLESSSIRRLAEIIVSKCGGLPLAL |
| HMMPfam: PF00931 IPR002182
|
1-169 | NB-ARC,NBS NB-ARC
|
GGVGKTTLMQSVNNELITKGHQYDVLIWVQMSREFGECTIQQAVGARLGLSWDEKETGENRALKIYRALRQKRFLLLLDDVWEGIDLEKTGVPRPDRENKCKVMFTTRSIALCNNMGAEYKLRVEFLEKKHAWELFCSKVWRKDLLESSSIRRLAEIIVSKCGGLPLAL |
| HMMPanther: PTHR23155:SF105 | 1-89 | RPS2 (RESISTANT TO P. SYRINGAE 2),RPS2 (RESISTANT TO P. SYRINGAE 2) | GGVGKTTLMQSVNNELITKGHQYDVLIWVQMSREFGECTIQQAVGARLGLSWDEKETGENRALKIYRALRQKRFLLLLDDVWEGIDLEK |
| HMMPanther: PTHR23155 | 1-89 | FAMILY NOT NAMED,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GGVGKTTLMQSVNNELITKGHQYDVLIWVQMSREFGECTIQQAVGARLGLSWDEKETGENRALKIYRALRQKRFLLLLDDVWEGIDLEK |
| Gene3D: G3DSA:3.40.50.300 | 2-120 | no description | GVGKTTLMQSVNNELITKGHQYDVLIWVQMSREFGECTIQQAVGARLGLSWDEKETGENRALKIYRALRQKRFLLLLDDVWEGIDLEKTGVPRPDRENKCKVMFTTRSIALCNNMGAEY |
| FPrintScan: PR00364 IPR000767
|
68-82 | DISEASERSIST Disease resistance protein
|
ALRQKRFLLLLDDVW |
| FPrintScan: PR00364 IPR000767
|
162-169 | DISEASERSIST Disease resistance protein
|
CGGLPLAL |
List of References
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