PRGDB00047910 (nucleotide binding site leucine-rich repeat disease resistance protein)
| nucleotide binding site leucine-rich repeat disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 209981193 (EU939860) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Pyrus hybrid cultivar |
DNA Sequence
GGGTCGGGTAAAACAACTGCTGCCAACGCTATTTACGACAAAATTCATCATCGCTTCCAGTTTAAATGTTACCTTGGCGATGTTAGCGACACTGAACATAGATATGGTTTGGTTTATTTGCAAAAACAACTTGTTTCTAACATTTCGAAACAAACCACCCAGATAACTAGTGTCGGTGAAGGGATCTGTGTAATAAAAGGACGTCTACGACGTAGAAAAGTACTTCTTGTTGTTGATAATGTAGATAAAGTGGAGCAACTAAGTGCAATAGCTGGAGATCGGGAGTGGTTTGGTCCAGGAAGTATAATTATCATAACGACAAGAAGTGAGCATTTACTAAATCAAGTGAGAGTGAATATGAGATGTCCAGCTAAGAAAATGAATGAAGAGGAGGCTCTTGAGCTTTTCAGTTGGCATACATTTGAAAATAATTGCCCTAAAGAAGAATATCTTGAATTGTCAAAGAAGGTAGTTTCTTACTGTGGAGGATTACCCTTAGCACT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus hybrid cultivar]. | GSGKTTAANAIYDKIHHRFQFKCYLGDVSDTEHRYGLVYLQKQLVSNISKQTTQITSVGEGICVIKGRLRRRKVLLVVDNVDKVEQLSAIAGDREWFGPGSIIIITTRSEHLLNQVRVNMRCPAKKMNEEEALELFSWHTFENNCPKEEYLELSKKVVSYCGGLPLAL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF00931 IPR002182
|
1-168 | NB-ARC,NBS NB-ARC
|
GSGKTTAANAIYDKIHHRFQFKCYLGDVSDTEHRYGLVYLQKQLVSNISKQTTQITSVGEGICVIKGRLRRRKVLLVVDNVDKVEQLSAIAGDREWFGPGSIIIITTRSEHLLNQVRVNMRCPAKKMNEEEALELFSWHTFENNCPKEEYLELSKKVVSYCGGLPLAL |
| Gene3D: G3DSA:3.40.50.300 | 1-115 | G3DSA:3.40.50.300 | GSGKTTAANAIYDKIHHRFQFKCYLGDVSDTEHRYGLVYLQKQLVSNISKQTTQITSVGEGICVIKGRLRRRKVLLVVDNVDKVEQLSAIAGDREWFGPGSIIIITTRSEHLLNQ |
| superfamily: SSF52540 | 1-168 | SSF52540 | GSGKTTAANAIYDKIHHRFQFKCYLGDVSDTEHRYGLVYLQKQLVSNISKQTTQITSVGEGICVIKGRLRRRKVLLVVDNVDKVEQLSAIAGDREWFGPGSIIIITTRSEHLLNQVRVNMRCPAKKMNEEEALELFSWHTFENNCPKEEYLELSKKVVSYCGGLPLAL |
| HMMPanther: PTHR11017 | 3-168 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GKTTAANAIYDKIHHRFQFKCYLGDVSDTEHRYGLVYLQKQLVSNISKQTTQITSVGEGICVIKGRLRRRKVLLVVDNVDKVEQLSAIAGDREWFGPGSIIIITTRSEHLLNQVRVNMRCPAKKMNEEEALELFSWHTFENNCPKEEYLELSKKVVSYCGGLPLAL |
| HMMPanther: PTHR11017:SF20 | 3-168 | PTHR11017:SF20,SUBFAMILY NOT NAMED | GKTTAANAIYDKIHHRFQFKCYLGDVSDTEHRYGLVYLQKQLVSNISKQTTQITSVGEGICVIKGRLRRRKVLLVVDNVDKVEQLSAIAGDREWFGPGSIIIITTRSEHLLNQVRVNMRCPAKKMNEEEALELFSWHTFENNCPKEEYLELSKKVVSYCGGLPLAL |
| FPrintScan: PR00364 IPR000767
|
68-82 | DISEASERSIST Disease resistance protein
|
RLRRRKVLLVVDNVD |
| FPrintScan: PR00364 IPR000767
|
161-168 | DISEASERSIST Disease resistance protein
|
CGGLPLAL |
List of Contributions
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