PRGDB00047911 (nucleotide binding site leucine-rich repeat disease resistance protein)
| nucleotide binding site leucine-rich repeat disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 209981191 (EU939859) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Pyrus hybrid cultivar |
DNA Sequence
GGTTCCGGAAAAACAACTGCTGCTGACGCCATTTATAACAAAATTCATCATCGCTTCGAGTTTAAATGTCACCTTGGCGATGTTAGCGACTTTGAACATCGATATGGTTTGGTTTGTTTGCAAAAACAACTTGTTTCTCACATTTTGAAACAAACCACCATATTCCAGATAAATAGTGTCAGTGAAGGGATCAGTGTAATAAAACGACATCTTCGACGTCGAAAGGTACTTATTGTTATTGATAATGTAGATAAAGTGGAGCAACTAGGTGCAATAGCTGGAGATCGTGAGTGGTTTGGTCCAGGAAGTATAATTATCATAACAACAAGAGATGAGCATTTACTAAATCAAGTGAGAGTGAATATGAGATATCCAGCTAAGAAAATGAATGAAGAGGAAGCTCTTGAGCTTTTCAGTTGGCATTCATTTGAAAATAATTGCCCTAAAGATGAATGTCTTGAATTGTCAAGGAAGGTAGTTTCTTACTGTGGAGGTTTACCCTTAGCCCT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus hybrid cultivar]. | GSGKTTAADAIYNKIHHRFEFKCHLGDVSDFEHRYGLVCLQKQLVSHILKQTTIFQINSVSEGISVIKRHLRRRKVLIVIDNVDKVEQLGAIAGDREWFGPGSIIIITTRDEHLLNQVRVNMRYPAKKMNEEEALELFSWHSFENNCPKDECLELSRKVVSYCGGLPLAL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF00931 IPR002182
|
1-170 | NB-ARC,NBS NB-ARC
|
GSGKTTAADAIYNKIHHRFEFKCHLGDVSDFEHRYGLVCLQKQLVSHILKQTTIFQINSVSEGISVIKRHLRRRKVLIVIDNVDKVEQLGAIAGDREWFGPGSIIIITTRDEHLLNQVRVNMRYPAKKMNEEEALELFSWHSFENNCPKDECLELSRKVVSYCGGLPLAL |
| Gene3D: G3DSA:3.40.50.300 | 1-117 | G3DSA:3.40.50.300 | GSGKTTAADAIYNKIHHRFEFKCHLGDVSDFEHRYGLVCLQKQLVSHILKQTTIFQINSVSEGISVIKRHLRRRKVLIVIDNVDKVEQLGAIAGDREWFGPGSIIIITTRDEHLLNQ |
| superfamily: SSF52540 | 1-170 | SSF52540 | GSGKTTAADAIYNKIHHRFEFKCHLGDVSDFEHRYGLVCLQKQLVSHILKQTTIFQINSVSEGISVIKRHLRRRKVLIVIDNVDKVEQLGAIAGDREWFGPGSIIIITTRDEHLLNQVRVNMRYPAKKMNEEEALELFSWHSFENNCPKDECLELSRKVVSYCGGLPLAL |
| HMMPanther: PTHR11017 | 3-170 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GKTTAADAIYNKIHHRFEFKCHLGDVSDFEHRYGLVCLQKQLVSHILKQTTIFQINSVSEGISVIKRHLRRRKVLIVIDNVDKVEQLGAIAGDREWFGPGSIIIITTRDEHLLNQVRVNMRYPAKKMNEEEALELFSWHSFENNCPKDECLELSRKVVSYCGGLPLAL |
| HMMPanther: PTHR11017:SF20 | 3-170 | PTHR11017:SF20,SUBFAMILY NOT NAMED | GKTTAADAIYNKIHHRFEFKCHLGDVSDFEHRYGLVCLQKQLVSHILKQTTIFQINSVSEGISVIKRHLRRRKVLIVIDNVDKVEQLGAIAGDREWFGPGSIIIITTRDEHLLNQVRVNMRYPAKKMNEEEALELFSWHSFENNCPKDECLELSRKVVSYCGGLPLAL |
| FPrintScan: PR00364 IPR000767
|
70-84 | DISEASERSIST Disease resistance protein
|
HLRRRKVLIVIDNVD |
| FPrintScan: PR00364 IPR000767
|
163-170 | DISEASERSIST Disease resistance protein
|
CGGLPLAL |
List of Contributions
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