PRGDB00047938 (nucleotide binding site leucine-rich repeat disease resistance protein)
| nucleotide binding site leucine-rich repeat disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 209981137 (EU939832) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Pyrus pyrifolia |
DNA Sequence
GGATCAGGAAAAACAACAGCTGTCAACGCCATTTATAACAAAATTCATCACAAGTTCCAGTTCAAAAGTTTCCTCGCCGACGTTCGCGATACTGCAAGTAAATATGGTCTGGTTAATGTGCAAGAAAAACTTGTTTCTGACATCTTGCAAGAACCCACCAAGTTCCAGATAAACAATGTCAATGCAGGGATCAGTGTAATAAAACAACATCTTCGACGTAGAAAGGTACTTCTTGTTATCGATAATATCGATAAAATGGACCAACTAAATGCAATAGCTGGAAATCATAATTGGTTTGGACCAGGAAGTAGAATTATCATAACAACAAGAGATGAACATTTACTAAAGCAAGTGGATAAGACATATGCGGCTCAAAAATTGAATGCACGAGAAGCTCTGGAGCTCTTTAGTTGGCATGCCTTTGAAAATAATTGGCCTAATGAAGAATATCTTGAAGTCTCAAAAAAGGTTGTTTCTTACTCTGGAGGTTTACCCTTAGCCCT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus pyrifolia]. | GSGKTTAVNAIYNKIHHKFQFKSFLADVRDTASKYGLVNVQEKLVSDILQEPTKFQINNVNAGISVIKQHLRRRKVLLVIDNIDKMDQLNAIAGNHNWFGPGSRIIITTRDEHLLKQVDKTYAAQKLNAREALELFSWHAFENNWPNEEYLEVSKKVVSYSGGLPLAL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPfam: PF00931 IPR002182
|
1-168 | NB-ARC,NBS NB-ARC
|
GSGKTTAVNAIYNKIHHKFQFKSFLADVRDTASKYGLVNVQEKLVSDILQEPTKFQINNVNAGISVIKQHLRRRKVLLVIDNIDKMDQLNAIAGNHNWFGPGSRIIITTRDEHLLKQVDKTYAAQKLNAREALELFSWHAFENNWPNEEYLEVSKKVVSYSGGLPLAL |
| superfamily: SSF52540 | 1-168 | SSF52540 | GSGKTTAVNAIYNKIHHKFQFKSFLADVRDTASKYGLVNVQEKLVSDILQEPTKFQINNVNAGISVIKQHLRRRKVLLVIDNIDKMDQLNAIAGNHNWFGPGSRIIITTRDEHLLKQVDKTYAAQKLNAREALELFSWHAFENNWPNEEYLEVSKKVVSYSGGLPLAL |
| Gene3D: G3DSA:3.40.50.300 | 1-120 | G3DSA:3.40.50.300 | GSGKTTAVNAIYNKIHHKFQFKSFLADVRDTASKYGLVNVQEKLVSDILQEPTKFQINNVNAGISVIKQHLRRRKVLLVIDNIDKMDQLNAIAGNHNWFGPGSRIIITTRDEHLLKQVDK |
| HMMPanther: PTHR11017 | 3-168 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GKTTAVNAIYNKIHHKFQFKSFLADVRDTASKYGLVNVQEKLVSDILQEPTKFQINNVNAGISVIKQHLRRRKVLLVIDNIDKMDQLNAIAGNHNWFGPGSRIIITTRDEHLLKQVDKTYAAQKLNAREALELFSWHAFENNWPNEEYLEVSKKVVSYSGGLPLAL |
| HMMPanther: PTHR11017:SF20 | 3-168 | PTHR11017:SF20,SUBFAMILY NOT NAMED | GKTTAVNAIYNKIHHKFQFKSFLADVRDTASKYGLVNVQEKLVSDILQEPTKFQINNVNAGISVIKQHLRRRKVLLVIDNIDKMDQLNAIAGNHNWFGPGSRIIITTRDEHLLKQVDKTYAAQKLNAREALELFSWHAFENNWPNEEYLEVSKKVVSYSGGLPLAL |
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