PRGDB00047947 (nucleotide binding site leucine-rich repeat disease resistance protein)
| nucleotide binding site leucine-rich repeat disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 209981119 (EU939823) |
| Gene Class | TNL |
| Domain Type | NBS, LRR, TIR |
| Gene Species | Pyrus pyrifolia |
DNA Sequence
GGGTCCGGAAAAACGACGGTTGCCAAAGCCATTTTCAACAAATATCAGGATTTGTTTGTAGGTAAAAGTTTTCTTGCTAGTGTGAGAGAAGAGAAACTGGTTAAGTCGCAAAACACACTTCTTTCTGATGTATTGAGATCAGGAAACATAAAGGTTAGTAGAATTGATGAAGGGACCGAGGATATAAAAAGAAGACTTGGCAACCAAATGGTATTTGTCATAGTTGATGAGGTAGATAGCGTGAAACAGTTAGAAGCATTAGCTATAAAACGTGACTCTTTCGGCCCAGGTAGTAGAATTATTATAACCTCAAGAGACCAACATTTGCTAAAGATACTAAAAGCGAATACGATATGTCATCTACCAGCAATGAATAAAGAAGAAGCTCTTGAGCTCCTTAGTTGGCATGCCTTCGGTAATAATTATCATAATAAAGAATATCTTCATGTCTCAAGAGAAGTTGTTGATTACTGTGGAGGTTTGCCCTTAGCACT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus pyrifolia]. | GSGKTTVAKAIFNKYQDLFVGKSFLASVREEKLVKSQNTLLSDVLRSGNIKVSRIDEGTEDIKRRLGNQMVFVIVDEVDSVKQLEALAIKRDSFGPGSRIIITSRDQHLLKILKANTICHLPAMNKEEALELLSWHAFGNNYHNKEYLHVSREVVDYCGGLPLAL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 1-165 | SSF52540 | GSGKTTVAKAIFNKYQDLFVGKSFLASVREEKLVKSQNTLLSDVLRSGNIKVSRIDEGTEDIKRRLGNQMVFVIVDEVDSVKQLEALAIKRDSFGPGSRIIITSRDQHLLKILKANTICHLPAMNKEEALELLSWHAFGNNYHNKEYLHVSREVVDYCGGLPLAL |
| HMMPanther: PTHR11017:SF130 | 1-165 | PTHR11017:SF130,DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | GSGKTTVAKAIFNKYQDLFVGKSFLASVREEKLVKSQNTLLSDVLRSGNIKVSRIDEGTEDIKRRLGNQMVFVIVDEVDSVKQLEALAIKRDSFGPGSRIIITSRDQHLLKILKANTICHLPAMNKEEALELLSWHAFGNNYHNKEYLHVSREVVDYCGGLPLAL |
| HMMPanther: PTHR11017 | 1-165 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GSGKTTVAKAIFNKYQDLFVGKSFLASVREEKLVKSQNTLLSDVLRSGNIKVSRIDEGTEDIKRRLGNQMVFVIVDEVDSVKQLEALAIKRDSFGPGSRIIITSRDQHLLKILKANTICHLPAMNKEEALELLSWHAFGNNYHNKEYLHVSREVVDYCGGLPLAL |
| Gene3D: G3DSA:3.40.50.300 | 1-141 | G3DSA:3.40.50.300 | GSGKTTVAKAIFNKYQDLFVGKSFLASVREEKLVKSQNTLLSDVLRSGNIKVSRIDEGTEDIKRRLGNQMVFVIVDEVDSVKQLEALAIKRDSFGPGSRIIITSRDQHLLKILKANTICHLPAMNKEEALELLSWHAFGNN |
| HMMPfam: PF00931 IPR002182
|
1-165 | NB-ARC,NBS NB-ARC
|
GSGKTTVAKAIFNKYQDLFVGKSFLASVREEKLVKSQNTLLSDVLRSGNIKVSRIDEGTEDIKRRLGNQMVFVIVDEVDSVKQLEALAIKRDSFGPGSRIIITSRDQHLLKILKANTICHLPAMNKEEALELLSWHAFGNNYHNKEYLHVSREVVDYCGGLPLAL |
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