PRGDB00047950 (nucleotide binding site leucine-rich repeat disease resistance protein)
nucleotide binding site leucine-rich repeat disease resistance protein | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 209981113 (EU939820) |
Gene Class | NL |
Domain Type | NBS, LRR |
Gene Species | Pyrus pyrifolia |
DNA Sequence
GGATCTGGTAAAACAACATCTGCGAAAGCCATTTCTAACAAAATTCATCATAAGTTCCAGTTCAAATGTATCCTTGCCGACGTTCGCGACAATACAAGTAAACATGGTCTGGCTTATTTGCAAGAAAAACTTATTTTTGACATCTCGAAACAGAAGTCTGAAATAAGCAGTGTTGATAAAGGTATCAGTCTGATAGAAGATCAATTTTCACATAGAAAGGTACTTGTCATCATAGACAACATAGATGAAGTGGAACAACTGAATGCAATAGCTGGAAATCACAAATGGTTTGGTCCTGGAAGTAGAATTATCATAACGACACGAGATGAACATTTACTAAAGCAAGGGAAAGTGAACAAGACATATCCGGCTCAGGAATTGAATAAAGAAGAAGCTCTAGAGCTCTTGAGTTGGCATGCCTTTGGAAATCGACAGCCTAGCGAAGGATTTCTTGAACTCTCAGAAAAGTTTGTTTCTTACTGTGATGGTTTACCATTAGCCCT
Protein sequences
Name | Description | Sequence |
---|---|---|
nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus pyrifolia]. | GSGKTTSAKAISNKIHHKFQFKCILADVRDNTSKHGLAYLQEKLIFDISKQKSEISSVDKGISLIEDQFSHRKVLVIIDNIDEVEQLNAIAGNHKWFGPGSRIIITTRDEHLLKQGKVNKTYPAQELNKEEALELLSWHAFGNRQPSEGFLELSEKFVSYCDGLPLAL |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF52540 | 1-168 | SSF52540 | GSGKTTSAKAISNKIHHKFQFKCILADVRDNTSKHGLAYLQEKLIFDISKQKSEISSVDKGISLIEDQFSHRKVLVIIDNIDEVEQLNAIAGNHKWFGPGSRIIITTRDEHLLKQGKVNKTYPAQELNKEEALELLSWHAFGNRQPSEGFLELSEKFVSYCDGLPLAL |
HMMPfam: PF00931 IPR002182
|
1-168 | NB-ARC,NBS NB-ARC
|
GSGKTTSAKAISNKIHHKFQFKCILADVRDNTSKHGLAYLQEKLIFDISKQKSEISSVDKGISLIEDQFSHRKVLVIIDNIDEVEQLNAIAGNHKWFGPGSRIIITTRDEHLLKQGKVNKTYPAQELNKEEALELLSWHAFGNRQPSEGFLELSEKFVSYCDGLPLAL |
Gene3D: G3DSA:3.40.50.300 | 1-115 | G3DSA:3.40.50.300 | GSGKTTSAKAISNKIHHKFQFKCILADVRDNTSKHGLAYLQEKLIFDISKQKSEISSVDKGISLIEDQFSHRKVLVIIDNIDEVEQLNAIAGNHKWFGPGSRIIITTRDEHLLKQ |
HMMPanther: PTHR11017 | 3-168 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GKTTSAKAISNKIHHKFQFKCILADVRDNTSKHGLAYLQEKLIFDISKQKSEISSVDKGISLIEDQFSHRKVLVIIDNIDEVEQLNAIAGNHKWFGPGSRIIITTRDEHLLKQGKVNKTYPAQELNKEEALELLSWHAFGNRQPSEGFLELSEKFVSYCDGLPLAL |
HMMPanther: PTHR11017:SF20 | 3-168 | PTHR11017:SF20,SUBFAMILY NOT NAMED | GKTTSAKAISNKIHHKFQFKCILADVRDNTSKHGLAYLQEKLIFDISKQKSEISSVDKGISLIEDQFSHRKVLVIIDNIDEVEQLNAIAGNHKWFGPGSRIIITTRDEHLLKQGKVNKTYPAQELNKEEALELLSWHAFGNRQPSEGFLELSEKFVSYCDGLPLAL |
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