PRGDB00047952 (nucleotide binding site leucine-rich repeat disease resistance protein)
nucleotide binding site leucine-rich repeat disease resistance protein | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 209981109 (EU939818) |
Gene Class | TNL |
Domain Type | NBS, LRR, TIR, Others |
Gene Species | Pyrus pyrifolia |
DNA Sequence
GGATCCGGTAAAACAACAATTGCTAAAGCCATTTATAACCAATTTTGTGACAAGTTTGAAGGTAAGAGTTTCCTTGAAAACATGAGGGGAAAGAACCTAGTTAACTTGCAAAACCAACTTCTTTCTGATATCTTGCAAACTAAGACAAAAGTAAGCAGTATTGCCAAAGGGACCGCCTTGGTAGGGAAAAGATTTCGATGCTTAAGAGTACTTGTCATCTTGGATGATGTAGATGATTTGAAGCAACTAGACGAATTAGTTGTAAATCGCCACTCTTTTGGTCTGGGGAGCAGAATTATCATAACAACAAGAAATGAACATGTGTTAAATGAATTTGCAGTTGATGTGATATATCGGTCACAAGGAATGGAACGAGAAGAAGCTCTTGAGCTTTTTAGTTGGCATGCTTTCAGAAGTAGTTGTTGTCCTAGAAAATATCTGAACCTCGCAAGAGAAGTTGTCGATTACTGTGGAGGTTTGCCCTTAGCCCT
Protein sequences
Name | Description | Sequence |
---|---|---|
nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus pyrifolia]. | GSGKTTIAKAIYNQFCDKFEGKSFLENMRGKNLVNLQNQLLSDILQTKTKVSSIAKGTALVGKRFRCLRVLVILDDVDDLKQLDELVVNRHSFGLGSRIIITTRNEHVLNEFAVDVIYRSQGMEREEALELFSWHAFRSSCCPRKYLNLAREVVDYCGGLPLAL |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR11017:SF130 | 1-164 | PTHR11017:SF130,DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | GSGKTTIAKAIYNQFCDKFEGKSFLENMRGKNLVNLQNQLLSDILQTKTKVSSIAKGTALVGKRFRCLRVLVILDDVDDLKQLDELVVNRHSFGLGSRIIITTRNEHVLNEFAVDVIYRSQGMEREEALELFSWHAFRSSCCPRKYLNLAREVVDYCGGLPLAL |
HMMPanther: PTHR11017 | 1-164 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GSGKTTIAKAIYNQFCDKFEGKSFLENMRGKNLVNLQNQLLSDILQTKTKVSSIAKGTALVGKRFRCLRVLVILDDVDDLKQLDELVVNRHSFGLGSRIIITTRNEHVLNEFAVDVIYRSQGMEREEALELFSWHAFRSSCCPRKYLNLAREVVDYCGGLPLAL |
HMMPfam: PF00931 IPR002182
|
1-164 | NB-ARC,NBS NB-ARC
|
GSGKTTIAKAIYNQFCDKFEGKSFLENMRGKNLVNLQNQLLSDILQTKTKVSSIAKGTALVGKRFRCLRVLVILDDVDDLKQLDELVVNRHSFGLGSRIIITTRNEHVLNEFAVDVIYRSQGMEREEALELFSWHAFRSSCCPRKYLNLAREVVDYCGGLPLAL |
Gene3D: G3DSA:3.40.50.300 | 1-106 | G3DSA:3.40.50.300 | GSGKTTIAKAIYNQFCDKFEGKSFLENMRGKNLVNLQNQLLSDILQTKTKVSSIAKGTALVGKRFRCLRVLVILDDVDDLKQLDELVVNRHSFGLGSRIIITTRNE |
superfamily: SSF52540 | 1-164 | SSF52540 | GSGKTTIAKAIYNQFCDKFEGKSFLENMRGKNLVNLQNQLLSDILQTKTKVSSIAKGTALVGKRFRCLRVLVILDDVDDLKQLDELVVNRHSFGLGSRIIITTRNEHVLNEFAVDVIYRSQGMEREEALELFSWHAFRSSCCPRKYLNLAREVVDYCGGLPLAL |
FPrintScan: PR00364 IPR000767
|
64-78 | DISEASERSIST Disease resistance protein
|
RFRCLRVLVILDDVD |
FPrintScan: PR00364 IPR000767
|
157-164 | DISEASERSIST Disease resistance protein
|
CGGLPLAL |
List of Contributions
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