PRGDB00047953 (nucleotide binding site leucine-rich repeat disease resistance protein)
nucleotide binding site leucine-rich repeat disease resistance protein | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 209981107 (EU939817) |
Gene Class | NL |
Domain Type | NBS, LRR, Others |
Gene Species | Pyrus pyrifolia |
DNA Sequence
GGATCCGGTAAAACGACAGCTGCCAAAGCCATCTATAACAAAATTCATCATGAGTTCCAATTCAAAAGCTTCCTTGACAACGTTAGTGAAAAAGATCTGGTTGTTTCGCAAAAAAAACTTGTTTCTGACATCTTGAAACAGACCAAGCTTGAGATAACCAGTGTTGATGAAGGTATCAGTCTGATAAAACATCATCTCCAAAGAAGAAGAGTACTTGTCATTATTGACAATGTAGACAAAGTGGAACAACTAAATGCAATAGCTGGAAATCGTGATTGGTTTGGCCCAGGAAGTGGAATTATCATAACGACACGAGATGAATGTTTACTAAAGCAAGTGAAAATGAAAGTGGACAAGACATATCCGCTTAAGGAAATGAATGAAGAAGAAGCTCTGAAACTCTTTAGTTGGCATGCCTTTGGAAGTAGTTGTCCTAATGAAGGATATCTTGAACTCTCAAAAGAGGTTGTTTCTTACTGTGGTGGTTTACCCTTAGCTCT
Protein sequences
Name | Description | Sequence |
---|---|---|
nucleotide binding site leucine-rich repeat disease resistance protein | nucleotide binding site leucine-rich repeat disease resistance protein [Pyrus pyrifolia]. | GSGKTTAAKAIYNKIHHEFQFKSFLDNVSEKDLVVSQKKLVSDILKQTKLEITSVDEGISLIKHHLQRRRVLVIIDNVDKVEQLNAIAGNRDWFGPGSGIIITTRDECLLKQVKMKVDKTYPLKEMNEEEALKLFSWHAFGSSCPNEGYLELSKEVVSYCGGLPLAL |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPfam: PF00931 IPR002182
|
1-167 | NB-ARC,NBS NB-ARC
|
GSGKTTAAKAIYNKIHHEFQFKSFLDNVSEKDLVVSQKKLVSDILKQTKLEITSVDEGISLIKHHLQRRRVLVIIDNVDKVEQLNAIAGNRDWFGPGSGIIITTRDECLLKQVKMKVDKTYPLKEMNEEEALKLFSWHAFGSSCPNEGYLELSKEVVSYCGGLPLAL |
Gene3D: G3DSA:3.40.50.300 | 1-110 | G3DSA:3.40.50.300 | GSGKTTAAKAIYNKIHHEFQFKSFLDNVSEKDLVVSQKKLVSDILKQTKLEITSVDEGISLIKHHLQRRRVLVIIDNVDKVEQLNAIAGNRDWFGPGSGIIITTRDECLL |
superfamily: SSF52540 | 1-167 | SSF52540 | GSGKTTAAKAIYNKIHHEFQFKSFLDNVSEKDLVVSQKKLVSDILKQTKLEITSVDEGISLIKHHLQRRRVLVIIDNVDKVEQLNAIAGNRDWFGPGSGIIITTRDECLLKQVKMKVDKTYPLKEMNEEEALKLFSWHAFGSSCPNEGYLELSKEVVSYCGGLPLAL |
HMMPanther: PTHR11017 | 3-167 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GKTTAAKAIYNKIHHEFQFKSFLDNVSEKDLVVSQKKLVSDILKQTKLEITSVDEGISLIKHHLQRRRVLVIIDNVDKVEQLNAIAGNRDWFGPGSGIIITTRDECLLKQVKMKVDKTYPLKEMNEEEALKLFSWHAFGSSCPNEGYLELSKEVVSYCGGLPLAL |
HMMPanther: PTHR11017:SF20 | 3-167 | PTHR11017:SF20,SUBFAMILY NOT NAMED | GKTTAAKAIYNKIHHEFQFKSFLDNVSEKDLVVSQKKLVSDILKQTKLEITSVDEGISLIKHHLQRRRVLVIIDNVDKVEQLNAIAGNRDWFGPGSGIIITTRDECLLKQVKMKVDKTYPLKEMNEEEALKLFSWHAFGSSCPNEGYLELSKEVVSYCGGLPLAL |
FPrintScan: PR00364 IPR000767
|
65-79 | DISEASERSIST Disease resistance protein
|
HLQRRRVLVIIDNVD |
FPrintScan: PR00364 IPR000767
|
160-167 | DISEASERSIST Disease resistance protein
|
CGGLPLAL |
List of Contributions
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