PRGDB00048017 (nbs)

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nbs
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 166084781 (AM931430)
Gene Class NL
Domain Type NBS, LRR, Others
Gene Species Musa AAB Group

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Musa AAB Group partial nbs gene for NBS-LRR disease resistance protein, cultivar Pisang Rastali, clone N172_RT.

DNA Sequence

GGGATGGGGGGTGTCGGGAAGACTACTCTTGCTCAGCAAGCCTACAACCACGAGAGGGTGAAGGACTATTTTCATCCTAAGGTCTGGGTCTGTGTATCCGACAACTTCAACGTGGAGAGGCTTACCAAAGAGATCATAGAATCCTTGACCCGAAAAAGGTGTGATCTCAATAACTTCGATACACTTCAGGTGGAAGTTAAGGAGAAGTTGACCTCGAAAAGGTTCCTTCTTGTCCTCGACGATGTGTGGAACGAGGACAGCCTGAAATGGGAAAGATTTTGTGCACCATTGAGGTACGGAGAACCAGGAGGCAAGATTTTGATTACAACTCGCTATAAAATGATAGCAGAAATGGTTGGCAATCCGATCCCTCTAGGGGGTCTGGATGAAGCCAGCTATTGGAAATTGTTCAAAAAATGTGCATTTGGTTCCGAAGACGCCGGTGAATTTCCACAGCTAGAAGCCATAGCAAAGAAGATCGCTGGCAGGTTGAAGGGGTTACCGTTGGCGGCAAAGACG


Protein sequences

Name Description Sequence
NBS-LRR disease resistance protein NBS-LRR disease resistance protein [Musa AAB Group].

GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGGKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKKCAFGSEDAGEFPQLEAIAKKIAGRLKGLPLAAKT

Domains

Domain Start-End Description Sequence

Gene3D: G3DSA:3.40.50.300
1-85 G3DSA:3.40.50.300

GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNE

superfamily: SSF52540
1-173 SSF52540

GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGGKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKKCAFGSEDAGEFPQLEAIAKKIAGRLKGLPLAAKT

HMMPanther: PTHR11017
1-172 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGGKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKKCAFGSEDAGEFPQLEAIAKKIAGRLKGLPLAAK

HMMPanther: PTHR11017:SF28
1-172 PTHR11017:SF28

GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGGKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKKCAFGSEDAGEFPQLEAIAKKIAGRLKGLPLAAK

HMMPfam: PF00931
IPR002182
1-172 NB-ARC,NBS
NB-ARC

GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGGKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKKCAFGSEDAGEFPQLEAIAKKIAGRLKGLPLAAK

FPrintScan: PR00364
IPR000767
69-83 DISEASERSIST
Disease resistance protein

KLTSKRFLLVLDDVW

FPrintScan: PR00364
IPR000767
164-173 DISEASERSIST
Disease resistance protein

LKGLPLAAKT


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Analyses

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