PRGDB00048025 (nbs)

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nbs
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 166084762 (AM931419)
Gene Class NL
Domain Type NBS, LRR
Gene Species Musa ornata

Comment?

Musa ornata partial nbs gene for truncated NBS-LRR disease resistance protein, clone N112_OR.

DNA Sequence

GGAATGGGTGGGGTGGGGAAAACTACTCTGGCTCAGCAAGCCTACCACCACGAGAGGGTGAACAACTATTTTCAACCTAAGGTCTGGCTCTGTGTATCGGATAACTTCAACGTGGAGAGGCTTACCAAAGACATCGTAAAATTCATAACCGAGGAAAAGTGCGATATCTGCAACCTTGATAACACTTCAAGTGGTTGTTAA


Protein sequences

Name Description Sequence
truncated NBS-LRR disease resistance protein truncated NBS-LRR disease resistance protein [Musa ornata].

GMGGVGKTTLAQQAYHHERVNNYFQPKVWLCVSDNFNVERLTKDIVKFITEEKCDICNLDNTSSGC


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR23155:SF121
1-55 PTHR23155:SF121,SUBFAMILY NOT NAMED

GMGGVGKTTLAQQAYHHERVNNYFQPKVWLCVSDNFNVERLTKDIVKFITEEKCD

HMMPanther: PTHR23155
1-55 PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GMGGVGKTTLAQQAYHHERVNNYFQPKVWLCVSDNFNVERLTKDIVKFITEEKCD

superfamily: SSF52540
1-49 SSF52540

GMGGVGKTTLAQQAYHHERVNNYFQPKVWLCVSDNFNVERLTKDIVKFI

HMMPfam: PF00931
IPR002182
1-61 NB-ARC,NBS
NB-ARC

GMGGVGKTTLAQQAYHHERVNNYFQPKVWLCVSDNFNVERLTKDIVKFITEEKCDICNLDN


List of References

M Azhar, J S Heslop-Harrison
Genomes, diversity and resistance gene analogues in Musa species.
Cytogenet. Genome Res.: 2008, 121(1);59-66
PubMed:18544928 WorldCat.org DOI (I p)





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Analyses

Blast

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