PRGDB00048040 (nbs)

nbs
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	166084732 (AM931403)
Gene Class	N
Domain Type	NBS
Gene Species	Musa textilis
	Comment?

Musa textilis partial nbs gene for truncated NBS-LRR disease resistance protein, clone N432_TT.

DNA Sequence

GGCATGGGGGGTGTTGGAAAGACAGTGCTAGCGCAGATGGTCTTCAACAGTCCGCAGGTGAGAAGGCGCTTCTTTCCGCGGCTATGGGTGTGCATGTCTCAGACGGTGAAAGGAGGTAGAGATGTCCGACGAGAGATGTTGGAGAGGATGCTAATGGCACTGGGAGTCGAGGAGGAGGCCATCACATCCATCTCAGAAGCCGGTGCAGGAAGCGGTGGCCTCGCCGAGTTGACGCTCGCGCTCCACCTCCAATTGATGAACAAAAGATATCTCATCGTCTTCCACGACGTCTGGAACATCGACGAGTGA

Protein sequences

Name	Description	Sequence
truncated NBS-LRR disease resistance protein	truncated NBS-LRR disease resistance protein [Musa textilis].	GMGGVGKTVLAQMVFNSPQVRRRFFPRLWVCMSQTVKGGRDVRREMLERMLMALGVEEEAITSISEAGAGSGGLAELTLALHLQLMNKRYLIVFHDVWNIDE

Domains

Domain	Start-End	Description	Sequence
HMMPfam: PF00931 IPR002182	1-99	NB-ARC,NBS NB-ARC	GMGGVGKTVLAQMVFNSPQVRRRFFPRLWVCMSQTVKGGRDVRREMLERMLMALGVEEEAITSISEAGAGSGGLAELTLALHLQLMNKRYLIVFHDVWN
superfamily: SSF52540	1-100	SSF52540	GMGGVGKTVLAQMVFNSPQVRRRFFPRLWVCMSQTVKGGRDVRREMLERMLMALGVEEEAITSISEAGAGSGGLAELTLALHLQLMNKRYLIVFHDVWNI

List of References

M Azhar, J S Heslop-Harrison
Genomes, diversity and resistance gene analogues in Musa species.
Cytogenet. Genome Res.: 2008, 121(1);59-66
PubMed:18544928 WorldCat.org DOI (I p)

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Analyses

Blast

Blast matches against Reference R-Genes. Show