PRGDB00048063 (nbs)
nbs | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 166084686 (AM931380) |
Gene Class | NL |
Domain Type | NBS, LRR |
Gene Species | Musa acuminata subsp. malaccensis |
DNA Sequence
GGGATGGGGGGGGTTGGGAAGACTACTCTTGCTCAGCAAGCCTACAACCACGAGAGGGTGAAGGACTATTTTCATCCTAAGGTCTGGGTCTGTGTATCCGACAACTTCAACGTGGAGAGGCTTACAAAAGAGATCATAGAATCCTTAACCCGAAAAAGGTGTGATCTCAATAACTTCGATACACTTCAAGTGGAAGTTAAGGAGAAGTTGACCTCAAAAAGGTTCCTTCTTGTCCTCGACGATGTGTGGAACGAGGACAGCCAGAAATGGGAAAGATTTTGTGCACCATTGAGGTACGGAGAACCAGGAAGCAAGATTTTGATTACAACTCGCTATAAAATGATAGCAGAAATGGTTGGCAATCCGATCCCTCTAGGAGGTCTGGATGAAGCCAGCTATTGGAAATTGTTCAAAACATGTGCATTTGGTTCCGAAGACGCCGGTGAATTTCCACATCTAGAAGCCATAGCAAAGAAGATCGCTGGCAGGTTGAAGGGTTCCCGTTGGCGGCAAAGACG
Protein sequences
Name | Description | Sequence |
---|---|---|
NBS-LRR disease resistance protein | NBS-LRR disease resistance protein [Musa acuminata subsp. malaccensis]. | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKTCAFGSEDAGEFPHLEAIAKKIAGRLKGSRWRQRR |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR23155 | 1-108 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILI |
HMMPanther: PTHR23155:SF121 | 1-108 | PTHR23155:SF121,SUBFAMILY NOT NAMED | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILI |
superfamily: SSF52540 | 1-161 | SSF52540 | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKTCAFGSEDAGEFPHLEAIAKKIA |
HMMPfam: PF00931 IPR002182
|
1-166 | NB-ARC,NBS NB-ARC
|
GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKTCAFGSEDAGEFPHLEAIAKKIAGRLKG |
Gene3D: G3DSA:3.40.50.300 | 1-87 | G3DSA:3.40.50.300 | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDS |
List of References
M Azhar, J S Heslop-Harrison
Genomes, diversity and resistance gene analogues in Musa species.
Cytogenet. Genome Res.: 2008, 121(1);59-66
PubMed:18544928
WorldCat.org
DOI
(I p)
List of Contributions
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