PRGDB00048063 (nbs)
| nbs | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 166084686 (AM931380) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Musa acuminata subsp. malaccensis |
DNA Sequence
GGGATGGGGGGGGTTGGGAAGACTACTCTTGCTCAGCAAGCCTACAACCACGAGAGGGTGAAGGACTATTTTCATCCTAAGGTCTGGGTCTGTGTATCCGACAACTTCAACGTGGAGAGGCTTACAAAAGAGATCATAGAATCCTTAACCCGAAAAAGGTGTGATCTCAATAACTTCGATACACTTCAAGTGGAAGTTAAGGAGAAGTTGACCTCAAAAAGGTTCCTTCTTGTCCTCGACGATGTGTGGAACGAGGACAGCCAGAAATGGGAAAGATTTTGTGCACCATTGAGGTACGGAGAACCAGGAAGCAAGATTTTGATTACAACTCGCTATAAAATGATAGCAGAAATGGTTGGCAATCCGATCCCTCTAGGAGGTCTGGATGAAGCCAGCTATTGGAAATTGTTCAAAACATGTGCATTTGGTTCCGAAGACGCCGGTGAATTTCCACATCTAGAAGCCATAGCAAAGAAGATCGCTGGCAGGTTGAAGGGTTCCCGTTGGCGGCAAAGACG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR disease resistance protein | NBS-LRR disease resistance protein [Musa acuminata subsp. malaccensis]. | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKTCAFGSEDAGEFPHLEAIAKKIAGRLKGSRWRQRR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 1-108 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILI |
| HMMPanther: PTHR23155:SF121 | 1-108 | PTHR23155:SF121,SUBFAMILY NOT NAMED | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILI |
| superfamily: SSF52540 | 1-161 | SSF52540 | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKTCAFGSEDAGEFPHLEAIAKKIA |
| HMMPfam: PF00931 IPR002182
|
1-166 | NB-ARC,NBS NB-ARC
|
GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDSQKWERFCAPLRYGEPGSKILITTRYKMIAEMVGNPIPLGGLDEASYWKLFKTCAFGSEDAGEFPHLEAIAKKIAGRLKG |
| Gene3D: G3DSA:3.40.50.300 | 1-87 | G3DSA:3.40.50.300 | GMGGVGKTTLAQQAYNHERVKDYFHPKVWVCVSDNFNVERLTKEIIESLTRKRCDLNNFDTLQVEVKEKLTSKRFLLVLDDVWNEDS |
List of References
List of Contributions
There has not been any contribution yet.
