PRGDB00048091 (nbs)
| nbs | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 166084630 (AM931352) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Musa balbisiana |
DNA Sequence
GGCATGGGCGGGGTTGGGAAAACTACTCTCGTTCAGCAAGCCTACAACCACGAGAGGGTGCAGGACTATTTTCATCCTAAGGTCAGGGTCTGTGTATCCGACAACTTCAACTTGGAGAGGCTTACCAAAGACATCATAGAATCCATAACCGAGGAAAAGTGTGATCTCAGCAACCTTGATACACTTCAAGTGGTTGTTAAGAAGAAGCTGACCTCAAAAAGGTTCCTGCTTGTCCTCGACGATGTGTGGAACGAGGACGGCGTGGAATGGGAAAGATTTTGTGCACCATTGAGCTCCGGAGAACCAGGAAGCAAGATTTTGGTTACAACTCGCTCTAGAAAGATTGCAGAAATGGTTGGCAATCCGATCCCTCTAGGAGTTCTGGATGAGGCCAGCTATTGGAAATTGTTCAAGAAATGTGCATTTGGTTCCGAATACGCCGGTGAATGTCCACAGCTAGAAGACATAGCAAAGAAGATCGTTAGCAGGTTGAAGGGTTACCGTTGGCGGCAAAGACG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR disease resistance protein | NBS-LRR disease resistance protein [Musa balbisiana]. | GMGGVGKTTLVQQAYNHERVQDYFHPKVRVCVSDNFNLERLTKDIIESITEEKCDLSNLDTLQVVVKKKLTSKRFLLVLDDVWNEDGVEWERFCAPLSSGEPGSKILVTTRSRKIAEMVGNPIPLGVLDEASYWKLFKKCAFGSEYAGECPQLEDIAKKIVSRLKGYRWRQRR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Gene3D: G3DSA:3.40.50.300 | 1-85 | G3DSA:3.40.50.300 | GMGGVGKTTLVQQAYNHERVQDYFHPKVRVCVSDNFNLERLTKDIIESITEEKCDLSNLDTLQVVVKKKLTSKRFLLVLDDVWNE |
| HMMPfam: PF00931 IPR002182
|
1-166 | NB-ARC,NBS NB-ARC
|
GMGGVGKTTLVQQAYNHERVQDYFHPKVRVCVSDNFNLERLTKDIIESITEEKCDLSNLDTLQVVVKKKLTSKRFLLVLDDVWNEDGVEWERFCAPLSSGEPGSKILVTTRSRKIAEMVGNPIPLGVLDEASYWKLFKKCAFGSEYAGECPQLEDIAKKIVSRLKG |
| HMMPanther: PTHR23155:SF121 | 1-99 | PTHR23155:SF121,SUBFAMILY NOT NAMED | GMGGVGKTTLVQQAYNHERVQDYFHPKVRVCVSDNFNLERLTKDIIESITEEKCDLSNLDTLQVVVKKKLTSKRFLLVLDDVWNEDGVEWERFCAPLSS |
| superfamily: SSF52540 | 1-168 | SSF52540 | GMGGVGKTTLVQQAYNHERVQDYFHPKVRVCVSDNFNLERLTKDIIESITEEKCDLSNLDTLQVVVKKKLTSKRFLLVLDDVWNEDGVEWERFCAPLSSGEPGSKILVTTRSRKIAEMVGNPIPLGVLDEASYWKLFKKCAFGSEYAGECPQLEDIAKKIVSRLKGYR |
| HMMPanther: PTHR23155 | 1-99 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GMGGVGKTTLVQQAYNHERVQDYFHPKVRVCVSDNFNLERLTKDIIESITEEKCDLSNLDTLQVVVKKKLTSKRFLLVLDDVWNEDGVEWERFCAPLSS |
List of References
M Azhar, J S Heslop-Harrison
Genomes, diversity and resistance gene analogues in Musa species.
Cytogenet. Genome Res.: 2008, 121(1);59-66
PubMed:18544928
WorldCat.org
DOI
(I p)
List of Contributions
There has not been any contribution yet.
