PRGDB00048108 (nbs)
| nbs | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 166084596 (AM931335) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Musa AAB Group |
DNA Sequence
GGAATGGGGGGAGTTGGTAAAACGACACTGGCTCAGAAAATATTCAATGATCCAAAGACGCAAGATATATTTCAGGTTCGGGCATGGGTTTGTGTTACACAGAAATTTTCAGAGATTGAATTGCTGAAGCAGATCATACGGGAAACCAGAGTGAACTACAGAGAAGATATGACAAAAGCGGAACTGCAACCGATGCTTAGAGATGCTGTTCGGGGAAAGAGTTTGTTTCTCGTGTTAGATGATGTGTGGCAAGCAGATGTATGGGTTGATTTGCTAAGAAATCCCGTACTACAAAGTGGAGTGGCTAATGGAAGAATTTTGGTGACCACCAGAGATGAAAACATTGCTCGCCAGATGGGGTCAGCACGCATCCATCGGGTGAAACTATTGCCGGATGATTCAGGTTGGGAACTGTTGTGCAAGAAGGCATTTGTCAGTGGAGGGGAGGAAGATATGGAGAACTTGAAGGACGTGGGCTTCGACATAGTTTCCAGATGCAAAGGCCTTCCCTTCGCTGCAAAGACG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR disease resistance protein | NBS-LRR disease resistance protein [Musa AAB Group]. | GMGGVGKTTLAQKIFNDPKTQDIFQVRAWVCVTQKFSEIELLKQIIRETRVNYREDMTKAELQPMLRDAVRGKSLFLVLDDVWQADVWVDLLRNPVLQSGVANGRILVTTRDENIARQMGSARIHRVKLLPDDSGWELLCKKAFVSGGEEDMENLKDVGFDIVSRCKGLPFAAKT |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 1-107 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GMGGVGKTTLAQKIFNDPKTQDIFQVRAWVCVTQKFSEIELLKQIIRETRVNYREDMTKAELQPMLRDAVRGKSLFLVLDDVWQADVWVDLLRNPVLQSGVANGRIL |
| HMMPanther: PTHR23155:SF121 | 1-107 | PTHR23155:SF121,SUBFAMILY NOT NAMED | GMGGVGKTTLAQKIFNDPKTQDIFQVRAWVCVTQKFSEIELLKQIIRETRVNYREDMTKAELQPMLRDAVRGKSLFLVLDDVWQADVWVDLLRNPVLQSGVANGRIL |
| superfamily: SSF52540 | 1-175 | SSF52540 | GMGGVGKTTLAQKIFNDPKTQDIFQVRAWVCVTQKFSEIELLKQIIRETRVNYREDMTKAELQPMLRDAVRGKSLFLVLDDVWQADVWVDLLRNPVLQSGVANGRILVTTRDENIARQMGSARIHRVKLLPDDSGWELLCKKAFVSGGEEDMENLKDVGFDIVSRCKGLPFAAKT |
| HMMPfam: PF00931 IPR002182
|
1-174 | NB-ARC,NBS NB-ARC
|
GMGGVGKTTLAQKIFNDPKTQDIFQVRAWVCVTQKFSEIELLKQIIRETRVNYREDMTKAELQPMLRDAVRGKSLFLVLDDVWQADVWVDLLRNPVLQSGVANGRILVTTRDENIARQMGSARIHRVKLLPDDSGWELLCKKAFVSGGEEDMENLKDVGFDIVSRCKGLPFAAK |
| Gene3D: G3DSA:3.40.50.300 | 1-119 | G3DSA:3.40.50.300 | GMGGVGKTTLAQKIFNDPKTQDIFQVRAWVCVTQKFSEIELLKQIIRETRVNYREDMTKAELQPMLRDAVRGKSLFLVLDDVWQADVWVDLLRNPVLQSGVANGRILVTTRDENIARQM |
List of References
M Azhar, J S Heslop-Harrison
Genomes, diversity and resistance gene analogues in Musa species.
Cytogenet. Genome Res.: 2008, 121(1);59-66
PubMed:18544928
WorldCat.org
DOI
(I p)
List of Contributions
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