PRGDB00048112 (nbs)
| nbs | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 166084588 (AM931331) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Musa textilis |
DNA Sequence
GGCATGGGGGGTGTGGGGAAAACTACTCTTGCTCGGCAAGCCTACAACCACGAGAGGGTGCAGGACTATTTTCAGCTTAAGGTCTGGGTCTGTGTATCTTACAACTTCAACGTGGAGAGGCTTACCAAAGAGATCATAGAATCCTTAACCCGGAAAAAGTGTCATCTTAAAAACTTTGATACACTTCAAGTGGTTGTTAAGGAGAAGTTGACCTCAAAAAGGTTCCTGCTTGTCCTCGACGATGTGTGGAACGAGGAAAGCCTGAAATGGGAAAGATTTTGTGCACCATTGAGGTCCGGAGTACCAGGAAGCAAGATTTTGGTTACAACTCGCTCTAGAAAGATTGCAGACATGGTTGGCAATCCGATCCCTCTAGATGGTCTGGATGAGGCCAGCTGTTGGAAATTGTTCAAGAAATGTGCATTTGGTTCCGAAGACGCCGGTGAATATCCACAACTAGAAGCCATAGCAAAGAAGATCGTCGGCAGGTTGAAGGGTTGCCCTTGGCGGCAAAGACG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR disease resistance protein | NBS-LRR disease resistance protein [Musa textilis]. | GMGGVGKTTLARQAYNHERVQDYFQLKVWVCVSYNFNVERLTKEIIESLTRKKCHLKNFDTLQVVVKEKLTSKRFLLVLDDVWNEESLKWERFCAPLRSGVPGSKILVTTRSRKIADMVGNPIPLDGLDEASCWKLFKKCAFGSEDAGEYPQLEAIAKKIVGRLKGCPWRQRR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR11017 | 1-168 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GMGGVGKTTLARQAYNHERVQDYFQLKVWVCVSYNFNVERLTKEIIESLTRKKCHLKNFDTLQVVVKEKLTSKRFLLVLDDVWNEESLKWERFCAPLRSGVPGSKILVTTRSRKIADMVGNPIPLDGLDEASCWKLFKKCAFGSEDAGEYPQLEAIAKKIVGRLKGCP |
| HMMPanther: PTHR11017:SF28 | 1-168 | PTHR11017:SF28 | GMGGVGKTTLARQAYNHERVQDYFQLKVWVCVSYNFNVERLTKEIIESLTRKKCHLKNFDTLQVVVKEKLTSKRFLLVLDDVWNEESLKWERFCAPLRSGVPGSKILVTTRSRKIADMVGNPIPLDGLDEASCWKLFKKCAFGSEDAGEYPQLEAIAKKIVGRLKGCP |
| superfamily: SSF52540 | 1-168 | SSF52540 | GMGGVGKTTLARQAYNHERVQDYFQLKVWVCVSYNFNVERLTKEIIESLTRKKCHLKNFDTLQVVVKEKLTSKRFLLVLDDVWNEESLKWERFCAPLRSGVPGSKILVTTRSRKIADMVGNPIPLDGLDEASCWKLFKKCAFGSEDAGEYPQLEAIAKKIVGRLKGCP |
| Gene3D: G3DSA:3.40.50.300 | 1-88 | G3DSA:3.40.50.300 | GMGGVGKTTLARQAYNHERVQDYFQLKVWVCVSYNFNVERLTKEIIESLTRKKCHLKNFDTLQVVVKEKLTSKRFLLVLDDVWNEESL |
| HMMPfam: PF00931 IPR002182
|
1-168 | NB-ARC,NBS NB-ARC
|
GMGGVGKTTLARQAYNHERVQDYFQLKVWVCVSYNFNVERLTKEIIESLTRKKCHLKNFDTLQVVVKEKLTSKRFLLVLDDVWNEESLKWERFCAPLRSGVPGSKILVTTRSRKIADMVGNPIPLDGLDEASCWKLFKKCAFGSEDAGEYPQLEAIAKKIVGRLKGCP |
List of References
M Azhar, J S Heslop-Harrison
Genomes, diversity and resistance gene analogues in Musa species.
Cytogenet. Genome Res.: 2008, 121(1);59-66
PubMed:18544928
WorldCat.org
DOI
(I p)
List of Contributions
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