PRGDB00048119 (nbs)
nbs | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 166084574 (AM931324) |
Gene Class | NL |
Domain Type | NBS, LRR |
Gene Species | Musa acuminata AAA Group |
DNA Sequence
GGAATGGGAGGTGTCGGAAAGACTACTCTTGCTCAGCAAGCCTACAACCACGAGAGGGTGAAGGACTATTTTCATCATAAGGTCTGGCTCTGTGTATCCGACAACTTCAACGTGGAGAGGCTTACCAAAGAGATCATAGAATCCTTAACCCGGAATAAGTGCGATCTAAACAACTTTGATACACTTCAAGTGGTTGTTAAGGAGGAGTTGACCTCAAAAAGGTTCCTGCTTGTCCTCGACGATGTGTGGAACGAGGACAGCCTGAAATGGGAAAGATTTTGTGCACCATTGAGGTACGGAGTACCAGGAAGCAAGATTTTGGTTACAACTCGCTCTGAAAAGATTGCAGAAATGGTTGGCAATCGGATCCATCTAGGAGGTCTGGATGAAGCCAGCTATTGGAAATTGTTCAAAAAATGTGCATTTGGTTCCGAAGACGCCGGTGAATTTCCACAGCTAGAAGCCATAGCAAAGAAGATCGTTGGCAGGTTGAAGGGTTCCCGCTGGCGGCAAAGACG
Protein sequences
Name | Description | Sequence |
---|---|---|
NBS-LRR disease resistance protein | NBS-LRR disease resistance protein [Musa acuminata AAA Group]. | GMGGVGKTTLAQQAYNHERVKDYFHHKVWLCVSDNFNVERLTKEIIESLTRNKCDLNNFDTLQVVVKEELTSKRFLLVLDDVWNEDSLKWERFCAPLRYGVPGSKILVTTRSEKIAEMVGNRIHLGGLDEASYWKLFKKCAFGSEDAGEFPQLEAIAKKIVGRLKGSRWRQRR |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR23155:SF121 | 1-98 | PTHR23155:SF121,SUBFAMILY NOT NAMED | GMGGVGKTTLAQQAYNHERVKDYFHHKVWLCVSDNFNVERLTKEIIESLTRNKCDLNNFDTLQVVVKEELTSKRFLLVLDDVWNEDSLKWERFCAPLR |
superfamily: SSF52540 | 1-161 | SSF52540 | GMGGVGKTTLAQQAYNHERVKDYFHHKVWLCVSDNFNVERLTKEIIESLTRNKCDLNNFDTLQVVVKEELTSKRFLLVLDDVWNEDSLKWERFCAPLRYGVPGSKILVTTRSEKIAEMVGNRIHLGGLDEASYWKLFKKCAFGSEDAGEFPQLEAIAKKIV |
HMMPanther: PTHR23155 | 1-98 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GMGGVGKTTLAQQAYNHERVKDYFHHKVWLCVSDNFNVERLTKEIIESLTRNKCDLNNFDTLQVVVKEELTSKRFLLVLDDVWNEDSLKWERFCAPLR |
HMMPfam: PF00931 IPR002182
|
1-166 | NB-ARC,NBS NB-ARC
|
GMGGVGKTTLAQQAYNHERVKDYFHHKVWLCVSDNFNVERLTKEIIESLTRNKCDLNNFDTLQVVVKEELTSKRFLLVLDDVWNEDSLKWERFCAPLRYGVPGSKILVTTRSEKIAEMVGNRIHLGGLDEASYWKLFKKCAFGSEDAGEFPQLEAIAKKIVGRLKG |
List of References
M Azhar, J S Heslop-Harrison
Genomes, diversity and resistance gene analogues in Musa species.
Cytogenet. Genome Res.: 2008, 121(1);59-66
PubMed:18544928
WorldCat.org
DOI
(I p)
List of Contributions
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