PRGDB00048131 (nbs)

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nbs
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 166084550 (AM931312)
Gene Class NL
Domain Type NBS, LRR, Others
Gene Species Musa acuminata AAA Group

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Musa acuminata AAA Group partial nbs gene for NBS-LRR disease resistance protein, cultivar Giant Cavendish, clone N51_GC.

DNA Sequence

GGGATGGGGGGAGTTGGGAAAACTACTCTTGCTCAGCAAGCCTACAACCACGAGAGGGTGCAGGACTATTTTCAGCATGAGGTCTGGGTCTGTGTATCAGACAACTTCAACGTGGAAAGGCTTACCAAAGAGATCATAGAATCCATAACCGAGAATAAGTGTGATCTCAGCAACCTTGATACACTTCAAGCGGTTCTTAAGAACTTGACCTCAAAAAGGTTCCTGCTTGTCCTCGACGATGTGTGGAACGAGGACAGTCTGAAATGGGAAAGATTTTGTGCACCATTGAGGTACGGAGAACCAGGAAGCAAGATTTTGGTCACAACTCGCTCTAAAAAGATTGCAAAAATGGTTGGCAATCCGATCCCTCTAGGAGGTCTGGCTGAAGCCAGCTATTGGAAATTGTTCAAGAAATGTGCATTTGGTTCCGAAGACGCCGGTGAATTTCCACATCTAGAAGCCATAGCAAAGAAGATCGCTGGCAGGTTGAAGGGGTTGCCATTGGCGGCAAAGACG


Protein sequences

Name Description Sequence
NBS-LRR disease resistance protein NBS-LRR disease resistance protein [Musa acuminata AAA Group].

GMGGVGKTTLAQQAYNHERVQDYFQHEVWVCVSDNFNVERLTKEIIESITENKCDLSNLDTLQAVLKNLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGSKILVTTRSKKIAKMVGNPIPLGGLAEASYWKLFKKCAFGSEDAGEFPHLEAIAKKIAGRLKGLPLAAKT

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR11017:SF28
1-171 PTHR11017:SF28

GMGGVGKTTLAQQAYNHERVQDYFQHEVWVCVSDNFNVERLTKEIIESITENKCDLSNLDTLQAVLKNLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGSKILVTTRSKKIAKMVGNPIPLGGLAEASYWKLFKKCAFGSEDAGEFPHLEAIAKKIAGRLKGLPLAAK

HMMPanther: PTHR11017
1-171 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GMGGVGKTTLAQQAYNHERVQDYFQHEVWVCVSDNFNVERLTKEIIESITENKCDLSNLDTLQAVLKNLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGSKILVTTRSKKIAKMVGNPIPLGGLAEASYWKLFKKCAFGSEDAGEFPHLEAIAKKIAGRLKGLPLAAK

HMMPfam: PF00931
IPR002182
1-171 NB-ARC,NBS
NB-ARC

GMGGVGKTTLAQQAYNHERVQDYFQHEVWVCVSDNFNVERLTKEIIESITENKCDLSNLDTLQAVLKNLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGSKILVTTRSKKIAKMVGNPIPLGGLAEASYWKLFKKCAFGSEDAGEFPHLEAIAKKIAGRLKGLPLAAK

Gene3D: G3DSA:3.40.50.300
1-113 G3DSA:3.40.50.300

GMGGVGKTTLAQQAYNHERVQDYFQHEVWVCVSDNFNVERLTKEIIESITENKCDLSNLDTLQAVLKNLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGSKILVTTRSKK

superfamily: SSF52540
1-172 SSF52540

GMGGVGKTTLAQQAYNHERVQDYFQHEVWVCVSDNFNVERLTKEIIESITENKCDLSNLDTLQAVLKNLTSKRFLLVLDDVWNEDSLKWERFCAPLRYGEPGSKILVTTRSKKIAKMVGNPIPLGGLAEASYWKLFKKCAFGSEDAGEFPHLEAIAKKIAGRLKGLPLAAKT

FPrintScan: PR00364
IPR000767
68-82 DISEASERSIST
Disease resistance protein

NLTSKRFLLVLDDVW

FPrintScan: PR00364
IPR000767
163-172 DISEASERSIST
Disease resistance protein

LKGLPLAAKT


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Analyses

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