PRGDB00048176 (putative disease resistance protein)
putative disease resistance protein | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 186701209 (EF197846) |
Gene Class | Unknown |
Domain Type | |
Gene Species | Arabidopsis halleri |
DNA Sequence
ATGGCATCTCTAGTAGTTAAACAACTCTTCAAATCCCTCTTCTCATTCTTCTTATTAGGTCTACTCTTCTCTGATACCGTCTTATCTTTCCGAAAAACAATTGATCAGAAAAAACCCTGCAAACATTTCTCGTTCTATTTCCATGACATCCTCTACGATGGCGACAATGTAGCAAACGCAACCTCTGCCGCTATCGTAAGCCCTCCGGGACTAGGAAACTTCAAGTTTGGTAAGTTTGTGATCTTCGATGGGCCCATAACAATGGACAAGAACTATCTCTCAAAACCCCTGGCTCGCGCACAAGGCTTCTATTTTTATGACATGAAGATGGACTTCAATGCGTGGTTTTGCTACACGTTGGTGTTTAACTCAACGGAACACAAAGGGACATTGAACATAATGGGTGCTGATTTGATGATGGAGCCAACAAGAGATCTATCGGTCGTTGGTGGGACAGGTGACTTCTTCATGGCTCGTGGGATCGCTACCTTCGTGACGGATTTATTTCAAGGGGCTAAGTATTTCAGAGTCAAGATGGATATTAAGCTCTATGAATGTTACTAG
Protein sequences
Name | Description | Sequence |
---|---|---|
putative disease resistance protein | putative disease resistance protein [Arabidopsis halleri]. | MASLVVKQLFKSLFSFFLLGLLFSDTVLSFRKTIDQKKPCKHFSFYFHDILYDGDNVANATSAAIVSPPGLGNFKFGKFVIFDGPITMDKNYLSKPLARAQGFYFYDMKMDFNAWFCYTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDFFMARGIATFVTDLFQGAKYFRVKMDIKLYECY |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR21495 | 16-187 | PTHR21495,NUCLEOPORIN-RELATED | FFLLGLLFSDTVLSFRKTIDQKKPCKHFSFYFHDILYDGDNVANATSAAIVSPPGLGNFKFGKFVIFDGPITMDKNYLSKPLARAQGFYFYDMKMDFNAWFCYTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDFFMARGIATFVTDLFQGAKYFRVKMDIKLYECY |
HMMPfam: PF03018 IPR004265
|
39-182 | Dirigent Plant disease resistance response protein
|
PCKHFSFYFHDILYDGDNVANATSAAIVSPPGLGNFKFGKFVIFDGPITMDKNYLSKPLARAQGFYFYDMKMDFNAWFCYTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDFFMARGIATFVTDLFQGAKYFRVKMDIK |
List of References
Norman Warthmann, Sandip Das, Christa Lanz, Detlef Weigel
Comparative analysis of the MIR319a microRNA locus in Arabidopsis and related Brassicaceae.
Mol. Biol. Evol.: 2008, 25(5);892-902
PubMed:18296705
WorldCat.org
DOI
(I p)
List of Contributions
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