PRGDB00048256 (OSJNBa0052O12.42-2)
OSJNBa0052O12.42-2 | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 20161828 (AP004330) |
Gene Class | Unknown |
Domain Type | Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase |
Gene Species | Oryza sativa Japonica Group |
DNA Sequence
GTGCAGAACTTCCAACAATCAAGTGATATCTCTGCAATTGCAGATAACAGAATGGCCAGTGCCTATACCTCAGAAGGCATGAGAGAATTTCTGCGGTTGACATCGTGGTGCGTGAACCCGACGAGCGAGCATCGCCCATCGATGAACTTGGTGGAGGCGGAGATAAACCGAATTCGCGAGCAAGAGATGAGGATGACCACAATCATGCCAGAAAGCACACCAACTGTGACTCTAGGTAGTCAGCTCTTCACAACATCAGGTTGAAATGAGGGAATCCATAAATTTTTCCATTCAAAGTGATGTATACAGTTTTGGTGTTTTCCTTGTGGAGTTGCTCAGTGGCAAGAGGGCTCTGTCTGATCAAAACATCATTCGATGGGCCTAAATCACCTGCATTCTCTGACACCTCCCACGGTCCATATGAACTTCAAAACGGCCAACGTCCTTGTGGATGAAGATCTCATACCCAAAGTTGCAGATGCCGGCATCCGTGCCCTGCTAGATCGATTAGGCGGTGTAGGCCCTTCATCGAGAACATCTTACGATCCTTTCCTTGATCCCAGGTAGCAGCCATGCTCCAGGTGTAAAGCTAGAATTCAAGCAGAGACTTTCCATTGCTCATGGAGCTGCTAAAGGTTAATTATCTATCGTCGATCCGTCATCGTAACCTTGTAAACCTTTTGGGGTACTGCCAGGAGAATGGAATGCAGATGCTTGTTTACGAGTATGTTCCCAATGGCAGCGTTTCTACGCATTTACATGAGCTGCAGGGAGCAAGATGTATGACTCTGGAGGAGCTAAGTTCAGCTACAAGGAACTTCAGCAATGTGAATCTTATTGGACATGGAATGTTTGGAGAGGTTTACAAGGGTTTACTCCAGGATGGCACAATTGTAGCCATTAAAAAGCGACATTCTCCTCCTAGCCATGAATTTATTCATGAGATGTCAGCAATTCTTGCAGCATCTCTAGCAGGTGCTGCAGGATTCTTGGCATTAGTAGGCGCCGCCATATTTCTTATAGTACTTTTCCTCCGGCACCGCAGAAGAGCTTCAGACTCTTCGGAAAGTAGTTCATCCAGTCCAGCTCAACCAG
Protein sequences
Name | Description | Sequence |
---|---|---|
putative disease resistance protein kinase | putative disease resistance protein kinase [Oryza sativa Japonica Group]. | MSAILAASLAGAAGFLALVGAAIFLIVLFLRHRRRASDSSESSSSSPAQPELQGARCMTLEELSSATRNFSNVNLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSMNLVEAEINRIREQEMRMTTIMPESTPTVTLGSQLFTTSG |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
Seg: seg | 2-28 | seg | SAILAASLAGAAGFLALVGAAIFLIVL |
HMMPanther: PTHR24420 | 7-351 | FAMILY NOT NAMED,FAMILY NOT NAMED | ASLAGAAGFLALVGAAIFLIVLFLRHRRRASDSSESSSSSPAQPELQGARCMTLEELSSATRNFSNVNLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSMNLVEAEINRIREQEMRMTTIMPESTP |
HMMPanther: PTHR24420:SF451 | 7-351 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | ASLAGAAGFLALVGAAIFLIVLFLRHRRRASDSSESSSSSPAQPELQGARCMTLEELSSATRNFSNVNLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSMNLVEAEINRIREQEMRMTTIMPESTP |
Gene3D: G3DSA:3.30.200.20 | 23-128 | no description | IFLIVLFLRHRRRASDSSESSSSSPAQPELQGARCMTLEELSSATRNFSNVNLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLG |
Seg: seg | 37-46 | seg | SDSSESSSSS |
superfamily: SSF56112 IPR011009
|
42-352 | Protein kinase-like (PK-like) Protein kinase-like domain
|
SSSSSPAQPELQGARCMTLEELSSATRNFSNVNLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSMNLVEAEINRIREQEMRMTTIMPESTPT |
ProfileScan: PS50011 IPR000719
|
70-335 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSNVNLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSMNLVEAEINRI |
HMMSmart: SM00220 IPR002290
|
70-335 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FSNVNLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSMNLVEAEINRI |
HMMSmart: SM00219 IPR020635
|
70-332 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSNVNLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSMNLVEAEI |
HMMPfam: PF07714 IPR001245
|
74-328 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
NLIGHGMFGEVYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSMNLV |
PatternScan: PS00107 IPR017441
|
76-99 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGHGMFGEVYKGLLQDGTIVAIKK |
Gene3D: G3DSA:1.10.510.10 | 129-325 | no description | YCQENGMQMLVYEYVPNGSVSTHLHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPTVHMNFKTANVLVDEDLIPKVADAGIRALLDRLGGVGPSSRTSYDPFLDPRMRESINFSIQSDVYSFGVFLVELLSGKRALSDQNIIRWVQNFQQSSDISAIADNRMASAYTSEGMREFLRLTSWCVNPTSEHRPSM |
List of References
Takuji Sasaki, Takashi Matsumoto, Kimiko Yamamoto, Katsumi Sakata, Tomoya Baba, Yuichi Katayose, Jianzhong Wu, Yoshihito Niimura, Zhukuan Cheng, Yoshiaki Nagamura, Baltazar A Antonio, Hiroyuki Kanamori, Satomi Hosokawa, Masatoshi Masukawa, Koji Arikawa, Yoshino Chiden, Mika Hayashi, Masako Okamoto, Tsuyu Ando, Hiroyoshi Aoki, Kohei Arita, Masao Hamada, Chizuko Harada, Saori Hijishita, Mikiko Honda, Yoko Ichikawa, Atsuko Idonuma, Masumi Iijima, Michiko Ikeda, Maiko Ikeno, Sachie Ito, Tomoko Ito, Yuichi Ito, Yukiyo Ito, Aki Iwabuchi, Kozue Kamiya, Wataru Karasawa, Satoshi Katagiri, Ari Kikuta, Noriko Kobayashi, Izumi Kono, Kayo Machita, Tomoko Maehara, Hiroshi Mizuno, Tatsumi Mizubayashi, Yoshiyuki Mukai, Hideki Nagasaki, Marina Nakashima, Yuko Nakama, Yumi Nakamichi, Mari Nakamura, Nobukazu Namiki, Manami Negishi, Isamu Ohta, Nozomi Ono, Shoko Saji, Kumiko Sakai, Michie Shibata, Takanori Shimokawa, Ayahiko Shomura, Jianyu Song, Yuka Takazaki, Kimihiro Terasawa, Kumiko Tsuji, Kazunori Waki, Harumi Yamagata, Hiroko Yamane, Shoji Yoshiki, Rie Yoshihara, Kazuko Yukawa, Huisun Zhong, Hisakazu Iwama, Toshinori Endo, Hidetaka Ito, Jang Ho Hahn, Ho-Il Kim, Moo-Young Eun, Masahiro Yano, Jiming Jiang, Takashi Gojobori
The genome sequence and structure of rice chromosome 1.
Nature: 2002, 420(6913);312-6
PubMed:12447438
WorldCat.org
DOI
(P p)
List of Contributions
There has not been any contribution yet.