PRGDB00048328 (NBS-LRR type disease resistance protein)
| NBS-LRR type disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 149929293 (EF641117) |
| Gene Class | N |
| Domain Type | NBS |
| Gene Species | Ipomoea batatas |
DNA Sequence
GGTGGGGTTGGGAAGACAACTAAAATATTGCTTGGCGTTGCGGGCAAATGTATCCAAAATGAGTCTCATCTCACTAAAGCAGTTTATGATGACTCTTTTATTGAGCATTACTTTAAGTTACAAGATGAAATTATCAAAACTGTAGGTCTTACAATTTATGAGGAGAATGAAGAGCAAAGGGCTGCTATTTTACACAACCACTTAGTGAGGAATAATGTGCTCGTTTTGGATGATAAATTGGGTGTCCCCCTTATGGTTAAGGGTTGCAAGCTCATTTTAACTACTCAATCACTAGATGTGTGTAGTGTGGGACAATATTCATTTGGAGGTAGGATTGGATGTCAAAATTTGTTCAAAGTTAATGTTCTTGATGAGGAGGAAGCTTGGAATTTGTTCAAGGAGATCTTTTTACAAGATGGTCATACTGTGCTCACCCATACTATTGGAAAACATGCCAAAGAATTGACCAAAAAGTGTGGGGGCTTACCATTGGCACTCAACATGCTGGTAAGCTACAAGCCGAAGGTGAATGATGATCGCATTTGGAGGAATGCCATTAAGAATTTCCAAAATGCTTCTCTTCAAATGGAAGACTTGGAAAATAATGTGTTTGAAATACTCAAATTTAGCTACGACAGATTGACTGATCCAAGTTTGAAGATCGAGTTATTAAAATTAGCTTGCAACCCTAGACCCAATAGGGGACACCCAATTTCTCCAAACGAATGTTGTCCCACACATCATCCAATAAGTGAAGATATAGACGAGGGTCATTCCATATTGAACTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR type disease resistance protein | NBS-LRR type disease resistance protein [Ipomoea batatas]. | GGVGKTTKILLGVAGKCIQNESHLTKAVYDDSFIEHYFKLQDEIIKTVGLTIYEENEEQRAAILHNHLVRNNVLVLDDKLGVPLMVKGCKLILTTQSLDVCSVGQYSFGGRIGCQNLFKVNVLDEEEAWNLFKEIFLQDGHTVLTHTIGKHAKELTKKCGGLPLALNMLVSYKPKVNDDRIWRNAIKNFQNASLQMEDLENNVFEILKFSYDRLTDPSLKIELLKLACNPRPNRGHPISPNECCPTHHPISEDIDEGHSILN |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 1-169 | SSF52540 | GGVGKTTKILLGVAGKCIQNESHLTKAVYDDSFIEHYFKLQDEIIKTVGLTIYEENEEQRAAILHNHLVRNNVLVLDDKLGVPLMVKGCKLILTTQSLDVCSVGQYSFGGRIGCQNLFKVNVLDEEEAWNLFKEIFLQDGHTVLTHTIGKHAKELTKKCGGLPLALNML |
| HMMPfam: PF00931 IPR002182
|
1-230 | NB-ARC,NBS NB-ARC
|
GGVGKTTKILLGVAGKCIQNESHLTKAVYDDSFIEHYFKLQDEIIKTVGLTIYEENEEQRAAILHNHLVRNNVLVLDDKLGVPLMVKGCKLILTTQSLDVCSVGQYSFGGRIGCQNLFKVNVLDEEEAWNLFKEIFLQDGHTVLTHTIGKHAKELTKKCGGLPLALNMLVSYKPKVNDDRIWRNAIKNFQNASLQMEDLENNVFEILKFSYDRLTDPSLKIELLKLACNP |
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