PRGDB00048567 (AT4g14050)
| AT4g14050 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 7268064 (AL161537) |
| Gene Class | Unknown |
| Domain Type | LRR, LRR, Ser-Thr Kinase, Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGACTGAGAAGTGGAGGAACAACACTGATTGCTGTTCCTGGGATGGTGTCTCTTGTGATCCCAAGACGGGAGTGGTGGTTGAGTTAGACCTCCAGTATAGTCATCTCAATGGTCCTTTGAGATCTAATAGTAGCCTGTTTAGACTACAACATCTTCAGAAGCTAGTTCTTGGCAGCAATCATCTTTCGGGTATTCTACCGGATTCCATAGGCAATCTCAAACGTTTGAAGGTTTTGGTTCTTGTTAATTGCAATCTTTTTGGAAAGATTCCTTCTTCACTCGGAAATCTTTCTTATCTCACTCATCTTGATCTTTCCTATAATGATTTCACCAGTGAAGGACCAGATTCAATGGGGAACCTTAACCGACTAACCGATATGCTTCTCAAGTTGAGCTCGGTCACCTGGATCGACCTTGGTGATAACCAGTTGAAAGGTATGCTCCCATCTAACATGAGTAGCCTCTCCAAACTGGAGGCTTTTGATATTAGTGGAAATTCATTTTCTGGAACCATTCCCTCTTCTCTCTTCATGATCCCTTCGTTGATTCTACTTCACCTGGGAAGAAACGACTTCAGCGGTCCTTTTGAGATTGGGAATATCTCTTCACCATCTAATCTTCAACTATTAAACATTGGAAGAAACAATTTCAATCCGGACATTGTTGATTTGAGTATTTTCTCACCTCTCTTGTCACTTGGTTATTTGGATGTTTCAGGGATTAATTTGAAGATCAGTTCAACCGTCAGTCTTCCCTCACCCATAGAATACTTGGGTCTATTGTCGTGCAATATTTCCGAGTTTCCCAAATTTCTACGTAACCAAACCAGTTTGGAGTATTTAGACATCTCTGCCAATCAAATTGAAGGCCAAGTACCGGAGTGGTTATGGAGTCTGCCAGAGTTGCGGTATGTTAACATTTCTCATAATTCTTTCAATGGTTTCGAAGGACCAGCAGATGTTATTCAAGGAGGTCGAGAATTACTTGTGCTTGACATAAGTTCAAACATATTCCAGGATCCATTTCCTTTGTTACCAGTAGTCTCTATGAATTACTTGTTCAGCTCCAATAATCGATTCTCGGGAGAGATTCCTAAAACAATATGCGAATTGGATAATCTTCGGATACTTGTTTTGTCAAACAACAACTTCAGCGGTTCTATTCCTCGGTGTTTTGAGAATTTACATCTTTATGTCTTGCACCTTCGGAATAACAACCTCTCTGGTATTTTTCCAGAGGAAGCTATCAGTCATCACTTGCAATCATTTGATGTTGGTCACAATCTTTTCTCAGGAGAACTTCCCAAATCATTGATCAACTGCAGTGATATCGAGTTTCTAAACGTGGAAGATAACAGAATCAATGACACGTTTCCATCCTGGTTGGAATTGTTGCCCAATCTTCAGATTCTTGTCCTTCGTTCTAACGAGTTCTATGGGCCAATATTTTCTCCTGGAGATTCTTTAAGTTTCTCCAGGTTGCGAATCTTTGATATTTCGGAAAATCGCTTCACTGGAGTTTTGCCGTCAGATTACTTTGTTGGTTGGAGTGTAATGTCATCAGTCGTGGACATTGATGGTAGAATAATTCAGTATACAGTTACAGGAATTGACCGGGACTTCTACCATAAGTCTGTAGCTCTCATAAACAAAGGATTAAAGATGGAGCTGGTTGGGAGTGGTTTCACAATCTACAAAACCATCGATGTCTCGGGAAACAGACTCGAAGGAGACATCCCCGAGTCCATCGGTCTTCTCAAAGAAGTGATTGTGCTCAGCATGTCAAACAACGCTTTCACAGGCCATATTCCACCATCTCTATCAAACTTGAGCAATCTCCAATCATTGGATCTTTCTCAAAACAGATTATCCGGCAGTATCCCAGGAGAGCTCGGAAAACTCACGTTTCTAGAGTGGATGAACTTCTCGCACAACAGGCTTGAAGGTCCAATACCAGAAACCACTCAGATTCAAACCCAAGATAGTTCTTCTTTCACAGAGAATCCCGGGCTTTGCGGTGCTCCTCTCCTAAAAAAATGTGGTGGAGAAGAAGAAGCAACAAAGCAAGAACAAGATGAAGACAAGGAAGAGGAAGATCAAGTATTTAGCTGGATAGCAGCTGCAATAGGCTACGTACCTGGTGTTGTGTGTGGACTCACCATCGGCCACATTCTGGTTTCACACAAACGTGACTGGTTCATGAGAATTGTTTCCTTCTTTACTTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| putative disease resistance protein | putative disease resistance protein [Arabidopsis thaliana]. | MTEKWRNNTDCCSWDGVSCDPKTGVVVELDLQYSHLNGPLRSNSSLFRLQHLQKLVLGSNHLSGILPDSIGNLKRLKVLVLVNCNLFGKIPSSLGNLSYLTHLDLSYNDFTSEGPDSMGNLNRLTDMLLKLSSVTWIDLGDNQLKGMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMIPSLILLHLGRNDFSGPFEIGNISSPSNLQLLNIGRNNFNPDIVDLSIFSPLLSLGYLDVSGINLKISSTVSLPSPIEYLGLLSCNISEFPKFLRNQTSLEYLDISANQIEGQVPEWLWSLPELRYVNISHNSFNGFEGPADVIQGGRELLVLDISSNIFQDPFPLLPVVSMNYLFSSNNRFSGEIPKTICELDNLRILVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFPEEAISHHLQSFDVGHNLFSGELPKSLINCSDIEFLNVEDNRINDTFPSWLELLPNLQILVLRSNEFYGPIFSPGDSLSFSRLRIFDISENRFTGVLPSDYFVGWSVMSSVVDIDGRIIQYTVTGIDRDFYHKSVALINKGLKMELVGSGFTIYKTIDVSGNRLEGDIPESIGLLKEVIVLSMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGKLTFLEWMNFSHNRLEGPIPETTQIQTQDSSSFTENPGLCGAPLLKKCGGEEEATKQEQDEDKEEEDQVFSWIAAAIGYVPGVVCGLTIGHILVSHKRDWFMRIVSFFT |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 2-734 | PTHR24420,FAMILY NOT NAMED | TEKWRNNTDCCSWDGVSCDPKTGVVVELDLQYSHLNGPLRSNSSLFRLQHLQKLVLGSNHLSGILPDSIGNLKRLKVLVLVNCNLFGKIPSSLGNLSYLTHLDLSYNDFTSEGPDSMGNLNRLTDMLLKLSSVTWIDLGDNQLKGMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMIPSLILLHLGRNDFSGPFEIGNISSPSNLQLLNIGRNNFNPDIVDLSIFSPLLSLGYLDVSGINLKISSTVSLPSPIEYLGLLSCNISEFPKFLRNQTSLEYLDISANQIEGQVPEWLWSLPELRYVNISHNSFNGFEGPADVIQGGRELLVLDISSNIFQDPFPLLPVVSMNYLFSSNNRFSGEIPKTICELDNLRILVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFPEEAISHHLQSFDVGHNLFSGELPKSLINCSDIEFLNVEDNRINDTFPSWLELLPNLQILVLRSNEFYGPIFSPGDSLSFSRLRIFDISENRFTGVLPSDYFVGWSVMSSVVDIDGRIIQYTVTGIDRDFYHKSVALINKGLKMELVGSGFTIYKTIDVSGNRLEGDIPESIGLLKEVIVLSMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGKLTFLEWMNFSHNRLEGPIPETTQIQTQDSSSFTENPGLCGAPLLKKCGGEEEATKQEQDEDKEEEDQVFSWIAAAIGYVPGVVCGLTIGHILVSHKRDWFM |
| HMMPanther: PTHR24420:SF911 | 2-734 | PTHR24420:SF911 | TEKWRNNTDCCSWDGVSCDPKTGVVVELDLQYSHLNGPLRSNSSLFRLQHLQKLVLGSNHLSGILPDSIGNLKRLKVLVLVNCNLFGKIPSSLGNLSYLTHLDLSYNDFTSEGPDSMGNLNRLTDMLLKLSSVTWIDLGDNQLKGMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMIPSLILLHLGRNDFSGPFEIGNISSPSNLQLLNIGRNNFNPDIVDLSIFSPLLSLGYLDVSGINLKISSTVSLPSPIEYLGLLSCNISEFPKFLRNQTSLEYLDISANQIEGQVPEWLWSLPELRYVNISHNSFNGFEGPADVIQGGRELLVLDISSNIFQDPFPLLPVVSMNYLFSSNNRFSGEIPKTICELDNLRILVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFPEEAISHHLQSFDVGHNLFSGELPKSLINCSDIEFLNVEDNRINDTFPSWLELLPNLQILVLRSNEFYGPIFSPGDSLSFSRLRIFDISENRFTGVLPSDYFVGWSVMSSVVDIDGRIIQYTVTGIDRDFYHKSVALINKGLKMELVGSGFTIYKTIDVSGNRLEGDIPESIGLLKEVIVLSMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGKLTFLEWMNFSHNRLEGPIPETTQIQTQDSSSFTENPGLCGAPLLKKCGGEEEATKQEQDEDKEEEDQVFSWIAAAIGYVPGVVCGLTIGHILVSHKRDWFM |
| HMMPfam: PF08263 IPR013210
|
2-20 | LRRNT_2 Leucine-rich repeat-containing N-terminal, type 2
|
TEKWRNNTDCCSWDGVSCD |
| Gene3D: G3DSA:3.80.10.10 | 5-243 | G3DSA:3.80.10.10 | WRNNTDCCSWDGVSCDPKTGVVVELDLQYSHLNGPLRSNSSLFRLQHLQKLVLGSNHLSGILPDSIGNLKRLKVLVLVNCNLFGKIPSSLGNLSYLTHLDLSYNDFTSEGPDSMGNLNRLTDMLLKLSSVTWIDLGDNQLKGMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMIPSLILLHLGRNDFSGPFEIGNISSPSNLQLLNIGRNNFNPDIVDLSIFSPLLSLGYLDVSGINL |
| superfamily: SSF52047 | 28-340 | SSF52047,LRR | ELDLQYSHLNGPLRSNSSLFRLQHLQKLVLGSNHLSGILPDSIGNLKRLKVLVLVNCNLFGKIPSSLGNLSYLTHLDLSYNDFTSEGPDSMGNLNRLTDMLLKLSSVTWIDLGDNQLKGMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMIPSLILLHLGRNDFSGPFEIGNISSPSNLQLLNIGRNNFNPDIVDLSIFSPLLSLGYLDVSGINLKISSTVSLPSPIEYLGLLSCNISEFPKFLRNQTSLEYLDISANQIEGQVPEWLWSLPELRYVNISHNSFNGFEGPADVIQGGRELLVLDISSNIFQD |
| ProfileScan: PS51450 IPR001611
|
51-74 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
HLQKLVLGSNHLSGILPDSIGNLK |
| HMMPfam: PF13516 | 98-120 | LRR_6,Leucine Rich repeat | SYLTHLDLSYNDFTSEGPDSMGN |
| ProfileScan: PS51450 IPR001611
|
99-120 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
YLTHLDLSYNDFTSEGPDSMGN |
| ProfileScan: PS51450 IPR001611
|
157-179 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
KLEAFDISGNSFSGTIPSSLFMI |
| HMMPfam: PF00560 IPR001611
|
157-177 | LRR_1 Leucine-rich repeat
|
KLEAFDISGNSFSGTIPSSLF |
| ProfileScan: PS51450 IPR001611
|
206-228 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLQLLNIGRNNFNPDIVDLSIFS |
| Gene3D: G3DSA:3.80.10.10 | 255-414 | G3DSA:3.80.10.10 | IEYLGLLSCNISEFPKFLRNQTSLEYLDISANQIEGQVPEWLWSLPELRYVNISHNSFNGFEGPADVIQGGRELLVLDISSNIFQDPFPLLPVVSMNYLFSSNNRFSGEIPKTICELDNLRILVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFPEE |
| HMMPfam: PF13855 | 257-311 | LRR_8,Leucine rich repeat | YLGLLSCNISEFPKFLRNQTSLEYLDISANQIEGQVPEWLWSLPELRYVNISHNS |
| ProfileScan: PS51450 IPR001611
|
277-300 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLEYLDISANQIEGQVPEWLWSLP |
| FPrintScan: PR00019 | 278-291 | LEURICHRPT,Leucine-rich repeat signature | LEYLDISANQIEGQ |
| ProfileScan: PS51450 IPR001611
|
301-322 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
ELRYVNISHNSFNGFEGPADVI |
| ProfileScan: PS51450 IPR001611
|
327-348 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
ELLVLDISSNIFQDPFPLLPVV |
| superfamily: SSF52058 | 329-412 | SSF52058,LRR | LVLDISSNIFQDPFPLLPVVSMNYLFSSNNRFSGEIPKTICELDNLRILVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFP |
| HMMPfam: PF00560 IPR001611
|
373-395 | LRR_1 Leucine-rich repeat
|
NLRILVLSNNNFSGSIPRCFENL |
| ProfileScan: PS51450 IPR001611
|
373-395 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLRILVLSNNNFSGSIPRCFENL |
| ProfileScan: PS51450 IPR001611
|
396-417 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
HLYVLHLRNNNLSGIFPEEAIS |
| superfamily: SSF52058 | 418-680 | SSF52058,LRR | HHLQSFDVGHNLFSGELPKSLINCSDIEFLNVEDNRINDTFPSWLELLPNLQILVLRSNEFYGPIFSPGDSLSFSRLRIFDISENRFTGVLPSDYFVGWSVMSSVVDIDGRIIQYTVTGIDRDFYHKSVALINKGLKMELVGSGFTIYKTIDVSGNRLEGDIPESIGLLKEVIVLSMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGKLTFLEWMNFSHNRLEGPIPETTQIQTQDSSSFTENPGLCGAPLLKKC |
| Gene3D: G3DSA:3.80.10.10 | 418-520 | G3DSA:3.80.10.10 | HHLQSFDVGHNLFSGELPKSLINCSDIEFLNVEDNRINDTFPSWLELLPNLQILVLRSNEFYGPIFSPGDSLSFSRLRIFDISENRFTGVLPSDYFVGWSVMS |
| ProfileScan: PS51450 IPR001611
|
443-465 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
DIEFLNVEDNRINDTFPSWLELL |
| ProfileScan: PS51450 IPR001611
|
564-586 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
IYKTIDVSGNRLEGDIPESIGLL |
| Gene3D: G3DSA:3.80.10.10 | 568-677 | G3DSA:3.80.10.10 | IDVSGNRLEGDIPESIGLLKEVIVLSMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGKLTFLEWMNFSHNRLEGPIPETTQIQTQDSSSFTENPGLCGAPLL |
| HMMPfam: PF12799 | 591-624 | LRR_4,Leucine Rich repeats (2 copies) | VLSMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLS |
| FPrintScan: PR00019 | 610-623 | LEURICHRPT,Leucine-rich repeat signature | LSNLQSLDLSQNRL |
| ProfileScan: PS51450 IPR001611
|
612-635 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLQSLDLSQNRLSGSIPGELGKLT |
List of Contributions
There has not been any contribution yet.
