PRGDB00048575 (F18A5.300)
| F18A5.300 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 5748493 (AL035528) |
| Gene Class | Unknown |
| Domain Type | LRR, LRR, Ser-Thr Kinase, Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGATAACAGTAAAATGGAGCTTGTGTTTAATCTTCTGCCTTTCAAACTCAATACTTGTTTTTGCTAAACACTTGTGTCTTCCAGACCAGAGGGATTCTCTTTGGGGGTTCAAGAACGAATTCCATGTCCCAAGCGAGAAGTGGAGGAACAACACTGATTGCTGTTCTTGGGATGGTGTTTCTTGTGATCCTAAGACGGGCAATGTCGTTGGGTTAGATCTAGCGGGCAGTGATCTCAATGGCCCTTTGAGATCTAATAGCAGCCTGTTTAGACTACAACATCTTCAGAAGCTGTATCTTGGTTGTAATACTTCATTCGGAAGTCTTTCTTATAATGATGGTTTGAAGGGTGGTGAGCTACTGGATTCCATCGGCAACCTCAAATATTTGAAGGTTTTGAGTCTTCGTGGTTGCAATCTCTTTGGAAAGATTCCTTCTTCACTCGGAAATCTTTCTTATCTCACTCATCTTGATCTTTCTTTTAATGATTTCACCGGTGTGATACCAGATTCGATGGGCAATCTCAACTATTTGAGGGTTTTGAATCTTGGTAAATGCAATTTCTATGGAAAGGTTCCTTCTTCACTCGGAAATCTTTCTTATCTCGCTCAACTTGATCTTTCCTATAATGATTTCACCCGTGAAGGACCAGATTCAATGGGGAACCTTAACCGACTAACCGATATGCTTCTCAAGTTGAACTCGCTCACCGATATCGACCTTGGTTCTAACCAGTTGAAAGGTATGCTCCCATCTAACATGAGTAGCCTCTCCAAACTGGAGTATTTTTATATTGGTGGAAATTCATTTTCTGGATCCATTCCCTCTTCTCTCTTCATGATCCCTTCGTTGGTTGAACTTGACCTGCAAAGAAACCACTTCAGCGCTCTTGAGATTGGGAATATCTCTTCACAATCTAAACTTCAAGTATTAATTCTTGGAGGAAATAATTTCAATCCGGACATTGTTGATTTGAGTATTTTCTCACCTCTCTTGTCACTTGGTTATTTGGATGTTTCAGGGATTAATTTGAAGATCAGTTCAACCGTCAGTCTTCCCTCACCCATAGAATACTTGGTTTTATCGTCGTGTAATATTTCCGAGTTTCCCAAATTTCTACGTAACCAAACCAAGTTGTATTCTTTAGACATCTCTGCCAATCAAATTGAAGGCCAAGTACCGGAGTGGTTATGGAGTCTGCCAGAGTTGCAGTCTATTAACATCTCTCATAATTCTTTCAATGGTTTCGAAGGACCAGCAGATGTTATTCAAGGAGGTGGAGAACTATATATGCTTGACATAAGTTCAAACATATTCCAGGATCCATTTCCTTTGTTACCAGTAGACTCTATGAATTTCTTGTTCAGCTCCAATAATCGATTTTCGGGAGAGATTCCTAAAACAATATGCGAATTGGATAATCTTGTGATGCTTGTTTTGTCAAACAACAACTTCAGCGGTTCTATTCCTCGGTGTTTTGAGAATTTACATCTTTATGTCTTGCATCTTCGGAATAACAACCTCTCTGGTATTTTTCCAGAGGAAGCTATCAGTGATCGCTTGCAATCACTTGATGTTGGTCACAATCTTTTCTCAGGAGAACTTCCCAAATCATTGATCAACTGCAGTGCACTCGAGTTTCTATACGTGGAAGATAACCGAATCAGTGACACGTTTCCATCCTGGTTGGAATTGTTGCCCAATTTTCAGATTCTTGTCCTTCGTTCTAACGAGTTCTATGGGCCAATATTTTCTCCTGGAGATTCTTTGAGTTTCCCCAGGTTGCGAATCTTTGATATTTCGGAAAATCGCTTCACTGGAGTCTTGCCATCAGATTACTTTGCGCCTTGGAGTGCAATGTCGTCAGTCGTGGATAGAATAATTCAGCATTTTTTCCAGGGATACTATCATAACTCTGTGGTTCTGACGAACAAAGGATTAAATATGGAGCTGGTTGGGAGTGGTTTCACAATCTACAAAACCATTGATGTCTCCGGAAACAGACTCGAAGGAGACATCCCCGAGTCCATCAGTCTTCTCAAGGAACTGATTGTGCTCAACATGTCAAACAACGCTTTCACAGGCCATATTCCACCATCTCTATCAAACTTGAGCAATCTCCAATCATTGGATCTATCTCAAAACAGATTATCCGGCAGTATCCCAGGAGAGCTCGGGGAACTCACATTTCTAGCGCGGATGAACTTCTCTTACAACAGGCTTGAAGGTCCAATACCACAAACCACTCAGATTCAAACCCAGGATAGTTCTTCTTTCACAGAGAATCCTGGACTCTGTGGTCTTCCTCTAAAAAAAAACTGCGGCGGAAAAGAAGAAGCAACAAAGCAAGAGCAAGATGAGGAAAAGGAAGAAGAAGAACAAGTATTTAGCTGGATCGCAGCTGCAATAGGCTACGTACCTGGTGTTGTGTGTGGACTCACCATCGGCCACATTCTGGTTTCACACAAACGTGACTGGTTCATGAGAATTGTTTCCCTCTTTACTTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| putative disease resistance protein | putative disease resistance protein [Arabidopsis thaliana]. | MITVKWSLCLIFCLSNSILVFAKHLCLPDQRDSLWGFKNEFHVPSEKWRNNTDCCSWDGVSCDPKTGNVVGLDLAGSDLNGPLRSNSSLFRLQHLQKLYLGCNTSFGSLSYNDGLKGGELLDSIGNLKYLKVLSLRGCNLFGKIPSSLGNLSYLTHLDLSFNDFTGVIPDSMGNLNYLRVLNLGKCNFYGKVPSSLGNLSYLAQLDLSYNDFTREGPDSMGNLNRLTDMLLKLNSLTDIDLGSNQLKGMLPSNMSSLSKLEYFYIGGNSFSGSIPSSLFMIPSLVELDLQRNHFSALEIGNISSQSKLQVLILGGNNFNPDIVDLSIFSPLLSLGYLDVSGINLKISSTVSLPSPIEYLVLSSCNISEFPKFLRNQTKLYSLDISANQIEGQVPEWLWSLPELQSINISHNSFNGFEGPADVIQGGGELYMLDISSNIFQDPFPLLPVDSMNFLFSSNNRFSGEIPKTICELDNLVMLVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFPEEAISDRLQSLDVGHNLFSGELPKSLINCSALEFLYVEDNRISDTFPSWLELLPNFQILVLRSNEFYGPIFSPGDSLSFPRLRIFDISENRFTGVLPSDYFAPWSAMSSVVDRIIQHFFQGYYHNSVVLTNKGLNMELVGSGFTIYKTIDVSGNRLEGDIPESISLLKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNRLEGPIPQTTQIQTQDSSSFTENPGLCGLPLKKNCGGKEEATKQEQDEEKEEEEQVFSWIAAAIGYVPGVVCGLTIGHILVSHKRDWFMRIVSLFT |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF911 | 1-828 | PTHR24420:SF911 | MITVKWSLCLIFCLSNSILVFAKHLCLPDQRDSLWGFKNEFHVPSEKWRNNTDCCSWDGVSCDPKTGNVVGLDLAGSDLNGPLRSNSSLFRLQHLQKLYLGCNTSFGSLSYNDGLKGGELLDSIGNLKYLKVLSLRGCNLFGKIPSSLGNLSYLTHLDLSFNDFTGVIPDSMGNLNYLRVLNLGKCNFYGKVPSSLGNLSYLAQLDLSYNDFTREGPDSMGNLNRLTDMLLKLNSLTDIDLGSNQLKGMLPSNMSSLSKLEYFYIGGNSFSGSIPSSLFMIPSLVELDLQRNHFSALEIGNISSQSKLQVLILGGNNFNPDIVDLSIFSPLLSLGYLDVSGINLKISSTVSLPSPIEYLVLSSCNISEFPKFLRNQTKLYSLDISANQIEGQVPEWLWSLPELQSINISHNSFNGFEGPADVIQGGGELYMLDISSNIFQDPFPLLPVDSMNFLFSSNNRFSGEIPKTICELDNLVMLVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFPEEAISDRLQSLDVGHNLFSGELPKSLINCSALEFLYVEDNRISDTFPSWLELLPNFQILVLRSNEFYGPIFSPGDSLSFPRLRIFDISENRFTGVLPSDYFAPWSAMSSVVDRIIQHFFQGYYHNSVVLTNKGLNMELVGSGFTIYKTIDVSGNRLEGDIPESISLLKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNRLEGPIPQTTQIQTQDSSSFTENPGLCGLPLKKNCGGKEEATKQEQDEEKEEEEQVFSWIAAAIGYVPGVVCGLTIGHILVSHKRDWFM |
| HMMPanther: PTHR24420 | 1-828 | PTHR24420,FAMILY NOT NAMED | MITVKWSLCLIFCLSNSILVFAKHLCLPDQRDSLWGFKNEFHVPSEKWRNNTDCCSWDGVSCDPKTGNVVGLDLAGSDLNGPLRSNSSLFRLQHLQKLYLGCNTSFGSLSYNDGLKGGELLDSIGNLKYLKVLSLRGCNLFGKIPSSLGNLSYLTHLDLSFNDFTGVIPDSMGNLNYLRVLNLGKCNFYGKVPSSLGNLSYLAQLDLSYNDFTREGPDSMGNLNRLTDMLLKLNSLTDIDLGSNQLKGMLPSNMSSLSKLEYFYIGGNSFSGSIPSSLFMIPSLVELDLQRNHFSALEIGNISSQSKLQVLILGGNNFNPDIVDLSIFSPLLSLGYLDVSGINLKISSTVSLPSPIEYLVLSSCNISEFPKFLRNQTKLYSLDISANQIEGQVPEWLWSLPELQSINISHNSFNGFEGPADVIQGGGELYMLDISSNIFQDPFPLLPVDSMNFLFSSNNRFSGEIPKTICELDNLVMLVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFPEEAISDRLQSLDVGHNLFSGELPKSLINCSALEFLYVEDNRISDTFPSWLELLPNFQILVLRSNEFYGPIFSPGDSLSFPRLRIFDISENRFTGVLPSDYFAPWSAMSSVVDRIIQHFFQGYYHNSVVLTNKGLNMELVGSGFTIYKTIDVSGNRLEGDIPESISLLKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNRLEGPIPQTTQIQTQDSSSFTENPGLCGLPLKKNCGGKEEATKQEQDEEKEEEEQVFSWIAAAIGYVPGVVCGLTIGHILVSHKRDWFM |
| Gene3D: G3DSA:3.80.10.10 | 26-233 | G3DSA:3.80.10.10 | CLPDQRDSLWGFKNEFHVPSEKWRNNTDCCSWDGVSCDPKTGNVVGLDLAGSDLNGPLRSNSSLFRLQHLQKLYLGCNTSFGSLSYNDGLKGGELLDSIGNLKYLKVLSLRGCNLFGKIPSSLGNLSYLTHLDLSFNDFTGVIPDSMGNLNYLRVLNLGKCNFYGKVPSSLGNLSYLAQLDLSYNDFTREGPDSMGNLNRLTDMLLKL |
| HMMPfam: PF08263 IPR013210
|
28-63 | LRRNT_2 Leucine-rich repeat-containing N-terminal, type 2
|
PDQRDSLWGFKNEFHVPSEKWRNNTDCCSWDGVSCD |
| superfamily: SSF52047 | 71-414 | SSF52047,LRR | GLDLAGSDLNGPLRSNSSLFRLQHLQKLYLGCNTSFGSLSYNDGLKGGELLDSIGNLKYLKVLSLRGCNLFGKIPSSLGNLSYLTHLDLSFNDFTGVIPDSMGNLNYLRVLNLGKCNFYGKVPSSLGNLSYLAQLDLSYNDFTREGPDSMGNLNRLTDMLLKLNSLTDIDLGSNQLKGMLPSNMSSLSKLEYFYIGGNSFSGSIPSSLFMIPSLVELDLQRNHFSALEIGNISSQSKLQVLILGGNNFNPDIVDLSIFSPLLSLGYLDVSGINLKISSTVSLPSPIEYLVLSSCNISEFPKFLRNQTKLYSLDISANQIEGQVPEWLWSLPELQSINISHNSFN |
| ProfileScan: PS51450 IPR001611
|
94-116 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
HLQKLYLGCNTSFGSLSYNDGLK |
| HMMPfam: PF13855 | 129-187 | LRR_8,Leucine rich repeat | YLKVLSLRGCNLFGKIPSSLGNLSYLTHLDLSFNDFTGVIPDSMGNLNYLRVLNLGKCN |
| ProfileScan: PS51450 IPR001611
|
153-175 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
YLTHLDLSFNDFTGVIPDSMGNL |
| FPrintScan: PR00019 | 154-167 | LEURICHRPT,Leucine-rich repeat signature | LTHLDLSFNDFTGV |
| HMMPfam: PF13516 | 202-222 | LRR_6,Leucine Rich repeat | LAQLDLSYNDFTREGPDSMGN |
| Gene3D: G3DSA:3.80.10.10 | 234-345 | G3DSA:3.80.10.10 | NSLTDIDLGSNQLKGMLPSNMSSLSKLEYFYIGGNSFSGSIPSSLFMIPSLVELDLQRNHFSALEIGNISSQSKLQVLILGGNNFNPDIVDLSIFSPLLSLGYLDVSGINLK |
| HMMPfam: PF13855 | 235-294 | LRR_8,Leucine rich repeat | SLTDIDLGSNQLKGMLPSNMSSLSKLEYFYIGGNSFSGSIPSSLFMIPSLVELDLQRNHF |
| ProfileScan: PS51450 IPR001611
|
235-256 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLTDIDLGSNQLKGMLPSNMSS |
| ProfileScan: PS51450 IPR001611
|
283-306 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLVELDLQRNHFSALEIGNISSQS |
| ProfileScan: PS51450 IPR001611
|
307-329 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
KLQVLILGGNNFNPDIVDLSIFS |
| ProfileScan: PS51450 IPR001611
|
355-376 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
PIEYLVLSSCNISEFPKFLRNQ |
| HMMPfam: PF13855 | 356-412 | LRR_8,Leucine rich repeat | IEYLVLSSCNISEFPKFLRNQTKLYSLDISANQIEGQVPEWLWSLPELQSINISHNS |
| Gene3D: G3DSA:3.80.10.10 | 356-515 | G3DSA:3.80.10.10 | IEYLVLSSCNISEFPKFLRNQTKLYSLDISANQIEGQVPEWLWSLPELQSINISHNSFNGFEGPADVIQGGGELYMLDISSNIFQDPFPLLPVDSMNFLFSSNNRFSGEIPKTICELDNLVMLVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFPEE |
| ProfileScan: PS51450 IPR001611
|
378-401 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
KLYSLDISANQIEGQVPEWLWSLP |
| ProfileScan: PS51450 IPR001611
|
402-423 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
ELQSINISHNSFNGFEGPADVI |
| superfamily: SSF52058 | 430-513 | SSF52058,LRR | YMLDISSNIFQDPFPLLPVDSMNFLFSSNNRFSGEIPKTICELDNLVMLVLSNNNFSGSIPRCFENLHLYVLHLRNNNLSGIFP |
| HMMPfam: PF00560 IPR001611
|
474-496 | LRR_1 Leucine-rich repeat
|
NLVMLVLSNNNFSGSIPRCFENL |
| ProfileScan: PS51450 IPR001611
|
474-496 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLVMLVLSNNNFSGSIPRCFENL |
| ProfileScan: PS51450 IPR001611
|
497-518 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
HLYVLHLRNNNLSGIFPEEAIS |
| Gene3D: G3DSA:3.80.10.10 | 520-622 | G3DSA:3.80.10.10 | RLQSLDVGHNLFSGELPKSLINCSALEFLYVEDNRISDTFPSWLELLPNFQILVLRSNEFYGPIFSPGDSLSFPRLRIFDISENRFTGVLPSDYFAPWSAMSS |
| ProfileScan: PS51450 IPR001611
|
520-543 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
RLQSLDVGHNLFSGELPKSLINCS |
| superfamily: SSF52058 | 520-774 | SSF52058,LRR | RLQSLDVGHNLFSGELPKSLINCSALEFLYVEDNRISDTFPSWLELLPNFQILVLRSNEFYGPIFSPGDSLSFPRLRIFDISENRFTGVLPSDYFAPWSAMSSVVDRIIQHFFQGYYHNSVVLTNKGLNMELVGSGFTIYKTIDVSGNRLEGDIPESISLLKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNRLEGPIPQTTQIQTQDSSSFTENPGLCGLPLKKNC |
| ProfileScan: PS51450 IPR001611
|
544-566 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
ALEFLYVEDNRISDTFPSWLELL |
| ProfileScan: PS51450 IPR001611
|
658-680 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
IYKTIDVSGNRLEGDIPESISLL |
| HMMPfam: PF13855 | 660-717 | LRR_8,Leucine rich repeat | KTIDVSGNRLEGDIPESISLLKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRL |
| Gene3D: G3DSA:3.80.10.10 | 662-771 | G3DSA:3.80.10.10 | IDVSGNRLEGDIPESISLLKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNRLEGPIPQTTQIQTQDSSSFTENPGLCGLPLK |
| ProfileScan: PS51450 IPR001611
|
682-705 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
ELIVLNMSNNAFTGHIPPSLSNLS |
| FPrintScan: PR00019 | 704-717 | LEURICHRPT,Leucine-rich repeat signature | LSNLQSLDLSQNRL |
| ProfileScan: PS51450 IPR001611
|
706-728 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLQSLDLSQNRLSGSIPGELGEL |
List of Contributions
There has not been any contribution yet.
