PRGDB00048576 (F18A5.300)
| F18A5.300 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 5748493 (AL035528) |
| Gene Class | Unknown |
| Domain Type | LRR, LRR, Ser-Thr Kinase, Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
ATGAAGTGTGAAAAGGCAACAGAGACGTGGAGGAACAAGACTGATTGCTGTTCTTGGAATCGTGTCTCTTGTGATCCTAAGACAGGCAAGGTCGTCGAGTTAGATCTCATGAGCAGTTGTCTCAATGGCCCTTTGAGATCTAATAGTAGCCTGTTTAGACTACAACATCTCCAGAGCTTAGAACTTAGCTCCAATAATATTTCCGGTATCCTACCAGATTCCATCGGCAACCTCAAATATTTGAGGTCTTTAAGTTTTCGTACTTGCCATCTCTTTGGAAAGATTCCATCTTCACTCGGAAGTCTTTCTTATCTCACTCATCTTGATCTTTCTTATAACGATTTCACCAGTGAAGGACCAGATTCGGGTGGCAACCTAAACCGACTTACAGATTTGCAACTTGTGCTACTCAACTTGAGCTCGGTCACCTGGATCGACCTTGGTTCTAACCAGTTGAAAGGAAGGGGCATTGTTGATTTCAGCATCTTCTTGCATCTCAAGTCACTTTGTTCACTTGACCTCTCCTATCTGAATACAAGAAGCATGGTTGATTTGAGTTTTTTTTCACATCTCATGTCACTTGATGAGCTGGATCTTTCAGGGATTAATTTGAAGATCAGTTCAACTCTCAGCTTTCCCTCAGCCACGGGCACCTTGATTTTAGCATCCTGCAATATTGTTGAGTTCCCCAAGTTTCTAGAAAACCAAACCAGTTTGTTTTATCTAGACATCTCTGCAAATCACATTGAAGGCCAAGTACCGGAGTGGTTGTGGAGACTGCCAACGTTGTCGTTTGTAAACATTGCTCAGAATTCCTTCAGTGGAGAACTACCTATGTTACCAAACTCTATCTATAGCTTTATAGCCTCTGATAATCAGTTTTCGGGAGAGATTCCTAGAACAGTATGCGAATTGGTTAGTCTTAATACACTTGTTTTATCTAACAACAAATTCAGCGGTTCTATTCCCCGGTGTTTTGAGAATTTCAAAACTATTTCAATCTTGCATCTTCGGAATAACAGCCTCTCGGGTGTTTTTCCAAAGGAAATTATCAGTGAAACCTTGACATCACTTGATGTTGGTCACAATTGGCTATCAGGACAACTTCCCAAGTCTCTGATCAAATGCACTGACCTCGAGTTTCTGAACGTGGAAGATAACAGAATCAATGACAAATTTCCATTTTGGTTGAGATCGTTGTCCAATCTACAGATTCTTGTCCTTCGTTCTAATGAGTTCTATGGGCCAATATTTTCTCTTGAAGATTCTTTGAGTTTCCCCAAGTTGCGAATCTTTGATATTTCGGAAAATCACTTCACTGGAGTCTTGCCATCAGATTACTTTGCAGGTTGGAGTGCAATGTCATCAGTCGTAGACATTTTTGATACTACGCCTCAGGTTCACATTTTAGGAGTTTTCCAGGGATACTATCATAACTCTGTGGTTCTGACGAACAAAGGATTAAATATGGAGCTGGTTGGGAGTGGTTTCACAATCTACAAAACCATTGATGTCTCCGGAAACAGACTCGAAGGAGATATTCCAGAATCGATTGGTATACTCAAGGAACTGATTGTGCTCAACATGTCAAACAACGCTTTCACAGGCCATATTCCACCATCTCTATCAAACTTGAGCAATCTCCAATCATTGGATCTATCTCAAAACAGATTATCCGGCAGTATCCCGCCAGAGCTCGGGAAACTTACGTTTCTGGAGTGGATGAACTTCTCGTACAACAGGCTTGAAGGTCCAATACCACAAGCCACTCAGATTCAAAGCCAGAATAGTTCTTCTTTCGCAGAGAATCCCGGGCTTTGCGGTGCTCCTTTCCTAAACAAATGTGGTGGAGAAGAAGAAGAAGAAGAAGAAGCAACAAAGCAAGAAGAAGATGAAGATGAAGAAAAGGAAGAGAAAAATCAAGTATTTAGCTGGATAGCAGCTGCAATAGGATATGTACCTGGTGTGTTCTGTGGACTCACCATCGCCCACATTCTCACTTCATAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| putative disease resistance protein | putative disease resistance protein [Arabidopsis thaliana]. | MKCEKATETWRNKTDCCSWNRVSCDPKTGKVVELDLMSSCLNGPLRSNSSLFRLQHLQSLELSSNNISGILPDSIGNLKYLRSLSFRTCHLFGKIPSSLGSLSYLTHLDLSYNDFTSEGPDSGGNLNRLTDLQLVLLNLSSVTWIDLGSNQLKGRGIVDFSIFLHLKSLCSLDLSYLNTRSMVDLSFFSHLMSLDELDLSGINLKISSTLSFPSATGTLILASCNIVEFPKFLENQTSLFYLDISANHIEGQVPEWLWRLPTLSFVNIAQNSFSGELPMLPNSIYSFIASDNQFSGEIPRTVCELVSLNTLVLSNNKFSGSIPRCFENFKTISILHLRNNSLSGVFPKEIISETLTSLDVGHNWLSGQLPKSLIKCTDLEFLNVEDNRINDKFPFWLRSLSNLQILVLRSNEFYGPIFSLEDSLSFPKLRIFDISENHFTGVLPSDYFAGWSAMSSVVDIFDTTPQVHILGVFQGYYHNSVVLTNKGLNMELVGSGFTIYKTIDVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPPELGKLTFLEWMNFSYNRLEGPIPQATQIQSQNSSSFAENPGLCGAPFLNKCGGEEEEEEEATKQEEDEDEEKEEKNQVFSWIAAAIGYVPGVFCGLTIAHILTS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Gene3D: G3DSA:3.80.10.10 | 6-135 | G3DSA:3.80.10.10 | ATETWRNKTDCCSWNRVSCDPKTGKVVELDLMSSCLNGPLRSNSSLFRLQHLQSLELSSNNISGILPDSIGNLKYLRSLSFRTCHLFGKIPSSLGSLSYLTHLDLSYNDFTSEGPDSGGNLNRLTDLQLV |
| HMMPanther: PTHR24420 | 10-666 | PTHR24420,FAMILY NOT NAMED | WRNKTDCCSWNRVSCDPKTGKVVELDLMSSCLNGPLRSNSSLFRLQHLQSLELSSNNISGILPDSIGNLKYLRSLSFRTCHLFGKIPSSLGSLSYLTHLDLSYNDFTSEGPDSGGNLNRLTDLQLVLLNLSSVTWIDLGSNQLKGRGIVDFSIFLHLKSLCSLDLSYLNTRSMVDLSFFSHLMSLDELDLSGINLKISSTLSFPSATGTLILASCNIVEFPKFLENQTSLFYLDISANHIEGQVPEWLWRLPTLSFVNIAQNSFSGELPMLPNSIYSFIASDNQFSGEIPRTVCELVSLNTLVLSNNKFSGSIPRCFENFKTISILHLRNNSLSGVFPKEIISETLTSLDVGHNWLSGQLPKSLIKCTDLEFLNVEDNRINDKFPFWLRSLSNLQILVLRSNEFYGPIFSLEDSLSFPKLRIFDISENHFTGVLPSDYFAGWSAMSSVVDIFDTTPQVHILGVFQGYYHNSVVLTNKGLNMELVGSGFTIYKTIDVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPPELGKLTFLEWMNFSYNRLEGPIPQATQIQSQNSSSFAENPGLCGAPFLNKCGGEEEEEEEATKQEEDEDEEKEEKNQVFSWIAAAIGYVPGVFCGLTIAHIL |
| HMMPanther: PTHR24420:SF913 | 10-666 | PTHR24420:SF913 | WRNKTDCCSWNRVSCDPKTGKVVELDLMSSCLNGPLRSNSSLFRLQHLQSLELSSNNISGILPDSIGNLKYLRSLSFRTCHLFGKIPSSLGSLSYLTHLDLSYNDFTSEGPDSGGNLNRLTDLQLVLLNLSSVTWIDLGSNQLKGRGIVDFSIFLHLKSLCSLDLSYLNTRSMVDLSFFSHLMSLDELDLSGINLKISSTLSFPSATGTLILASCNIVEFPKFLENQTSLFYLDISANHIEGQVPEWLWRLPTLSFVNIAQNSFSGELPMLPNSIYSFIASDNQFSGEIPRTVCELVSLNTLVLSNNKFSGSIPRCFENFKTISILHLRNNSLSGVFPKEIISETLTSLDVGHNWLSGQLPKSLIKCTDLEFLNVEDNRINDKFPFWLRSLSNLQILVLRSNEFYGPIFSLEDSLSFPKLRIFDISENHFTGVLPSDYFAGWSAMSSVVDIFDTTPQVHILGVFQGYYHNSVVLTNKGLNMELVGSGFTIYKTIDVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPPELGKLTFLEWMNFSYNRLEGPIPQATQIQSQNSSSFAENPGLCGAPFLNKCGGEEEEEEEATKQEEDEDEEKEEKNQVFSWIAAAIGYVPGVFCGLTIAHIL |
| superfamily: SSF52047 | 28-274 | SSF52047,LRR | TGKVVELDLMSSCLNGPLRSNSSLFRLQHLQSLELSSNNISGILPDSIGNLKYLRSLSFRTCHLFGKIPSSLGSLSYLTHLDLSYNDFTSEGPDSGGNLNRLTDLQLVLLNLSSVTWIDLGSNQLKGRGIVDFSIFLHLKSLCSLDLSYLNTRSMVDLSFFSHLMSLDELDLSGINLKISSTLSFPSATGTLILASCNIVEFPKFLENQTSLFYLDISANHIEGQVPEWLWRLPTLSFVNIAQNSFS |
| ProfileScan: PS51450 IPR001611
|
56-79 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
HLQSLELSSNNISGILPDSIGNLK |
| HMMPfam: PF00560 IPR001611
|
56-78 | LRR_1 Leucine-rich repeat
|
HLQSLELSSNNISGILPDSIGNL |
| FPrintScan: PR00019 | 57-70 | LEURICHRPT,Leucine-rich repeat signature | LQSLELSSNNISGI |
| HMMPfam: PF13516 | 103-120 | LRR_6,Leucine Rich repeat | SYLTHLDLSYNDFTSEGP |
| ProfileScan: PS51450 IPR001611
|
104-125 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
YLTHLDLSYNDFTSEGPDSGGN |
| Gene3D: G3DSA:3.80.10.10 | 137-350 | G3DSA:3.80.10.10 | LNLSSVTWIDLGSNQLKGRGIVDFSIFLHLKSLCSLDLSYLNTRSMVDLSFFSHLMSLDELDLSGINLKISSTLSFPSATGTLILASCNIVEFPKFLENQTSLFYLDISANHIEGQVPEWLWRLPTLSFVNIAQNSFSGELPMLPNSIYSFIASDNQFSGEIPRTVCELVSLNTLVLSNNKFSGSIPRCFENFKTISILHLRNNSLSGVFPKEI |
| ProfileScan: PS51450 IPR001611
|
168-189 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLCSLDLSYLNTRSMVDLSFFS |
| ProfileScan: PS51450 IPR001611
|
193-214 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLDELDLSGINLKISSTLSFPS |
| HMMPfam: PF13855 | 218-272 | LRR_8,Leucine rich repeat | TLILASCNIVEFPKFLENQTSLFYLDISANHIEGQVPEWLWRLPTLSFVNIAQNS |
| ProfileScan: PS51450 IPR001611
|
238-261 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLFYLDISANHIEGQVPEWLWRLP |
| superfamily: SSF52058 | 280-603 | SSF52058,LRR | LPNSIYSFIASDNQFSGEIPRTVCELVSLNTLVLSNNKFSGSIPRCFENFKTISILHLRNNSLSGVFPKEIISETLTSLDVGHNWLSGQLPKSLIKCTDLEFLNVEDNRINDKFPFWLRSLSNLQILVLRSNEFYGPIFSLEDSLSFPKLRIFDISENHFTGVLPSDYFAGWSAMSSVVDIFDTTPQVHILGVFQGYYHNSVVLTNKGLNMELVGSGFTIYKTIDVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPPELGKLTFLEWMNFSYNRLEGPIPQATQIQSQNSSSFAEN |
| ProfileScan: PS51450 IPR001611
|
307-329 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLNTLVLSNNKFSGSIPRCFENF |
| HMMPfam: PF00560 IPR001611
|
307-328 | LRR_1 Leucine-rich repeat
|
SLNTLVLSNNKFSGSIPRCFEN |
| ProfileScan: PS51450 IPR001611
|
354-377 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
TLTSLDVGHNWLSGQLPKSLIKCT |
| Gene3D: G3DSA:3.80.10.10 | 354-456 | G3DSA:3.80.10.10 | TLTSLDVGHNWLSGQLPKSLIKCTDLEFLNVEDNRINDKFPFWLRSLSNLQILVLRSNEFYGPIFSLEDSLSFPKLRIFDISENHFTGVLPSDYFAGWSAMSS |
| ProfileScan: PS51450 IPR001611
|
378-399 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
DLEFLNVEDNRINDKFPFWLRS |
| HMMPfam: PF00560 IPR001611
|
428-450 | LRR_1 Leucine-rich repeat
|
KLRIFDISENHFTGVLPSDYFAG |
| HMMPfam: PF13855 | 501-558 | LRR_8,Leucine rich repeat | KTIDVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRL |
| Gene3D: G3DSA:3.80.10.10 | 503-610 | G3DSA:3.80.10.10 | IDVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPPELGKLTFLEWMNFSYNRLEGPIPQATQIQSQNSSSFAENPGLCGAP |
| ProfileScan: PS51450 IPR001611
|
523-546 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
ELIVLNMSNNAFTGHIPPSLSNLS |
| FPrintScan: PR00019 | 545-558 | LEURICHRPT,Leucine-rich repeat signature | LSNLQSLDLSQNRL |
| ProfileScan: PS51450 IPR001611
|
547-570 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLQSLDLSQNRLSGSIPPELGKLT |
List of Contributions
There has not been any contribution yet.
