PRGDB00048638 (NBS-LRR type disease resistance protein, putative, expressed)
| NBS-LRR type disease resistance protein, putative, expressed | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 108863896 (DP000010) |
| Gene Class | NL |
| Domain Type | LRR, NBS, LRR, Others |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
ATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTACAGCTTTGGGAGATGAAGCCACCAGGGCTGTCATAGCCAAACTCTCCGGAAAAGTATCTAACTTGAGGGAACTTCCTGACAAAGTTGAGTATATCAGAAGGGAATTGCGTCTCATGAAAGATGTAATACAAGATTTAGATTCCACAAATACCAACATGAATGTTGTCAAGGGTTGGATCGACGAACTGCGGAAGCTGGCTTACCGTGTTGAAGACATAATGGACAAGTACTCATACTATGCTTGTCAACGGCAGCAAGAAGGATCAGTGATGAGATGCGTAAGAGGAGCACATTATGCAGGTGTTTTCAGTGAAGTTGCTAGTGAGGTAATGAAGATAAAGGGTGATGTTGAACAGGTTAAAAGACAGCAAATGGAATGGTTACCTACAGTTCAGCTCATTTCAAGAACACCCACTGACATCGAAACACCGCGATCTCAAGGAAGAAGAAAGTTGCTTGAATGTGGCGATCCTGTGGGGATTGAATACAACAGGAAAAGGTTGCTTGAATTACTGTACCCTGAAGAACCAGGCCACAAAGTGATAACAGTGTCTGGTATGGGTGGACTGGGAAAAACCACCCTGGCCTTAGACGTATTTGAACGTGAAAAGATCAAGTTCCCAGTTCATGCCTGGATCACTGTGTCACAGACTTGCACGATCCTTAGTCTTCTAAGACAGTTAGTCAGTCCGCTCATACCCATGGAACAAGAATCATCAGAATCCAAGGAAGATCTAATCAACAAAATGGGCGTTCATGAATTGACAAAAGAATTAAACAGAAGGACTGAAAACTGTACATCATGTTTGATTGTGCTAGATGATGTCTGGGACCAGAACGTGTACTTCGAAATACAGGGCATGCTTAAGAATCCCCAAGCAAGTCGCATTATCATCACGACACGGATGGAACATGTGGCAGTTCTTGCTCCCTCTGAATGCCATCTCAAGATACAGGCTTTGGGTGAAATTGATGCATTCAACCTTTTCTGCAGAAGGGCATTTTACAACACAAAGGACCATAGGTGCCCGCTGGACCTTGAGAATGTGGCTGCCTCCATAGTAAGTAAGTGTAAGGGGCTGCCCCTAGCACTTGTTACCATGGGTGGCCTGATGTCCACAAAGCTACAAACTGAGCATGCCTGGCAACAAATGTACAACCAGCTTCGGAGTGAGCTGGCCAAAAATGATGATGTCAAGGCAATTCTGAAAGTAAGCTACCATGCATTACCAGCTGACCAAAAGAACTGCTTCTTGTACTGCAGCCTGTTCCCTGAAGATTTTCGCATATCTCGTGAGAGCCTTGTGCGGTACTGGGTTGCAGAAGGTTTTGCGGTGAGAATCGAACACAATAGACCAGAAGATGTGGCCGAAATAAATCTCATGGAACTGATCCACCGGAACATGCTTGAAGTTGACGAGTATGATGAGCTTGGCAAGGTGATCTCTTGTAAGATGCATGACATTGTGCGCAACCTGGCTCTCTCAATTGCTGGACAGGAGAGGTTCGGTTACGCAAATGATTATGGAGCTGTGGAAAAGGTTGATTGGGAAGTCCGTCGTCTGTCATTATTCTTGAACAATGGAAAAGGTTGTGCATCAACAGTGAAATTTCCACATCTTCGCACACTACTTGAAACAACTACACACCCTCCTGGATTGTTATCCTCAATTTTGTCTGAATCCAAATACCTCACTGTCCTAGAGCTACAAGACTCAGATATCACCGAAGTACCAGCATGCATAGGCAAATTGTTTAATTTACGTTACATTGGCTTAAGGCGGACAAGACTCTGCTCACTACCAGAGTCTATTGACAAGCTCTCAAACCTGCAAACTCTGGACATCAAGCAAACTAAAATAGAGAAGCTACCACGTGGAATCACTAAGATCAAGAAGCTGAGGCACCTTCTAGCTGACAGATATGAGGATGAAAATAAGTCAGAGTTCCGGTATTTTATTGGAGTGCAAGCACCCAAATATCTGTCTAAGTTGGAAGAACTTCAGACTCTTGAGACTGTGGAAGCCAGCAAGGACTTGGCCGAGCAGCTGAAGGAACTAATGCAGATAAGAAGTATTTGGATTGACAACATAAGTTCTGCTGATTGTGGAAATATTTTTGCTACACTATCAAATATGCCGCTTCTTTCCAGCTTGCTTCTTTCGGCAAAGGATGAAAATGAGCCACTTTGTTTTGAGGCTCTCCAGCCCATTTCCAATGAACTCCACAGGTTAATTATCAGAGGGCAATGGGCTAAGGGCACACTAGACTACCCGATATTTCATAGCCATGGTACATATCTGAAATATTTAGCTCTAAGTTGGTGTCATCTTGGTGAAGATCCACTGGGGATGCTCGCATCACACTTGTCAAACCTCACTTATCTAAGACTGAACAACATGCACAGTTCGAAAACTTTGGTTCTTGATGCAGAGGCGTTCCCCCACCTGAAGACTCTTGTGTTAATGCACATGCCTGATGTCAACCAGATAAACATCACGGATGGCGCCCTTCCATGCATCGAAGGTTTATACATTGTATCATTGCGGAAGCTGGATAAAGTCCCTCAAGGCATTGAATCCCTTGCCTCCCTAAAGAAGCTCTGTTTGATGGACCTGCACAAAGACTTCAAGACTCAATGGAATGGTGACGTGATGCACCAGAAGATGCTGCATATTGCAGAGATCCATGTAGGGTGGTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR type disease resistance protein, putative, expressed | NBS-LRR type disease resistance protein, putative, expressed [Oryza sativa (japonica cultivar-group)]. | MAEAVLLAISKISTALGDEATRAVIAKLSGKVSNLRELPDKVEYIRRELRLMKDVIQDLDSTNTNMNVVKGWIDELRKLAYRVEDIMDKYSYYACQRQQEGSVMRCVRGAHYAGVFSEVASEVMKIKGDVEQVKRQQMEWLPTVQLISRTPTDIETPRSQGRRKLLECGDPVGIEYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDVFEREKIKFPVHAWITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTENCTSCLIVLDDVWDQNVYFEIQGMLKNPQASRIIITTRMEHVAVLAPSECHLKIQALGEIDAFNLFCRRAFYNTKDHRCPLDLENVAASIVSKCKGLPLALVTMGGLMSTKLQTEHAWQQMYNQLRSELAKNDDVKAILKVSYHALPADQKNCFLYCSLFPEDFRISRESLVRYWVAEGFAVRIEHNRPEDVAEINLMELIHRNMLEVDEYDELGKVISCKMHDIVRNLALSIAGQERFGYANDYGAVEKVDWEVRRLSLFLNNGKGCASTVKFPHLRTLLETTTHPPGLLSSILSESKYLTVLELQDSDITEVPACIGKLFNLRYIGLRRTRLCSLPESIDKLSNLQTLDIKQTKIEKLPRGITKIKKLRHLLADRYEDENKSEFRYFIGVQAPKYLSKLEELQTLETVEASKDLAEQLKELMQIRSIWIDNISSADCGNIFATLSNMPLLSSLLLSAKDENEPLCFEALQPISNELHRLIIRGQWAKGTLDYPIFHSHGTYLKYLALSWCHLGEDPLGMLASHLSNLTYLRLNNMHSSKTLVLDAEAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLMDLHKDFKTQWNGDVMHQKMLHIAEIHVGW |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155:SF197 | 9-909 | PTHR23155:SF197,OS11G0227100 PROTEIN | ISKISTALGDEATRAVIAKLSGKVSNLRELPDKVEYIRRELRLMKDVIQDLDSTNTNMNVVKGWIDELRKLAYRVEDIMDKYSYYACQRQQEGSVMRCVRGAHYAGVFSEVASEVMKIKGDVEQVKRQQMEWLPTVQLISRTPTDIETPRSQGRRKLLECGDPVGIEYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDVFEREKIKFPVHAWITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTENCTSCLIVLDDVWDQNVYFEIQGMLKNPQASRIIITTRMEHVAVLAPSECHLKIQALGEIDAFNLFCRRAFYNTKDHRCPLDLENVAASIVSKCKGLPLALVTMGGLMSTKLQTEHAWQQMYNQLRSELAKNDDVKAILKVSYHALPADQKNCFLYCSLFPEDFRISRESLVRYWVAEGFAVRIEHNRPEDVAEINLMELIHRNMLEVDEYDELGKVISCKMHDIVRNLALSIAGQERFGYANDYGAVEKVDWEVRRLSLFLNNGKGCASTVKFPHLRTLLETTTHPPGLLSSILSESKYLTVLELQDSDITEVPACIGKLFNLRYIGLRRTRLCSLPESIDKLSNLQTLDIKQTKIEKLPRGITKIKKLRHLLADRYEDENKSEFRYFIGVQAPKYLSKLEELQTLETVEASKDLAEQLKELMQIRSIWIDNISSADCGNIFATLSNMPLLSSLLLSAKDENEPLCFEALQPISNELHRLIIRGQWAKGTLDYPIFHSHGTYLKYLALSWCHLGEDPLGMLASHLSNLTYLRLNNMHSSKTLVLDAEAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLMDLHKDFKTQWNGDVMHQKMLHIAEI |
| HMMPanther: PTHR23155 | 9-909 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | ISKISTALGDEATRAVIAKLSGKVSNLRELPDKVEYIRRELRLMKDVIQDLDSTNTNMNVVKGWIDELRKLAYRVEDIMDKYSYYACQRQQEGSVMRCVRGAHYAGVFSEVASEVMKIKGDVEQVKRQQMEWLPTVQLISRTPTDIETPRSQGRRKLLECGDPVGIEYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDVFEREKIKFPVHAWITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTENCTSCLIVLDDVWDQNVYFEIQGMLKNPQASRIIITTRMEHVAVLAPSECHLKIQALGEIDAFNLFCRRAFYNTKDHRCPLDLENVAASIVSKCKGLPLALVTMGGLMSTKLQTEHAWQQMYNQLRSELAKNDDVKAILKVSYHALPADQKNCFLYCSLFPEDFRISRESLVRYWVAEGFAVRIEHNRPEDVAEINLMELIHRNMLEVDEYDELGKVISCKMHDIVRNLALSIAGQERFGYANDYGAVEKVDWEVRRLSLFLNNGKGCASTVKFPHLRTLLETTTHPPGLLSSILSESKYLTVLELQDSDITEVPACIGKLFNLRYIGLRRTRLCSLPESIDKLSNLQTLDIKQTKIEKLPRGITKIKKLRHLLADRYEDENKSEFRYFIGVQAPKYLSKLEELQTLETVEASKDLAEQLKELMQIRSIWIDNISSADCGNIFATLSNMPLLSSLLLSAKDENEPLCFEALQPISNELHRLIIRGQWAKGTLDYPIFHSHGTYLKYLALSWCHLGEDPLGMLASHLSNLTYLRLNNMHSSKTLVLDAEAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLMDLHKDFKTQWNGDVMHQKMLHIAEI |
| superfamily: SSF52540 | 152-409 | SSF52540 | TDIETPRSQGRRKLLECGDPVGIEYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDVFEREKIKFPVHAWITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTENCTSCLIVLDDVWDQNVYFEIQGMLKNPQASRIIITTRMEHVAVLAPSECHLKIQALGEIDAFNLFCRRAFYNTKDHRCPLDLENVAASIVSKCKGLPLALVTMGGLMSTKLQTEHAWQQMYNQLRSELAKN |
| HMMPfam: PF00931 IPR002182
|
175-458 | NB-ARC,NBS NB-ARC
|
EYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDVFEREKIKFPVHAWITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTENCTSCLIVLDDVWDQNVYFEIQGMLKNPQASRIIITTRMEHVAVLAPSECHLKIQALGEIDAFNLFCRRAFYNTKDHRCPLDLENVAASIVSKCKGLPLALVTMGGLMSTKLQTEHAWQQMYNQLRSELAKNDDVKAILKVSYHALPADQKNCFLYCSLFPEDFRISRESLVRYWVAEGFA |
| FPrintScan: PR00364 IPR000767
|
194-209 | DISEASERSIST Disease resistance protein
|
VITVSGMGGLGKTTLA |
| FPrintScan: PR00364 IPR000767
|
276-290 | DISEASERSIST Disease resistance protein
|
TENCTSCLIVLDDVW |
| FPrintScan: PR00364 IPR000767
|
371-385 | DISEASERSIST Disease resistance protein
|
CKGLPLALVTMGGLM |
| superfamily: SSF52058 | 482-905 | SSF52058,LRR | MLEVDEYDELGKVISCKMHDIVRNLALSIAGQERFGYANDYGAVEKVDWEVRRLSLFLNNGKGCASTVKFPHLRTLLETTTHPPGLLSSILSESKYLTVLELQDSDITEVPACIGKLFNLRYIGLRRTRLCSLPESIDKLSNLQTLDIKQTKIEKLPRGITKIKKLRHLLADRYEDENKSEFRYFIGVQAPKYLSKLEELQTLETVEASKDLAEQLKELMQIRSIWIDNISSADCGNIFATLSNMPLLSSLLLSAKDENEPLCFEALQPISNELHRLIIRGQWAKGTLDYPIFHSHGTYLKYLALSWCHLGEDPLGMLASHLSNLTYLRLNNMHSSKTLVLDAEAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLMDLHKDFKTQWNGDVMHQKMLH |
| Gene3D: G3DSA:3.80.10.10 | 550-736 | G3DSA:3.80.10.10 | KFPHLRTLLETTTHPPGLLSSILSESKYLTVLELQDSDITEVPACIGKLFNLRYIGLRRTRLCSLPESIDKLSNLQTLDIKQTKIEKLPRGITKIKKLRHLLADRYEDENKSEFRYFIGVQAPKYLSKLEELQTLETVEASKDLAEQLKELMQIRSIWIDNISSADCGNIFATLSNMPLLSSLLLSA |
| FPrintScan: PR00364 IPR000767
|
619-635 | DISEASERSIST Disease resistance protein
|
DKLSNLQTLDIKQTKIE |
| Gene3D: G3DSA:3.80.10.10 | 779-886 | G3DSA:3.80.10.10 | TYLKYLALSWCHLGEDPLGMLASHLSNLTYLRLNNMHSSKTLVLDAEAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLMDL |
List of References
The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.
BMC Biol.: 2005, 3();20
PubMed:16188032
WorldCat.org
DOI
(I e)
List of Contributions
There has not been any contribution yet.
