PRGDB00048924 (putative NBS-LRR disease resistance protein)
| putative NBS-LRR disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 108946800 (DQ644144) |
| Gene Class | NL |
| Domain Type | NBS, LRR |
| Gene Species | Malus x domestica |
DNA Sequence
CCTTGCTAAGCTTGTTTGTGATAGAATCTTTCATCATTTTGAAGTTCACTGCTTTCTCGGCAACGTTAGAGAGGTTTCTAACGTTGATCTTCAAAAAAGACTTCTTTTCCCGGTGTTGAGGGAAAAGATTGAAGAAATTTGGGATGAAGAGCGCGGAATCATTTTCACTAGGAAGTGCTTGCGCAACAAAAAAGTTCTTCTTGTACTTGATGATGTGGATCACATAAACCAGCTACAAGTACTAGTTGGAAAGGAAGATTGGTTTGGCATGGGAAGTAGAATTATCATTACAACTAGAAATGAACGTCTGCTAGTCCAGCATGACATAACATTATGTCATAATGTCAAAGTGTTAGATAAAGGCGCAGCTCTTGCACTGTTTAGCCTTCATGCCTTTAAGAAAAATCTGCCTGAGGATGGGTTTTGGGAACTGTCAACGTATTTCATTAATTATGCTGGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| putative NBS-LRR disease resistance protein | putative NBS-LRR disease resistance protein [Malus x domestica]. | LAKLVCDRIFHHFEVHCFLGNVREVSNVDLQKRLLFPVLREKIEEIWDEERGIIFTRKCLRNKKVLLVLDDVDHINQLQVLVGKEDWFGMGSRIIITTRNERLLVQHDITLCHNVKVLDKGAALALFSLHAFKKNLPEDGFWELSTYFINYAG |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR11017 | 1-153 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | LAKLVCDRIFHHFEVHCFLGNVREVSNVDLQKRLLFPVLREKIEEIWDEERGIIFTRKCLRNKKVLLVLDDVDHINQLQVLVGKEDWFGMGSRIIITTRNERLLVQHDITLCHNVKVLDKGAALALFSLHAFKKNLPEDGFWELSTYFINYAG |
| superfamily: SSF52540 | 1-137 | SSF52540 | LAKLVCDRIFHHFEVHCFLGNVREVSNVDLQKRLLFPVLREKIEEIWDEERGIIFTRKCLRNKKVLLVLDDVDHINQLQVLVGKEDWFGMGSRIIITTRNERLLVQHDITLCHNVKVLDKGAALALFSLHAFKKNLP |
| HMMPanther: PTHR11017:SF20 | 1-153 | PTHR11017:SF20,SUBFAMILY NOT NAMED | LAKLVCDRIFHHFEVHCFLGNVREVSNVDLQKRLLFPVLREKIEEIWDEERGIIFTRKCLRNKKVLLVLDDVDHINQLQVLVGKEDWFGMGSRIIITTRNERLLVQHDITLCHNVKVLDKGAALALFSLHAFKKNLPEDGFWELSTYFINYAG |
| HMMPfam: PF00931 IPR002182
|
8-136 | NB-ARC,NBS NB-ARC
|
RIFHHFEVHCFLGNVREVSNVDLQKRLLFPVLREKIEEIWDEERGIIFTRKCLRNKKVLLVLDDVDHINQLQVLVGKEDWFGMGSRIIITTRNERLLVQHDITLCHNVKVLDKGAALALFSLHAFKKNL |
List of Contributions
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