PRGDB00048932 (putative NBS-LRR disease resistance protein)

putative NBS-LRR disease resistance protein
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	83571777 (DQ285630)
Gene Class	NL
Domain Type	NBS, LRR, Others
Gene Species	Oryza sativa Indica Group
	Comment?

Oryza sativa (indica cultivar-group) putative nitrate-induced NOI protein (75-1-127BAC12.1), putative NBS-LRR disease resistance protein (Nbs1-Pi9), putative NBS-LRR disease resistance protein (Nbs3-Pi9), and NBS-LRR disease resistance protein (Pi9) genes

DNA Sequence

ATGGCGGAGACGGTGCTGAGCATGGCGAGGTCGCTGGTGGGCAGCGCCATCAGCAAGGCCGCCTCCGCTGCTGCCGACGAGACCAGCCTCCTGCTGGGCGTCGAGAAAGACATCTGGTATATCAAAGATGAGCTAAAAACGATGCAAGCATTCCTTAGAGCTGCTGAACTTATGAAAAAGAAAGATGAACTATTAAAGGTTTGGGCAGAGCAAATACGTGACCTGTCATATGACATTGAAGATTCCCTTGATGAATTTAAGGTCCATATTGAAAGCCAAACCCTATTTCGTCAGTTGGTGAAACTCAGAGAACGCCACCGAATTGCTATCCGTATCCACAACCTTAAATCAAGAGTTGAAGAAGTGAGTAGCAGGAACACACGCTACAGTTTAGTCAAGCCTATTTCCTCTGGCACAGAGATTGACATGGATTCCTATGCAGAAGACATTCGTAATCAGTCAGCTCGCAATGTGGATGAAGCTGAGCTTGTTGGGTTTTCTGACTCCAAGAAAAGGTTGCTTGAAATGATCGATACCAATGCTAATGATGGTCCGGCCAAAGTAATCTGTGTTGTTGGGATGGGTGGTTTAGGCAAGACAGCTCTTTCGAGGAAGATCTTTGAAAGCGAAGAAGACATTAGGAAGAACTTCCCTTGCAATGCTTGGATTACAGTGTCACAATCATTTCACAGGATTGAGCTACTCAAAGATATGATACGCCAACTTCTAGGTCCCAATTCTCTGAAACAACTCTTGCAAGAATTGCAAGGGAAGGTGGTGGTGCAAGTACATCATCTTTCTGAGTACCTGATAGAAGAGCTCAAGGAGAAGAGGTACTTTGTTATTCTAGATGATCTATGGATTTTACATGATTGGAATTGGATAAATGAAATTGCATTTCCTAAGAACAATAAGAAGGGCAGTCGAATAGTAATAACCACTCGGAATGTTGATCTAGCGGAGAAGTGTGCCACAGCCTCACTGGTGTACCACCTTGATTTCTTGCAGATGAACGATGCCATAACATTGCTACTAAGAAAAACAAATAAAAATCATGAAGACATGGAATCAAATAAAAATATGCAAAAGATGGTTGAACGAATTGTAAATAAATGTGGTCGTCTACCATTAGCAATACTTACAATAGGAGCTGTGCTTGCAACTAAACATGTGTCAGAATGGGAGAAATTCTATGAACAGCTTCCTTCAGAACTAGAAATAAACCCAAGCCTGGAAGCTTTGAGGAGAATGGTGACCCTAGGTTACAACCACCTACCATCCCATCTGAAACCATGCTTTTTGTATCTAAGTATCTTTCCTGAGGATTTTGAAATCAAAAGGAATCGTCTGGTAGGTAGATGGATAGCAGAAGGGTTTGTTAGACCGCAGGTTGGGATGACGACTAAGGATGTCGGAGAAAGTTACTTTAATGAGCTAATCAGCCGAAGTATGATTCAACGATCAAGAGTGGGCATATCAGGAAAAATTAAGACTTGTCGAATCCATGATATCATCCGTGATATCACAGTTTCAATCTCGAGACAGGAAAATTTTGTATTGTTACCAATGGGAGATGGCTCTGATTTAGTTCAGGAAAACACTCGCCACATAGCATTCCATGGGAGTATGTCCTGCAAAACAGGATTGGATTGGAGCATTATTCGATCATTAGCTATTTTTGGTGACAGACCCAAGAGTCTAGCACATGCAGTTTGTCTAGATCAATTGAGGATGTTACGGGTCTTGGATCTTGAAGATGTGACATTCTTAATCACTCAAAAAGATTTCGACCGTATTGCATTGTTGTGCCACTTGAAATACTTGAGTATTGGATATTCGTCATCCATATATTCACTTCCCAGATCCATTGGTAAACTACAGGGCCTACAAACTTTGAACATGCTGAGAACATACATTGCAGCACTACCAAGTGAGATCAGTAAACTCCAATGTCTGCATACTCTTCGTTGTAGTAGAAAGTTTGTTTATGACAACTTTAGTCTAAACCACCCAATGAAGTGCATAACTAACACAATATGCCTGCCTAAAGTATTCACACCTTTAGTTAGTCGCGATGATCGTGCAAAACAAATTGCTGAATTGCACATGGCCACCAAAAGTTGCTGGTCTGAATCATTCGGTGTGAAGGTACCCAAAGGAATAGGTAAGTTGCGAGACTTGCAGGTTCTAGAGTATGTAGATATCAGGCGGACCAGTAGTAGAGCAATCAAAGAGCTGGGGCACTTAAGCAAGTTGAGGAAATTAGGTGTGATAACAAAAGGCTCGACAAAGGAAAAATGTAAGATACTTTATGCAGCCATTGAGAAGCTCTCTTCCCTCCAATCTCTCTATGTGAATGCTGCGTTATTATCAGATATTGAAACACTTGAGTGCCTAGATTCTATTTCATCTCCTCCTCCCCTACTGAGGACACTCGGGTTGAATGGAAGTCTTGAAGAGATGCCTAACTGGATTGAGCAGCTCACTCACCTGAAGAAGATCTACTTATTGAGGAGCAAACTAAAGGAAGGTAAAACCATGCTGATACTTGGGGCATTGCCCAACCTCATGGTCCTTTATCTTTATTGGAATGCTTACCTTGGGGAGAAGCTAGTATTCAAAACGGGAGCATTCCCAAATCTTAGAACACTTCGTATTTACGAATTGGATCAGCTAAGAGAGATGAGATTTGAGGATGGCAGCTCACCCCTGTTGGAAAAGATAGAAATCTCTTGCTGCAGGTTGGAATCAGGGATTATTGGTATCATTCACCTTCCAAGGCTCAAGGAGATTTCACTTGAATACAAAAGTAAAGTGGCTAGGCTTGGTCAGCTGGAGGGAGAAGTGAACACACACCCAAATCGCCCCGTGCTGCGAATGGACAGTGACCGAAGGGATCACGACCTGGGGGCTGAAGCCGAAGGATCTTCTATAGAAGTGCAAACAGCAGATCCTGTTCCTGATGCCGAAGGATCAGTCACTGTAGCAGTGGAAGCAACGGATCCCCTTCCCGAGCAGGAGGGAGAGAGCTCGCAGTCGCAGGTGATCACGTTGACGACGAACGATAGCGAAGAGATAGGCACAGCTCAAGCTGGCTGA

Protein sequences

Name	Description	Sequence
putative NBS-LRR disease resistance protein	putative NBS-LRR disease resistance protein [Oryza sativa (indica cultivar-group)].	MAETVLSMARSLVGSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRDHDLGAEAEGSSIEVQTADPVPDAEGSVTVAVEATDPLPEQEGESSQSQVITLTTNDSEEIGTAQAG

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR11017	14-966	PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN	GSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRD
HMMPanther: PTHR11017:SF127	14-966	PTHR11017:SF127,UNCHARACTERIZED	GSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRD
superfamily: SSF52540	151-405	SSF52540	RNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSEL
Gene3D: G3DSA:3.40.50.300	169-322	G3DSA:3.40.50.300	SKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEK
HMMPfam: PF00931 IPR002182	174-462	NB-ARC,NBS NB-ARC	LEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRP
FPrintScan: PR00364 IPR000767	188-203	DISEASERSIST Disease resistance protein	VICVVGMGGLGKTALS
FPrintScan: PR00364 IPR000767	273-287	DISEASERSIST Disease resistance protein	ELKEKRYFVILDDLW
FPrintScan: PR00364 IPR000767	372-386	DISEASERSIST Disease resistance protein	CGRLPLAILTIGAVL
superfamily: SSF52047	551-888	SSF52047,LRR	WSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYE
Gene3D: G3DSA:3.80.10.10	568-662	G3DSA:3.80.10.10	AHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFV
FPrintScan: PR00364 IPR000767	574-590	DISEASERSIST Disease resistance protein	DQLRMLRVLDLEDVTFL
Gene3D: G3DSA:3.80.10.10	697-779	G3DSA:3.80.10.10	QIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSS
Gene3D: G3DSA:3.80.10.10	780-935	G3DSA:3.80.10.10	LQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEY

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Analyses

Blast

Blast matches against Reference R-Genes. Show