PRGDB00048932 (putative NBS-LRR disease resistance protein)
| putative NBS-LRR disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 83571777 (DQ285630) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Oryza sativa Indica Group |
DNA Sequence
ATGGCGGAGACGGTGCTGAGCATGGCGAGGTCGCTGGTGGGCAGCGCCATCAGCAAGGCCGCCTCCGCTGCTGCCGACGAGACCAGCCTCCTGCTGGGCGTCGAGAAAGACATCTGGTATATCAAAGATGAGCTAAAAACGATGCAAGCATTCCTTAGAGCTGCTGAACTTATGAAAAAGAAAGATGAACTATTAAAGGTTTGGGCAGAGCAAATACGTGACCTGTCATATGACATTGAAGATTCCCTTGATGAATTTAAGGTCCATATTGAAAGCCAAACCCTATTTCGTCAGTTGGTGAAACTCAGAGAACGCCACCGAATTGCTATCCGTATCCACAACCTTAAATCAAGAGTTGAAGAAGTGAGTAGCAGGAACACACGCTACAGTTTAGTCAAGCCTATTTCCTCTGGCACAGAGATTGACATGGATTCCTATGCAGAAGACATTCGTAATCAGTCAGCTCGCAATGTGGATGAAGCTGAGCTTGTTGGGTTTTCTGACTCCAAGAAAAGGTTGCTTGAAATGATCGATACCAATGCTAATGATGGTCCGGCCAAAGTAATCTGTGTTGTTGGGATGGGTGGTTTAGGCAAGACAGCTCTTTCGAGGAAGATCTTTGAAAGCGAAGAAGACATTAGGAAGAACTTCCCTTGCAATGCTTGGATTACAGTGTCACAATCATTTCACAGGATTGAGCTACTCAAAGATATGATACGCCAACTTCTAGGTCCCAATTCTCTGAAACAACTCTTGCAAGAATTGCAAGGGAAGGTGGTGGTGCAAGTACATCATCTTTCTGAGTACCTGATAGAAGAGCTCAAGGAGAAGAGGTACTTTGTTATTCTAGATGATCTATGGATTTTACATGATTGGAATTGGATAAATGAAATTGCATTTCCTAAGAACAATAAGAAGGGCAGTCGAATAGTAATAACCACTCGGAATGTTGATCTAGCGGAGAAGTGTGCCACAGCCTCACTGGTGTACCACCTTGATTTCTTGCAGATGAACGATGCCATAACATTGCTACTAAGAAAAACAAATAAAAATCATGAAGACATGGAATCAAATAAAAATATGCAAAAGATGGTTGAACGAATTGTAAATAAATGTGGTCGTCTACCATTAGCAATACTTACAATAGGAGCTGTGCTTGCAACTAAACATGTGTCAGAATGGGAGAAATTCTATGAACAGCTTCCTTCAGAACTAGAAATAAACCCAAGCCTGGAAGCTTTGAGGAGAATGGTGACCCTAGGTTACAACCACCTACCATCCCATCTGAAACCATGCTTTTTGTATCTAAGTATCTTTCCTGAGGATTTTGAAATCAAAAGGAATCGTCTGGTAGGTAGATGGATAGCAGAAGGGTTTGTTAGACCGCAGGTTGGGATGACGACTAAGGATGTCGGAGAAAGTTACTTTAATGAGCTAATCAGCCGAAGTATGATTCAACGATCAAGAGTGGGCATATCAGGAAAAATTAAGACTTGTCGAATCCATGATATCATCCGTGATATCACAGTTTCAATCTCGAGACAGGAAAATTTTGTATTGTTACCAATGGGAGATGGCTCTGATTTAGTTCAGGAAAACACTCGCCACATAGCATTCCATGGGAGTATGTCCTGCAAAACAGGATTGGATTGGAGCATTATTCGATCATTAGCTATTTTTGGTGACAGACCCAAGAGTCTAGCACATGCAGTTTGTCTAGATCAATTGAGGATGTTACGGGTCTTGGATCTTGAAGATGTGACATTCTTAATCACTCAAAAAGATTTCGACCGTATTGCATTGTTGTGCCACTTGAAATACTTGAGTATTGGATATTCGTCATCCATATATTCACTTCCCAGATCCATTGGTAAACTACAGGGCCTACAAACTTTGAACATGCTGAGAACATACATTGCAGCACTACCAAGTGAGATCAGTAAACTCCAATGTCTGCATACTCTTCGTTGTAGTAGAAAGTTTGTTTATGACAACTTTAGTCTAAACCACCCAATGAAGTGCATAACTAACACAATATGCCTGCCTAAAGTATTCACACCTTTAGTTAGTCGCGATGATCGTGCAAAACAAATTGCTGAATTGCACATGGCCACCAAAAGTTGCTGGTCTGAATCATTCGGTGTGAAGGTACCCAAAGGAATAGGTAAGTTGCGAGACTTGCAGGTTCTAGAGTATGTAGATATCAGGCGGACCAGTAGTAGAGCAATCAAAGAGCTGGGGCACTTAAGCAAGTTGAGGAAATTAGGTGTGATAACAAAAGGCTCGACAAAGGAAAAATGTAAGATACTTTATGCAGCCATTGAGAAGCTCTCTTCCCTCCAATCTCTCTATGTGAATGCTGCGTTATTATCAGATATTGAAACACTTGAGTGCCTAGATTCTATTTCATCTCCTCCTCCCCTACTGAGGACACTCGGGTTGAATGGAAGTCTTGAAGAGATGCCTAACTGGATTGAGCAGCTCACTCACCTGAAGAAGATCTACTTATTGAGGAGCAAACTAAAGGAAGGTAAAACCATGCTGATACTTGGGGCATTGCCCAACCTCATGGTCCTTTATCTTTATTGGAATGCTTACCTTGGGGAGAAGCTAGTATTCAAAACGGGAGCATTCCCAAATCTTAGAACACTTCGTATTTACGAATTGGATCAGCTAAGAGAGATGAGATTTGAGGATGGCAGCTCACCCCTGTTGGAAAAGATAGAAATCTCTTGCTGCAGGTTGGAATCAGGGATTATTGGTATCATTCACCTTCCAAGGCTCAAGGAGATTTCACTTGAATACAAAAGTAAAGTGGCTAGGCTTGGTCAGCTGGAGGGAGAAGTGAACACACACCCAAATCGCCCCGTGCTGCGAATGGACAGTGACCGAAGGGATCACGACCTGGGGGCTGAAGCCGAAGGATCTTCTATAGAAGTGCAAACAGCAGATCCTGTTCCTGATGCCGAAGGATCAGTCACTGTAGCAGTGGAAGCAACGGATCCCCTTCCCGAGCAGGAGGGAGAGAGCTCGCAGTCGCAGGTGATCACGTTGACGACGAACGATAGCGAAGAGATAGGCACAGCTCAAGCTGGCTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| putative NBS-LRR disease resistance protein | putative NBS-LRR disease resistance protein [Oryza sativa (indica cultivar-group)]. | MAETVLSMARSLVGSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRDHDLGAEAEGSSIEVQTADPVPDAEGSVTVAVEATDPLPEQEGESSQSQVITLTTNDSEEIGTAQAG |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR11017 | 14-966 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRD |
| HMMPanther: PTHR11017:SF127 | 14-966 | PTHR11017:SF127,UNCHARACTERIZED | GSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRD |
| superfamily: SSF52540 | 151-405 | SSF52540 | RNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSEL |
| Gene3D: G3DSA:3.40.50.300 | 169-322 | G3DSA:3.40.50.300 | SKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEK |
| HMMPfam: PF00931 IPR002182
|
174-462 | NB-ARC,NBS NB-ARC
|
LEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRP |
| FPrintScan: PR00364 IPR000767
|
188-203 | DISEASERSIST Disease resistance protein
|
VICVVGMGGLGKTALS |
| FPrintScan: PR00364 IPR000767
|
273-287 | DISEASERSIST Disease resistance protein
|
ELKEKRYFVILDDLW |
| FPrintScan: PR00364 IPR000767
|
372-386 | DISEASERSIST Disease resistance protein
|
CGRLPLAILTIGAVL |
| superfamily: SSF52047 | 551-888 | SSF52047,LRR | WSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYE |
| Gene3D: G3DSA:3.80.10.10 | 568-662 | G3DSA:3.80.10.10 | AHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFV |
| FPrintScan: PR00364 IPR000767
|
574-590 | DISEASERSIST Disease resistance protein
|
DQLRMLRVLDLEDVTFL |
| Gene3D: G3DSA:3.80.10.10 | 697-779 | G3DSA:3.80.10.10 | QIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSS |
| Gene3D: G3DSA:3.80.10.10 | 780-935 | G3DSA:3.80.10.10 | LQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEY |
List of References
Shaohong Qu, Guifu Liu, Bo Zhou, Maria Bellizzi, Lirong Zeng, Liangying Dai, Bin Han, Guo-Liang Wang
The broad-spectrum blast resistance gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice.
Genetics: 2006, 172(3);1901-14
PubMed:16387888
WorldCat.org
DOI
(P p)
List of Contributions
There has not been any contribution yet.
