PRGDB00048932 (putative NBS-LRR disease resistance protein)

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putative NBS-LRR disease resistance protein
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 83571777 (DQ285630)
Gene Class NL
Domain Type NBS, LRR, Others
Gene Species Oryza sativa Indica Group

Comment?

Oryza sativa (indica cultivar-group) putative nitrate-induced NOI protein (75-1-127BAC12.1), putative NBS-LRR disease resistance protein (Nbs1-Pi9), putative NBS-LRR disease resistance protein (Nbs3-Pi9), and NBS-LRR disease resistance protein (Pi9) genes

DNA Sequence

ATGGCGGAGACGGTGCTGAGCATGGCGAGGTCGCTGGTGGGCAGCGCCATCAGCAAGGCCGCCTCCGCTGCTGCCGACGAGACCAGCCTCCTGCTGGGCGTCGAGAAAGACATCTGGTATATCAAAGATGAGCTAAAAACGATGCAAGCATTCCTTAGAGCTGCTGAACTTATGAAAAAGAAAGATGAACTATTAAAGGTTTGGGCAGAGCAAATACGTGACCTGTCATATGACATTGAAGATTCCCTTGATGAATTTAAGGTCCATATTGAAAGCCAAACCCTATTTCGTCAGTTGGTGAAACTCAGAGAACGCCACCGAATTGCTATCCGTATCCACAACCTTAAATCAAGAGTTGAAGAAGTGAGTAGCAGGAACACACGCTACAGTTTAGTCAAGCCTATTTCCTCTGGCACAGAGATTGACATGGATTCCTATGCAGAAGACATTCGTAATCAGTCAGCTCGCAATGTGGATGAAGCTGAGCTTGTTGGGTTTTCTGACTCCAAGAAAAGGTTGCTTGAAATGATCGATACCAATGCTAATGATGGTCCGGCCAAAGTAATCTGTGTTGTTGGGATGGGTGGTTTAGGCAAGACAGCTCTTTCGAGGAAGATCTTTGAAAGCGAAGAAGACATTAGGAAGAACTTCCCTTGCAATGCTTGGATTACAGTGTCACAATCATTTCACAGGATTGAGCTACTCAAAGATATGATACGCCAACTTCTAGGTCCCAATTCTCTGAAACAACTCTTGCAAGAATTGCAAGGGAAGGTGGTGGTGCAAGTACATCATCTTTCTGAGTACCTGATAGAAGAGCTCAAGGAGAAGAGGTACTTTGTTATTCTAGATGATCTATGGATTTTACATGATTGGAATTGGATAAATGAAATTGCATTTCCTAAGAACAATAAGAAGGGCAGTCGAATAGTAATAACCACTCGGAATGTTGATCTAGCGGAGAAGTGTGCCACAGCCTCACTGGTGTACCACCTTGATTTCTTGCAGATGAACGATGCCATAACATTGCTACTAAGAAAAACAAATAAAAATCATGAAGACATGGAATCAAATAAAAATATGCAAAAGATGGTTGAACGAATTGTAAATAAATGTGGTCGTCTACCATTAGCAATACTTACAATAGGAGCTGTGCTTGCAACTAAACATGTGTCAGAATGGGAGAAATTCTATGAACAGCTTCCTTCAGAACTAGAAATAAACCCAAGCCTGGAAGCTTTGAGGAGAATGGTGACCCTAGGTTACAACCACCTACCATCCCATCTGAAACCATGCTTTTTGTATCTAAGTATCTTTCCTGAGGATTTTGAAATCAAAAGGAATCGTCTGGTAGGTAGATGGATAGCAGAAGGGTTTGTTAGACCGCAGGTTGGGATGACGACTAAGGATGTCGGAGAAAGTTACTTTAATGAGCTAATCAGCCGAAGTATGATTCAACGATCAAGAGTGGGCATATCAGGAAAAATTAAGACTTGTCGAATCCATGATATCATCCGTGATATCACAGTTTCAATCTCGAGACAGGAAAATTTTGTATTGTTACCAATGGGAGATGGCTCTGATTTAGTTCAGGAAAACACTCGCCACATAGCATTCCATGGGAGTATGTCCTGCAAAACAGGATTGGATTGGAGCATTATTCGATCATTAGCTATTTTTGGTGACAGACCCAAGAGTCTAGCACATGCAGTTTGTCTAGATCAATTGAGGATGTTACGGGTCTTGGATCTTGAAGATGTGACATTCTTAATCACTCAAAAAGATTTCGACCGTATTGCATTGTTGTGCCACTTGAAATACTTGAGTATTGGATATTCGTCATCCATATATTCACTTCCCAGATCCATTGGTAAACTACAGGGCCTACAAACTTTGAACATGCTGAGAACATACATTGCAGCACTACCAAGTGAGATCAGTAAACTCCAATGTCTGCATACTCTTCGTTGTAGTAGAAAGTTTGTTTATGACAACTTTAGTCTAAACCACCCAATGAAGTGCATAACTAACACAATATGCCTGCCTAAAGTATTCACACCTTTAGTTAGTCGCGATGATCGTGCAAAACAAATTGCTGAATTGCACATGGCCACCAAAAGTTGCTGGTCTGAATCATTCGGTGTGAAGGTACCCAAAGGAATAGGTAAGTTGCGAGACTTGCAGGTTCTAGAGTATGTAGATATCAGGCGGACCAGTAGTAGAGCAATCAAAGAGCTGGGGCACTTAAGCAAGTTGAGGAAATTAGGTGTGATAACAAAAGGCTCGACAAAGGAAAAATGTAAGATACTTTATGCAGCCATTGAGAAGCTCTCTTCCCTCCAATCTCTCTATGTGAATGCTGCGTTATTATCAGATATTGAAACACTTGAGTGCCTAGATTCTATTTCATCTCCTCCTCCCCTACTGAGGACACTCGGGTTGAATGGAAGTCTTGAAGAGATGCCTAACTGGATTGAGCAGCTCACTCACCTGAAGAAGATCTACTTATTGAGGAGCAAACTAAAGGAAGGTAAAACCATGCTGATACTTGGGGCATTGCCCAACCTCATGGTCCTTTATCTTTATTGGAATGCTTACCTTGGGGAGAAGCTAGTATTCAAAACGGGAGCATTCCCAAATCTTAGAACACTTCGTATTTACGAATTGGATCAGCTAAGAGAGATGAGATTTGAGGATGGCAGCTCACCCCTGTTGGAAAAGATAGAAATCTCTTGCTGCAGGTTGGAATCAGGGATTATTGGTATCATTCACCTTCCAAGGCTCAAGGAGATTTCACTTGAATACAAAAGTAAAGTGGCTAGGCTTGGTCAGCTGGAGGGAGAAGTGAACACACACCCAAATCGCCCCGTGCTGCGAATGGACAGTGACCGAAGGGATCACGACCTGGGGGCTGAAGCCGAAGGATCTTCTATAGAAGTGCAAACAGCAGATCCTGTTCCTGATGCCGAAGGATCAGTCACTGTAGCAGTGGAAGCAACGGATCCCCTTCCCGAGCAGGAGGGAGAGAGCTCGCAGTCGCAGGTGATCACGTTGACGACGAACGATAGCGAAGAGATAGGCACAGCTCAAGCTGGCTGA


Protein sequences

Name Description Sequence
putative NBS-LRR disease resistance protein putative NBS-LRR disease resistance protein [Oryza sativa (indica cultivar-group)].

MAETVLSMARSLVGSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRDHDLGAEAEGSSIEVQTADPVPDAEGSVTVAVEATDPLPEQEGESSQSQVITLTTNDSEEIGTAQAG

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR11017
14-966 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRD

HMMPanther: PTHR11017:SF127
14-966 PTHR11017:SF127,UNCHARACTERIZED

GSAISKAASAAADETSLLLGVEKDIWYIKDELKTMQAFLRAAELMKKKDELLKVWAEQIRDLSYDIEDSLDEFKVHIESQTLFRQLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYSLVKPISSGTEIDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPQVGMTTKDVGESYFNELISRSMIQRSRVGISGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEYKSKVARLGQLEGEVNTHPNRPVLRMDSDRRD

superfamily: SSF52540
151-405 SSF52540

RNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSEL

Gene3D: G3DSA:3.40.50.300
169-322 G3DSA:3.40.50.300

SKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEK

HMMPfam: PF00931
IPR002182
174-462 NB-ARC,NBS
NB-ARC

LEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPNSLKQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVILDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKHVSEWEKFYEQLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRP

FPrintScan: PR00364
IPR000767
188-203 DISEASERSIST
Disease resistance protein

VICVVGMGGLGKTALS

FPrintScan: PR00364
IPR000767
273-287 DISEASERSIST
Disease resistance protein

ELKEKRYFVILDDLW

FPrintScan: PR00364
IPR000767
372-386 DISEASERSIST
Disease resistance protein

CGRLPLAILTIGAVL

superfamily: SSF52047
551-888 SSF52047,LRR

WSIIRSLAIFGDRPKSLAHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFVYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSSLQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYE

Gene3D: G3DSA:3.80.10.10
568-662 G3DSA:3.80.10.10

AHAVCLDQLRMLRVLDLEDVTFLITQKDFDRIALLCHLKYLSIGYSSSIYSLPRSIGKLQGLQTLNMLRTYIAALPSEISKLQCLHTLRCSRKFV

FPrintScan: PR00364
IPR000767
574-590 DISEASERSIST
Disease resistance protein

DQLRMLRVLDLEDVTFL

Gene3D: G3DSA:3.80.10.10
697-779 G3DSA:3.80.10.10

QIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGHLSKLRKLGVITKGSTKEKCKILYAAIEKLSS

Gene3D: G3DSA:3.80.10.10
780-935 G3DSA:3.80.10.10

LQSLYVNAALLSDIETLECLDSISSPPPLLRTLGLNGSLEEMPNWIEQLTHLKKIYLLRSKLKEGKTMLILGALPNLMVLYLYWNAYLGEKLVFKTGAFPNLRTLRIYELDQLREMRFEDGSSPLLEKIEISCCRLESGIIGIIHLPRLKEISLEY


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