PRGDB00048934 (putative NBS-LRR disease resistance protein)
putative NBS-LRR disease resistance protein | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 83571777 (DQ285630) |
Gene Class | NL |
Domain Type | NBS, LRR, Others |
Gene Species | Oryza sativa Indica Group |
DNA Sequence
ATGGCGATGTCGGTGCTGGGCAGCGCCGTCGGGAAGGCCGCCTCCGCCGCCGCCGACGAGGCCACCCTCCTGCTCGGCGTCCAGAAGGAGATCTGGTACATCAAGGACGAGCTGAAAACTATTCAGGCATTCTTAAGAGCTGCTGAAGTAACAAAGAAGAAAGATGACTTGCTAAAGGTATGGGCAGAGCAAGTACGAGATCTGTCATATAACATTGAAGATTGCCTAGACGAATTCAAGGTTCATGTTGAGAGCCAAAGCTTGGCAAAGCAACTAATGAAGCTTGGTGAACGCCATCGAATTGCTGTACAGATTCTCAACTTAAAATCAAGAATTGAAGAAGTGAGCAACAGGAATACACGCTACAGCTTAATCAAGCTCATTTCCTCTATAACCACAGAGGATGAGAGGGATTCCTACCTAGAAGATGCTCGCAATCGATCAGGTAGCAACACTGACGAGTCAGAACTTGTGGGCTTTGCCAAGACTAAAGATGAGTTGCTTAAACTGATAGATGTCAATACTAATGACGGTCCAGCTAAAGTGATATGTGTGGTTGGAATGGGTGGATTAGGCAAGACTACCCTTGCAAGGAAGGCATATGAAAACAAGGAACACATGAAGAACTTCTCGTGTTGTGCTTGGATCACTGTGTCTCAGTCATTTGACAGGAAAGAAATTCTGAAACAAATGATCAGGCAACTTCTGGGTGCTGATTCATTAGACAAACTCTTGAAAGAATTTAGTGAGAAGTTGCTCGTGCAAGTCCAGCATCTCGCTGATCACTTGGTTGAAGGGCTAAAGGAGAAAAGGTACTTTGTTGTCCTTGATGACCTATGGACCATAGATGCATGGAATTGGATTCATGATACTGCTTTTCCGAAGATTAACAACAGAGGTAGTCGCATAATAATAACAACGCGAGATGCTGGCTTAGCTGGAAGGTGTACCTCTGAATCACTTATTTACCACCTTGAACCGTTACATATAGATGATGCTATACACTTGCTACTAGCAAAGACAAACATAAGACTTGAAGACATGGAAAATGATGAGGACTTGGGCAGCATAGTTACAAAATTGGTAAAAAGGTGTGGTTATTTACCGCTGGCTATACTCACAATAGGAGGCATTCTTGCTACTAAGAAGATAATGGAATGGGGAAAATTTTACAGAGAACTTCCTTCAGAGCTTGAGAGCAATCCAAGCCTAGAAGCCATGAGGAGGATGGTGACCCTAAGCTACAATCACTTACCATCTCATCTTAAACCATGCTTTCTTTACCTAAGTATTTTCCCTGAAGATTTTGAAATTCAAAGAGGGCGCCTGGTAGATAGATGGATAGCAGAGGGTTTTGTCAGAGCCACAGATGGGGTGAACATTGAGGATGTTGGAAATAGTCACTTTAATGAGCTTATCAACAGAAGTCTGATTCAGCCCTCAAAAGTTAGTACAGATGGAGTTGTTAAGAGATGTCGAATCCATGATATCATGCGTGATATCATAGTTTCAATTTCTAGAGAGGAAAATTTTGTGCTGTTGACTAGGGAGAAGATCACTGTTGTAGCGGAGGAGAGCATCCGCCATCTAGCATTTCATGGGAGCAAATGCTCAAAGATATGCTTGGAGTGGAACCATCTGCGCTCAGTAACTTTGTTTGGTGACAGACCTGCGGGGCGAACACCTGCACTTTGTTCACCACAATTTAGGATGCTGAGAGTGTTGGATCTGGAAGATGCAAAATTCAAATTCACACAAAATGATATCAGGAATATAGGGTTGTTGCGCCACATGAAATATTTGAATTTTGCAAGAGCCTCAACTATTTATACACTTCCAAGGTCCATAGGAAAATTGCAGTGCTTGCAAATTTTGAACATGAGGGAGGCAAATATCTCAGCACTAACAACTGAGGTGACTAAACTCCAGAATCTCCGTAGCCTCCGATGCAGCAGGAGGTCAGGTTCTGGTTACTTTAGCATAATAGATAATCCCAAGGAATGCTTGATGATCACCATGTGCTTACCGATGGTTTTCTCAACTTCAATAAATTTCAGTGACCGTGTGAAGTTAATTCCTGAGATATGCATGTCATGTTCTACCCGTTGGTCTGATACAAAGGGTGTGAGGGTGCCAAGAGGAATTGACAACCTAAAAGAGTTACAGATTCTAGAAGTCGTGGACATCAACAGAACTAGTAGGAAGGCGATTGAAGAGCTGGGGGAGCTAATTCAGTTAAGAAAATTAAGCGTGACAACAAAAGGCGCCACAAATAAGAAGTATCAGATATTTTGTGCAGCGATTGAGAAGCTCTCTTCTCTGCAATCTCTCCGTGTGGATGCTGAGGGATTCTCAGATACTGGAACACTTGAGTGGCTCAATTCGATTGCATGTCCTCCTCCATTCTTGAAGACACTCAAGTTGAATGGATCTCTTGCAGATACACCAAACTGGTTTGGGAACCTTAAGCAGCTGGTGAAGATGTGCTTATCCAGATGTGTGCTACAAGATGGTAAAACTATGGAGATACTTGGGGCACTGCCCAACCTTATGGTTCTTCGTCTTTATCGCAACGCATATGCTGACGAGAAAATGGCATTCAGAAGGGGAACATTCCCAAATCTCAGGTGTCTTGATATTTACTTGCTGAAGCAACTTAGAGAGATAAGATTTGAGGAGGGCACCTCGCCAACAATGGAAAGTATAGAAATTTATGGTTGCAGGTTGGAATCAGGGATTATTGGTATCAAGCACCTTCCAAGACTTAAGATTATTTCGCTTGAATATGATGGTAAAGTCGCGAAGCTTGATGTGCTGCAAGAGGAAGTGAATACACACCCCAATCATACTGAACTGCAAATGGCAGAGGATCGAAGTCATCATGACCTAGGAGATTGTGACCATACATTTTCTTTTACTACATCTTTGCACCCCAAAGCGAAGATACTTTGCCGCCTGCTGATGCTATCTCTAATATCGAATTCTATGCGGATTCCCGTGCAAATAGCACCTCCACGTGGCGCGGCCAGATTCACGGATTCGCTCCCACGCACAGCCGTCCGATTGCATTTCAACGCCTCTCTATCCCCTGCGCCTCCACATGTCGCGGCTACGCGGGCATCTCGTTGGATCTATCATCGGCGGCGAGGAGGCGTGGCGATGGTGCCGAGGTTCATCGGCCGGTGGAGGAACATCGTCGACTTGAGGACCGTGCCCAGGTTCCGCATGGTCCCCAACTACTGCCACCCCGTGGGAGCCGCCGAGGGGGGCAACAACTATGGCTTTCAGATGATAGTTTGA
Protein sequences
Name | Description | Sequence |
---|---|---|
putative NBS-LRR disease resistance protein | putative NBS-LRR disease resistance protein [Oryza sativa (indica cultivar-group)]. | MAMSVLGSAVGKAASAAADEATLLLGVQKEIWYIKDELKTIQAFLRAAEVTKKKDDLLKVWAEQVRDLSYNIEDCLDEFKVHVESQSLAKQLMKLGERHRIAVQILNLKSRIEEVSNRNTRYSLIKLISSITTEDERDSYLEDARNRSGSNTDESELVGFAKTKDELLKLIDVNTNDGPAKVICVVGMGGLGKTTLARKAYENKEHMKNFSCCAWITVSQSFDRKEILKQMIRQLLGADSLDKLLKEFSEKLLVQVQHLADHLVEGLKEKRYFVVLDDLWTIDAWNWIHDTAFPKINNRGSRIIITTRDAGLAGRCTSESLIYHLEPLHIDDAIHLLLAKTNIRLEDMENDEDLGSIVTKLVKRCGYLPLAILTIGGILATKKIMEWGKFYRELPSELESNPSLEAMRRMVTLSYNHLPSHLKPCFLYLSIFPEDFEIQRGRLVDRWIAEGFVRATDGVNIEDVGNSHFNELINRSLIQPSKVSTDGVVKRCRIHDIMRDIIVSISREENFVLLTREKITVVAEESIRHLAFHGSKCSKICLEWNHLRSVTLFGDRPAGRTPALCSPQFRMLRVLDLEDAKFKFTQNDIRNIGLLRHMKYLNFARASTIYTLPRSIGKLQCLQILNMREANISALTTEVTKLQNLRSLRCSRRSGSGYFSIIDNPKECLMITMCLPMVFSTSINFSDRVKLIPEICMSCSTRWSDTKGVRVPRGIDNLKELQILEVVDINRTSRKAIEELGELIQLRKLSVTTKGATNKKYQIFCAAIEKLSSLQSLRVDAEGFSDTGTLEWLNSIACPPPFLKTLKLNGSLADTPNWFGNLKQLVKMCLSRCVLQDGKTMEILGALPNLMVLRLYRNAYADEKMAFRRGTFPNLRCLDIYLLKQLREIRFEEGTSPTMESIEIYGCRLESGIIGIKHLPRLKIISLEYDGKVAKLDVLQEEVNTHPNHTELQMAEDRSHHDLGDCDHTFSFTTSLHPKAKILCRLLMLSLISNSMRIPVQIAPPRGAARFTDSLPRTAVRLHFNASLSPAPPHVAATRASRWIYHRRRGGVAMVPRFIGRWRNIVDLRTVPRFRMVPNYCHPVGAAEGGNNYGFQMIV |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR11017 | 8-964 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | SAVGKAASAAADEATLLLGVQKEIWYIKDELKTIQAFLRAAEVTKKKDDLLKVWAEQVRDLSYNIEDCLDEFKVHVESQSLAKQLMKLGERHRIAVQILNLKSRIEEVSNRNTRYSLIKLISSITTEDERDSYLEDARNRSGSNTDESELVGFAKTKDELLKLIDVNTNDGPAKVICVVGMGGLGKTTLARKAYENKEHMKNFSCCAWITVSQSFDRKEILKQMIRQLLGADSLDKLLKEFSEKLLVQVQHLADHLVEGLKEKRYFVVLDDLWTIDAWNWIHDTAFPKINNRGSRIIITTRDAGLAGRCTSESLIYHLEPLHIDDAIHLLLAKTNIRLEDMENDEDLGSIVTKLVKRCGYLPLAILTIGGILATKKIMEWGKFYRELPSELESNPSLEAMRRMVTLSYNHLPSHLKPCFLYLSIFPEDFEIQRGRLVDRWIAEGFVRATDGVNIEDVGNSHFNELINRSLIQPSKVSTDGVVKRCRIHDIMRDIIVSISREENFVLLTREKITVVAEESIRHLAFHGSKCSKICLEWNHLRSVTLFGDRPAGRTPALCSPQFRMLRVLDLEDAKFKFTQNDIRNIGLLRHMKYLNFARASTIYTLPRSIGKLQCLQILNMREANISALTTEVTKLQNLRSLRCSRRSGSGYFSIIDNPKECLMITMCLPMVFSTSINFSDRVKLIPEICMSCSTRWSDTKGVRVPRGIDNLKELQILEVVDINRTSRKAIEELGELIQLRKLSVTTKGATNKKYQIFCAAIEKLSSLQSLRVDAEGFSDTGTLEWLNSIACPPPFLKTLKLNGSLADTPNWFGNLKQLVKMCLSRCVLQDGKTMEILGALPNLMVLRLYRNAYADEKMAFRRGTFPNLRCLDIYLLKQLREIRFEEGTSPTMESIEIYGCRLESGIIGIKHLPRLKIISLEYDGKVAKLDVLQEEVNTHPNHTELQMAEDRSHHDLG |
HMMPanther: PTHR11017:SF129 | 8-964 | PTHR11017:SF129 | SAVGKAASAAADEATLLLGVQKEIWYIKDELKTIQAFLRAAEVTKKKDDLLKVWAEQVRDLSYNIEDCLDEFKVHVESQSLAKQLMKLGERHRIAVQILNLKSRIEEVSNRNTRYSLIKLISSITTEDERDSYLEDARNRSGSNTDESELVGFAKTKDELLKLIDVNTNDGPAKVICVVGMGGLGKTTLARKAYENKEHMKNFSCCAWITVSQSFDRKEILKQMIRQLLGADSLDKLLKEFSEKLLVQVQHLADHLVEGLKEKRYFVVLDDLWTIDAWNWIHDTAFPKINNRGSRIIITTRDAGLAGRCTSESLIYHLEPLHIDDAIHLLLAKTNIRLEDMENDEDLGSIVTKLVKRCGYLPLAILTIGGILATKKIMEWGKFYRELPSELESNPSLEAMRRMVTLSYNHLPSHLKPCFLYLSIFPEDFEIQRGRLVDRWIAEGFVRATDGVNIEDVGNSHFNELINRSLIQPSKVSTDGVVKRCRIHDIMRDIIVSISREENFVLLTREKITVVAEESIRHLAFHGSKCSKICLEWNHLRSVTLFGDRPAGRTPALCSPQFRMLRVLDLEDAKFKFTQNDIRNIGLLRHMKYLNFARASTIYTLPRSIGKLQCLQILNMREANISALTTEVTKLQNLRSLRCSRRSGSGYFSIIDNPKECLMITMCLPMVFSTSINFSDRVKLIPEICMSCSTRWSDTKGVRVPRGIDNLKELQILEVVDINRTSRKAIEELGELIQLRKLSVTTKGATNKKYQIFCAAIEKLSSLQSLRVDAEGFSDTGTLEWLNSIACPPPFLKTLKLNGSLADTPNWFGNLKQLVKMCLSRCVLQDGKTMEILGALPNLMVLRLYRNAYADEKMAFRRGTFPNLRCLDIYLLKQLREIRFEEGTSPTMESIEIYGCRLESGIIGIKHLPRLKIISLEYDGKVAKLDVLQEEVNTHPNHTELQMAEDRSHHDLG |
superfamily: SSF52540 | 140-401 | SSF52540 | YLEDARNRSGSNTDESELVGFAKTKDELLKLIDVNTNDGPAKVICVVGMGGLGKTTLARKAYENKEHMKNFSCCAWITVSQSFDRKEILKQMIRQLLGADSLDKLLKEFSEKLLVQVQHLADHLVEGLKEKRYFVVLDDLWTIDAWNWIHDTAFPKINNRGSRIIITTRDAGLAGRCTSESLIYHLEPLHIDDAIHLLLAKTNIRLEDMENDEDLGSIVTKLVKRCGYLPLAILTIGGILATKKIMEWGKFYRELPSELESN |
Gene3D: G3DSA:3.40.50.300 | 151-312 | G3DSA:3.40.50.300 | NTDESELVGFAKTKDELLKLIDVNTNDGPAKVICVVGMGGLGKTTLARKAYENKEHMKNFSCCAWITVSQSFDRKEILKQMIRQLLGADSLDKLLKEFSEKLLVQVQHLADHLVEGLKEKRYFVVLDDLWTIDAWNWIHDTAFPKINNRGSRIIITTRDAGL |
HMMPfam: PF00931 IPR002182
|
178-457 | NB-ARC,NBS NB-ARC
|
GPAKVICVVGMGGLGKTTLARKAYENKEHMKNFSCCAWITVSQSFDRKEILKQMIRQLLGADSLDKLLKEFSEKLLVQVQHLADHLVEGLKEKRYFVVLDDLWTIDAWNWIHDTAFPKINNRGSRIIITTRDAGLAGRCTSESLIYHLEPLHIDDAIHLLLAKTNIRLEDMENDEDLGSIVTKLVKRCGYLPLAILTIGGILATKKIMEWGKFYRELPSELESNPSLEAMRRMVTLSYNHLPSHLKPCFLYLSIFPEDFEIQRGRLVDRWIAEGFVRATD |
FPrintScan: PR00364 IPR000767
|
182-197 | DISEASERSIST Disease resistance protein
|
VICVVGMGGLGKTTLA |
FPrintScan: PR00364 IPR000767
|
266-280 | DISEASERSIST Disease resistance protein
|
GLKEKRYFVVLDDLW |
FPrintScan: PR00364 IPR000767
|
365-379 | DISEASERSIST Disease resistance protein
|
CGYLPLAILTIGGIL |
superfamily: SSF52058 | 493-929 | SSF52058,LRR | RIHDIMRDIIVSISREENFVLLTREKITVVAEESIRHLAFHGSKCSKICLEWNHLRSVTLFGDRPAGRTPALCSPQFRMLRVLDLEDAKFKFTQNDIRNIGLLRHMKYLNFARASTIYTLPRSIGKLQCLQILNMREANISALTTEVTKLQNLRSLRCSRRSGSGYFSIIDNPKECLMITMCLPMVFSTSINFSDRVKLIPEICMSCSTRWSDTKGVRVPRGIDNLKELQILEVVDINRTSRKAIEELGELIQLRKLSVTTKGATNKKYQIFCAAIEKLSSLQSLRVDAEGFSDTGTLEWLNSIACPPPFLKTLKLNGSLADTPNWFGNLKQLVKMCLSRCVLQDGKTMEILGALPNLMVLRLYRNAYADEKMAFRRGTFPNLRCLDIYLLKQLREIRFEEGTSPTMESIEIYGCRLESGIIGIKHLPRLKIISLEY |
Gene3D: G3DSA:3.80.10.10 | 545-655 | G3DSA:3.80.10.10 | NHLRSVTLFGDRPAGRTPALCSPQFRMLRVLDLEDAKFKFTQNDIRNIGLLRHMKYLNFARASTIYTLPRSIGKLQCLQILNMREANISALTTEVTKLQNLRSLRCSRRSG |
Gene3D: G3DSA:3.80.10.10 | 705-772 | G3DSA:3.80.10.10 | DTKGVRVPRGIDNLKELQILEVVDINRTSRKAIEELGELIQLRKLSVTTKGATNKKYQIFCAAIEKLS |
FPrintScan: PR00364 IPR000767
|
719-735 | DISEASERSIST Disease resistance protein
|
KELQILEVVDINRTSRK |
Gene3D: G3DSA:3.80.10.10 | 773-928 | G3DSA:3.80.10.10 | SLQSLRVDAEGFSDTGTLEWLNSIACPPPFLKTLKLNGSLADTPNWFGNLKQLVKMCLSRCVLQDGKTMEILGALPNLMVLRLYRNAYADEKMAFRRGTFPNLRCLDIYLLKQLREIRFEEGTSPTMESIEIYGCRLESGIIGIKHLPRLKIISLE |
List of References
Shaohong Qu, Guifu Liu, Bo Zhou, Maria Bellizzi, Lirong Zeng, Liangying Dai, Bin Han, Guo-Liang Wang
The broad-spectrum blast resistance gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice.
Genetics: 2006, 172(3);1901-14
PubMed:16387888
WorldCat.org
DOI
(P p)
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