PRGDB00048940 (NBS-LRR type disease resistance protein)
| NBS-LRR type disease resistance protein | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 83031704 (DQ119306) |
| Gene Class | NL |
| Domain Type | NBS, LRR, Others |
| Gene Species | Musa acuminata |
DNA Sequence
ATGCATCACTCCCCCTTCACCACGAGCCGCACGGGAGCCGGTGGAGGAACTGCCGTTGAAACGCAGACCATCGGGATGGAGTTGGCCCTAAGCCAGCTCCTATCCCGGTTTGACGACACGGAGAAGAGCATCATCGGCGTCCACGGGCTAGGGGGCATGGGCAAGACGACGCTCCTCAAAACGCCCAACAACGAGCTCAAGGAGAATACCCGCGATTACCATGTGGTGATCATGATCGAGGTTGCCAACTCCGAGACGCTCAACGTCGTCGATATGCAGAAGATCATCGCCAATCGGCTGGGTCTGCCGTGGAACGAGAGCGAGACGGAGAGGGAGCGATCCACCTTTCTGCGCAGGGCCCTGAGGAGGAAGAAGTTCGTTGTCCTGCTCGACGACGTCTGGAAAAAGTTCCAGTTGGCGGACGTGGGAATCCCCACGCCAAGCTCCGACAACGGGTGTAAGCTGATCGTCGCCTCGCGGTCGAACCAGGTGTGCGTCGAGATGGGCGACAAGGAGCCCATGGAGATGCCCTGCTTGAACGAGAATGAATCACTGAGGTTGTTCCGGAGCAACTTGATGGCCGAGGTCAGTGCCGCCATCGACCATGACAGCGACATGAGAGAAAGCGCCATGGATATCATACAGAGCTGCGGCGGCCTTCCACTAGCACTCAACGTCGTAGGCTGCGCTCTCGCGTGCAGCATGGATGCGGTGGAATGGAAGCAAGCGGCAAGAGCAATGAGGGCGATACTCGTGGAGGATCAATCTCTAGAGG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR type disease resistance protein | NBS-LRR type disease resistance protein [Musa acuminata]. | MHHSPFTTSRTGAGGGTAVETQTIGMELALSQLLSRFDDTEKSIIGVHGLGGMGKTTLLKTPNNELKENTRDYHVVIMIEVANSETLNVVDMQKIIANRLGLPWNESETERERSTFLRRALRRKKFVVLLDDVWKKFQLADVGIPTPSSDNGCKLIVASRSNQVCVEMGDKEPMEMPCLNENESLRLFRSNLMAEVSAAIDHDSDMRESAMDIIQSCGGLPLALNVVGCALACSMDAVEWKQAARAMRAILVEDQSLE |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52540 | 6-254 | SSF52540 | FTTSRTGAGGGTAVETQTIGMELALSQLLSRFDDTEKSIIGVHGLGGMGKTTLLKTPNNELKENTRDYHVVIMIEVANSETLNVVDMQKIIANRLGLPWNESETERERSTFLRRALRRKKFVVLLDDVWKKFQLADVGIPTPSSDNGCKLIVASRSNQVCVEMGDKEPMEMPCLNENESLRLFRSNLMAEVSAAIDHDSDMRESAMDIIQSCGGLPLALNVVGCALACSMDAVEWKQAARAMRAILVED |
| HMMPfam: PF00931 IPR002182
|
33-254 | NB-ARC,NBS NB-ARC
|
LLSRFDDTEKSIIGVHGLGGMGKTTLLKTPNNELKENTRDYHVVIMIEVANSETLNVVDMQKIIANRLGLPWNESETERERSTFLRRALRRKKFVVLLDDVWKKFQLADVGIPTPSSDNGCKLIVASRSNQVCVEMGDKEPMEMPCLNENESLRLFRSNLMAEVSAAIDHDSDMRESAMDIIQSCGGLPLALNVVGCALACSMDAVEWKQAARAMRAILVED |
| Gene3D: G3DSA:3.40.50.300 | 38-134 | G3DSA:3.40.50.300 | DDTEKSIIGVHGLGGMGKTTLLKTPNNELKENTRDYHVVIMIEVANSETLNVVDMQKIIANRLGLPWNESETERERSTFLRRALRRKKFVVLLDDVW |
| FPrintScan: PR00364 IPR000767
|
44-59 | DISEASERSIST Disease resistance protein
|
IIGVHGLGGMGKTTLL |
| HMMPanther: PTHR23155 | 44-214 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | IIGVHGLGGMGKTTLLKTPNNELKENTRDYHVVIMIEVANSETLNVVDMQKIIANRLGLPWNESETERERSTFLRRALRRKKFVVLLDDVWKKFQLADVGIPTPSSDNGCKLIVASRSNQVCVEMGDKEPMEMPCLNENESLRLFRSNLMAEVSAAIDHDSDMRESAMDII |
| HMMPanther: PTHR23155:SF119 | 44-214 | PTHR23155:SF119,RFL1 (RPS5-LIKE 1) | IIGVHGLGGMGKTTLLKTPNNELKENTRDYHVVIMIEVANSETLNVVDMQKIIANRLGLPWNESETERERSTFLRRALRRKKFVVLLDDVWKKFQLADVGIPTPSSDNGCKLIVASRSNQVCVEMGDKEPMEMPCLNENESLRLFRSNLMAEVSAAIDHDSDMRESAMDII |
| FPrintScan: PR00364 IPR000767
|
120-134 | DISEASERSIST Disease resistance protein
|
ALRRKKFVVLLDDVW |
| FPrintScan: PR00364 IPR000767
|
217-231 | DISEASERSIST Disease resistance protein
|
CGGLPLALNVVGCAL |
List of Contributions
There has not been any contribution yet.
