PRGDB00049008 (Ve)

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Ve
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 34761799 (AY311527)
Gene Class Unknown
Domain Type LRR, LRR, Ser-Thr Kinase, Ser-Thr Kinase
Gene Species Solanum torvum

Comment?

Solanum torvum verticillium wilt disease resistance protein precursor (Ve) mRNA, complete cds.

DNA Sequence

ATGAGATTTTTACACTTTCTATGGCTCTTCTTGATACCCTTTTTCCAAATCCTATCAGGTATTGAGATTTTCTTGGTTTCCTCTCAATGTCTTGATCATCAAAAGTCATTGTTGCTGAAGTTAAATGGCACCCTCCAATATGATTCTAGTTTGTCAACAAAGTTGGCACGTTGGAACCAAAACACAAGTGAATGTTGCAATTGGGATGGGGTTACATGTGATCTCTCTGGTCATGTGATTGCCTTGGAACTTGATAATGAGACTATTTCTAGTGGAATTGAGAATTCAAGTGCTCTTTTCAGTCTTCAGTATCTTGAGAAGCTAAATTTGGCTTACAACAGGTTCAGTGTTGGCATACCAGTCGGTATATCCAACCTCACCAACTTGAAGTACCTGAATTTATCGAATGCTGGTTTTCTTGGCCAAATTCCTATGATGTTATCAAGATTAACAAGGCTAGTTACTCTTGATCTCTCAACTCTTTTCCCTGATGCAATCCATCCACTAAAACTTGAGAATCCCAATTTGACACACTTCATTGAGAACTCAACAGAGCTTAGAGAGCTTTACCTTGATGGTGTTGATCTTTCAGCTCAAAGGGCTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTAACTTGACCGTCTTGAGCTTGCGTACTTGTCAAATTTCAGGGCCGATTGATGACTCACTTTCTCAGCTTCAGTTTCTCTCTATAATCCGTCTTGACCAGAACAATCTCTCTACCACAGTTCCTGAATATTTTTCCAATTTCTCCAACCTAACTACCTTGACTCTCGGCTCTTGTAATCTGCAGGGAACATTTCCGGAAAGAATCTTTCAGGTATCAGTTTTAGAGGTTTTGGAGCTGTCAAATAACAAGTTGCTTAGTGGTAGTATTCAGAATTTTCCTCGATATGGATCTTTGAGGAGGATATCACTAAGCTACACCAGCTTTTCTGGTTCATTGCCAGAGTCCATTTCGAACCTTCAAAATCTGTCCAGGTTAGAGCTCTCCAATTGCAATTTCAATGGTCCAATACCTTCCACAATGGCAAACCTTACCAATCTTGTTTATTTAGATTTCTCCTTCAACAACTTCACTGGTTTTATTCCATATTTCCAACGGTCCAAGAAACTCACCTACTTAGACCTTTCACGTAATGGTCTAACTGGTCTCTTGTCTAGAGCTCATTTTGAAGGACTCTCAGAGCTTGTCTACATGAGTTTAGGGAACAATTCACTCAACGGGATCCTTCCTGCAGAAATATTTGAGCTCCCCTCCTTGCAGCAGCTTTCTCTTTACAGCAATCAGTTTGTTGGCCAAGTCGATGAGTTCCGCAATGCATCCTCCTCTCCGTTAGATACAATCGATTTGAGAAACAACCACCTGAATGGTTCAATTCCCAAGTCTATGTTTGAAGTTGGGAGGCTTAAGGTCCTCTCACTTTCTTTCAACTTCTTTAGTGGGACAGTGTCCCTTGATCTCATTGGGAAGCTGAGCAACCTTTCAAAACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGCAGCAATTCTACCTCTTTCGCATTTCCCCAGTTGAGTATATTGAAATTAGCTTCTTGTCGGCTGCAAAAGTTCCCTGATCTCAAGAATCAGTCAAGGATGATCCACTTAGACCTTTCAGACAACCAAATAGGGGGGGCAATACCAAATTGGATTTGGGGAATTGGAGGTGGGGCTCTTGCTCACCTGAATCTTTCTTTCAATCATCTGGAGTACGTGGAACAGCCGTACAATGCTTCCAACAATCTTGTAGTCTTTGACTTGCATTCCAACAATATAAAAGGTGACTTACCAATTCCACCTCCCTCTGCCATCTATGTGGACTACTCGAGCAATAATTTAAACAATTCCATCCCACTTGATATTGGAAATTCTCTTGCTCTTGCCTCCTTTTTCTCGATAGCAAACAATAGCATCACTGGAATGATTCCTGAATCCATATGCAACATCAGCTACCTTCAAGTTCTTGACTTGTCTAACAATAAATTGAGTGGAACAATACCACCATGTTTATTGCATAATAGTACATCTCTTGGAGTGCTGAATCTAGGGAACAATAGACTCCATGGTGTTATACCAGATTCATTTCCAATTGGTTGTGCTCTAAAAACTTTAGACCTTAGTAGGAATACCTTTGAAGGGAAGCTACCAAAATCGCTTGTCAACTGCACATTGTTGGAGGTCCTGAATGTTGGAAATAACAGACTTGTCGATCGCTTCCCATGCATGCTGAGTAACTCAAACAGTCTGAGCGTCCTAGTTTTGCGCTCCAATCAATTCAATGGAAATCTTACATGTGATATAACCACAAATAGCTGGCAGGATCTCCAGATCATAGATATAGCTTCCAACAGGTTTACTGGTGTGTTGAATCCGGAATGCTTTTCTAATTGGAGAGGAATGATAGTTGCACATGATAACGTGGAGACAGCACACAATCATATCCAGTATAAGTTCCTCCAACTAAGTAACTTTTACTATCAGGACACAGTGACATTAACCATCAAAGGCATGGAGCTGGAGCTTGTGAAGATTCTCAGAGTCTTCACATCTATTGATTTCTCTTCAAATAGATTTCACGGAATGATACCAGACACGGTTGGGGATCTCAGCTCGCTTTATCTTCTGAACCTGTCATACAATGCCCTTGAAGGACCAATTCCAAAATCAGTAGGGAAGCTACAAATGCTTGAATCACTAGACCTGTCAACAAACCATCTGTCCGGAGAGATCCCCTCAGAGCTTGCAAGTCTCACATTCTTAGCTGCTTTGAACGTATCATTCAACAATTTGTTTGGCAAAATCCCGCAAGGTATTCAGCTTCAAACATTCTCAGGAGATTCCTTTGAAGGAAACCGAGGCCTATGCGGGTTCCCTCTGAGCAACAGTTGCAAAAGTGATGCTTCAGAGTTGACACCAGCACCAAGTTCTCAAGATGACTCTTATGATTGGCAGTTCATATTTAAGGGTGTGGGATATGGAGTAGGGGCAGCAGTCTCCATTGCACCTCTGTTGTTTTACAAGCGAGGGAGGAAATACTGTGACAAACATTTGGAGAGAATGCTTAAACTGATGTTTCCAAGATTTGGGTTCACTTACACCAGATTTCACCCTGGGAAGGTTGTGGCAGTGGAACACTACGAAGATGAGACCCCAGATGACACCGAAGACGACGATGAGGGGGGAAAGGAAGCATCTCTTGGGCGTTATTGTGTCTTCTGTAGTAAACTTGATTTTCAAAGAAAGGAAGCAATACATGATCCAAAATGCACTTGTCATATGTCATCATCCCTCATTTCTTTTCCTCTTGCACCATCCTCTTCTTCACCTTTATTGGTCATATGTCACAAAAAGTTTTGA


Protein sequences

Name Description Sequence
verticillium wilt disease resistance protein precursor verticillium wilt disease resistance protein precursor [Solanum torvum].

MRFLHFLWLFLIPFFQILSGIEIFLVSSQCLDHQKSLLLKLNGTLQYDSSLSTKLARWNQNTSECCNWDGVTCDLSGHVIALELDNETISSGIENSSALFSLQYLEKLNLAYNRFSVGIPVGISNLTNLKYLNLSNAGFLGQIPMMLSRLTRLVTLDLSTLFPDAIHPLKLENPNLTHFIENSTELRELYLDGVDLSAQRAEWCQSLSSYLPNLTVLSLRTCQISGPIDDSLSQLQFLSIIRLDQNNLSTTVPEYFSNFSNLTTLTLGSCNLQGTFPERIFQVSVLEVLELSNNKLLSGSIQNFPRYGSLRRISLSYTSFSGSLPESISNLQNLSRLELSNCNFNGPIPSTMANLTNLVYLDFSFNNFTGFIPYFQRSKKLTYLDLSRNGLTGLLSRAHFEGLSELVYMSLGNNSLNGILPAEIFELPSLQQLSLYSNQFVGQVDEFRNASSSPLDTIDLRNNHLNGSIPKSMFEVGRLKVLSLSFNFFSGTVSLDLIGKLSNLSKLELSYNNLTVDASSSNSTSFAFPQLSILKLASCRLQKFPDLKNQSRMIHLDLSDNQIGGAIPNWIWGIGGGALAHLNLSFNHLEYVEQPYNASNNLVVFDLHSNNIKGDLPIPPPSAIYVDYSSNNLNNSIPLDIGNSLALASFFSIANNSITGMIPESICNISYLQVLDLSNNKLSGTIPPCLLHNSTSLGVLNLGNNRLHGVIPDSFPIGCALKTLDLSRNTFEGKLPKSLVNCTLLEVLNVGNNRLVDRFPCMLSNSNSLSVLVLRSNQFNGNLTCDITTNSWQDLQIIDIASNRFTGVLNPECFSNWRGMIVAHDNVETAHNHIQYKFLQLSNFYYQDTVTLTIKGMELELVKILRVFTSIDFSSNRFHGMIPDTVGDLSSLYLLNLSYNALEGPIPKSVGKLQMLESLDLSTNHLSGEIPSELASLTFLAALNVSFNNLFGKIPQGIQLQTFSGDSFEGNRGLCGFPLSNSCKSDASELTPAPSSQDDSYDWQFIFKGVGYGVGAAVSIAPLLFYKRGRKYCDKHLERMLKLMFPRFGFTYTRFHPGKVVAVEHYEDETPDDTEDDDEGGKEASLGRYCVFCSKLDFQRKEAIHDPKCTCHMSSSLISFPLAPSSSSPLLVICHKKF


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420:SF473
4-1028 PTHR24420:SF473,SUBFAMILY NOT NAMED

LHFLWLFLIPFFQILSGIEIFLVSSQCLDHQKSLLLKLNGTLQYDSSLSTKLARWNQNTSECCNWDGVTCDLSGHVIALELDNETISSGIENSSALFSLQYLEKLNLAYNRFSVGIPVGISNLTNLKYLNLSNAGFLGQIPMMLSRLTRLVTLDLSTLFPDAIHPLKLENPNLTHFIENSTELRELYLDGVDLSAQRAEWCQSLSSYLPNLTVLSLRTCQISGPIDDSLSQLQFLSIIRLDQNNLSTTVPEYFSNFSNLTTLTLGSCNLQGTFPERIFQVSVLEVLELSNNKLLSGSIQNFPRYGSLRRISLSYTSFSGSLPESISNLQNLSRLELSNCNFNGPIPSTMANLTNLVYLDFSFNNFTGFIPYFQRSKKLTYLDLSRNGLTGLLSRAHFEGLSELVYMSLGNNSLNGILPAEIFELPSLQQLSLYSNQFVGQVDEFRNASSSPLDTIDLRNNHLNGSIPKSMFEVGRLKVLSLSFNFFSGTVSLDLIGKLSNLSKLELSYNNLTVDASSSNSTSFAFPQLSILKLASCRLQKFPDLKNQSRMIHLDLSDNQIGGAIPNWIWGIGGGALAHLNLSFNHLEYVEQPYNASNNLVVFDLHSNNIKGDLPIPPPSAIYVDYSSNNLNNSIPLDIGNSLALASFFSIANNSITGMIPESICNISYLQVLDLSNNKLSGTIPPCLLHNSTSLGVLNLGNNRLHGVIPDSFPIGCALKTLDLSRNTFEGKLPKSLVNCTLLEVLNVGNNRLVDRFPCMLSNSNSLSVLVLRSNQFNGNLTCDITTNSWQDLQIIDIASNRFTGVLNPECFSNWRGMIVAHDNVETAHNHIQYKFLQLSNFYYQDTVTLTIKGMELELVKILRVFTSIDFSSNRFHGMIPDTVGDLSSLYLLNLSYNALEGPIPKSVGKLQMLESLDLSTNHLSGEIPSELASLTFLAALNVSFNNLFGKIPQGIQLQTFSGDSFEGNRGLCGFPLSNSCKSDASELTPAPSSQDDSYDWQFIFKGVGYGVGAAVSIAPLLFYKR

HMMPanther: PTHR24420
4-1028 PTHR24420,FAMILY NOT NAMED

LHFLWLFLIPFFQILSGIEIFLVSSQCLDHQKSLLLKLNGTLQYDSSLSTKLARWNQNTSECCNWDGVTCDLSGHVIALELDNETISSGIENSSALFSLQYLEKLNLAYNRFSVGIPVGISNLTNLKYLNLSNAGFLGQIPMMLSRLTRLVTLDLSTLFPDAIHPLKLENPNLTHFIENSTELRELYLDGVDLSAQRAEWCQSLSSYLPNLTVLSLRTCQISGPIDDSLSQLQFLSIIRLDQNNLSTTVPEYFSNFSNLTTLTLGSCNLQGTFPERIFQVSVLEVLELSNNKLLSGSIQNFPRYGSLRRISLSYTSFSGSLPESISNLQNLSRLELSNCNFNGPIPSTMANLTNLVYLDFSFNNFTGFIPYFQRSKKLTYLDLSRNGLTGLLSRAHFEGLSELVYMSLGNNSLNGILPAEIFELPSLQQLSLYSNQFVGQVDEFRNASSSPLDTIDLRNNHLNGSIPKSMFEVGRLKVLSLSFNFFSGTVSLDLIGKLSNLSKLELSYNNLTVDASSSNSTSFAFPQLSILKLASCRLQKFPDLKNQSRMIHLDLSDNQIGGAIPNWIWGIGGGALAHLNLSFNHLEYVEQPYNASNNLVVFDLHSNNIKGDLPIPPPSAIYVDYSSNNLNNSIPLDIGNSLALASFFSIANNSITGMIPESICNISYLQVLDLSNNKLSGTIPPCLLHNSTSLGVLNLGNNRLHGVIPDSFPIGCALKTLDLSRNTFEGKLPKSLVNCTLLEVLNVGNNRLVDRFPCMLSNSNSLSVLVLRSNQFNGNLTCDITTNSWQDLQIIDIASNRFTGVLNPECFSNWRGMIVAHDNVETAHNHIQYKFLQLSNFYYQDTVTLTIKGMELELVKILRVFTSIDFSSNRFHGMIPDTVGDLSSLYLLNLSYNALEGPIPKSVGKLQMLESLDLSTNHLSGEIPSELASLTFLAALNVSFNNLFGKIPQGIQLQTFSGDSFEGNRGLCGFPLSNSCKSDASELTPAPSSQDDSYDWQFIFKGVGYGVGAAVSIAPLLFYKR

Gene3D: G3DSA:3.80.10.10
29-297 G3DSA:3.80.10.10

QCLDHQKSLLLKLNGTLQYDSSLSTKLARWNQNTSECCNWDGVTCDLSGHVIALELDNETISSGIENSSALFSLQYLEKLNLAYNRFSVGIPVGISNLTNLKYLNLSNAGFLGQIPMMLSRLTRLVTLDLSTLFPDAIHPLKLENPNLTHFIENSTELRELYLDGVDLSAQRAEWCQSLSSYLPNLTVLSLRTCQISGPIDDSLSQLQFLSIIRLDQNNLSTTVPEYFSNFSNLTTLTLGSCNLQGTFPERIFQVSVLEVLELSNNKLL

HMMPfam: PF08263
IPR013210
32-74 LRRNT_2
Leucine-rich repeat-containing N-terminal, type 2

DHQKSLLLKLNGTLQYDSSLSTKLARWNQNTSECCNWDGVTCD

superfamily: SSF52047
59-304 SSF52047,LRR

NQNTSECCNWDGVTCDLSGHVIALELDNETISSGIENSSALFSLQYLEKLNLAYNRFSVGIPVGISNLTNLKYLNLSNAGFLGQIPMMLSRLTRLVTLDLSTLFPDAIHPLKLENPNLTHFIENSTELRELYLDGVDLSAQRAEWCQSLSSYLPNLTVLSLRTCQISGPIDDSLSQLQFLSIIRLDQNNLSTTVPEYFSNFSNLTTLTLGSCNLQGTFPERIFQVSVLEVLELSNNKLLSGSIQNF

HMMPfam: PF12799
104-137 LRR_4,Leucine Rich repeats (2 copies)

YLEKLNLAYNRFSVGIPVGISNLTNLKYLNLSNA

Gene3D: G3DSA:3.80.10.10
303-536 G3DSA:3.80.10.10

NFPRYGSLRRISLSYTSFSGSLPESISNLQNLSRLELSNCNFNGPIPSTMANLTNLVYLDFSFNNFTGFIPYFQRSKKLTYLDLSRNGLTGLLSRAHFEGLSELVYMSLGNNSLNGILPAEIFELPSLQQLSLYSNQFVGQVDEFRNASSSPLDTIDLRNNHLNGSIPKSMFEVGRLKVLSLSFNFFSGTVSLDLIGKLSNLSKLELSYNNLTVDASSSNSTSFAFPQLSILKL

superfamily: SSF52047
309-573 SSF52047,LRR

SLRRISLSYTSFSGSLPESISNLQNLSRLELSNCNFNGPIPSTMANLTNLVYLDFSFNNFTGFIPYFQRSKKLTYLDLSRNGLTGLLSRAHFEGLSELVYMSLGNNSLNGILPAEIFELPSLQQLSLYSNQFVGQVDEFRNASSSPLDTIDLRNNHLNGSIPKSMFEVGRLKVLSLSFNFFSGTVSLDLIGKLSNLSKLELSYNNLTVDASSSNSTSFAFPQLSILKLASCRLQKFPDLKNQSRMIHLDLSDNQIGGAIPNWIWG

HMMPfam: PF00560
IPR001611
357-376 LRR_1
Leucine-rich repeat

NLVYLDFSFNNFTGFIPYFQ

HMMPfam: PF13855
380-439 LRR_8,Leucine rich repeat

KLTYLDLSRNGLTGLLSRAHFEGLSELVYMSLGNNSLNGILPAEIFELPSLQQLSLYSNQ

FPrintScan: PR00019
381-394 LEURICHRPT,Leucine-rich repeat signature

LTYLDLSRNGLTGL

Gene3D: G3DSA:3.80.10.10
537-715 G3DSA:3.80.10.10

ASCRLQKFPDLKNQSRMIHLDLSDNQIGGAIPNWIWGIGGGALAHLNLSFNHLEYVEQPYNASNNLVVFDLHSNNIKGDLPIPPPSAIYVDYSSNNLNNSIPLDIGNSLALASFFSIANNSITGMIPESICNISYLQVLDLSNNKLSGTIPPCLLHNSTSLGVLNLGNNRLHGVIPDSF

HMMPfam: PF13516
554-566 LRR_6,Leucine Rich repeat

IHLDLSDNQIGGA

superfamily: SSF52058
621-983 SSF52058,LRR

PSAIYVDYSSNNLNNSIPLDIGNSLALASFFSIANNSITGMIPESICNISYLQVLDLSNNKLSGTIPPCLLHNSTSLGVLNLGNNRLHGVIPDSFPIGCALKTLDLSRNTFEGKLPKSLVNCTLLEVLNVGNNRLVDRFPCMLSNSNSLSVLVLRSNQFNGNLTCDITTNSWQDLQIIDIASNRFTGVLNPECFSNWRGMIVAHDNVETAHNHIQYKFLQLSNFYYQDTVTLTIKGMELELVKILRVFTSIDFSSNRFHGMIPDTVGDLSSLYLLNLSYNALEGPIPKSVGKLQMLESLDLSTNHLSGEIPSELASLTFLAALNVSFNNLFGKIPQGIQLQTFSGDSFEGNRGLCGFPLSNSC

HMMPfam: PF13855
653-707 LRR_8,Leucine rich repeat

IANNSITGMIPESICNISYLQVLDLSNNKLSGTIPPCLLHNSTSLGVLNLGNNRL

FPrintScan: PR00019
669-682 LEURICHRPT,Leucine-rich repeat signature

ISYLQVLDLSNNKL

Gene3D: G3DSA:3.80.10.10
721-980 G3DSA:3.80.10.10

LKTLDLSRNTFEGKLPKSLVNCTLLEVLNVGNNRLVDRFPCMLSNSNSLSVLVLRSNQFNGNLTCDITTNSWQDLQIIDIASNRFTGVLNPECFSNWRGMIVAHDNVETAHNHIQYKFLQLSNFYYQDTVTLTIKGMELELVKILRVFTSIDFSSNRFHGMIPDTVGDLSSLYLLNLSYNALEGPIPKSVGKLQMLESLDLSTNHLSGEIPSELASLTFLAALNVSFNNLFGKIPQGIQLQTFSGDSFEGNRGLCGFPLS

HMMPfam: PF13855
721-778 LRR_8,Leucine rich repeat

LKTLDLSRNTFEGKLPKSLVNCTLLEVLNVGNNRLVDRFPCMLSNSNSLSVLVLRSNQ

HMMPfam: PF00560
IPR001611
916-937 LRR_1
Leucine-rich repeat

LESLDLSTNHLSGEIPSELASL


List of References

Jiong Fei, Yourong Chai, Jin Wang, Juan Lin, Xiaofen Sun, Chao Sun, Kaijing Zuo, Kexuan Tang
CDNA cloning and characterization of the Ve homologue gene StVe from Solanum torvum Swartz.
DNA Seq.: 2004, 15(2);88-95
PubMed:15346762 WorldCat.org (P p)





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