PRGDB00049096 (T3F20.26)
| T3F20.26 | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 7109457 (AC018748) |
| Gene Class | RLP |
| Domain Type | LRR, Ser-Thr Kinase, Ser-Thr Kinase, Ser-Thr Kinase |
| Gene Species | Arabidopsis thaliana |
DNA Sequence
AGGTTACATGGCTCCAGAGTATGCAATGAGAGGTTACTTAACAGACAAAGCAGATGTTTATAGCTTCGGTGTAGTCTGTTTAGAGATTGTTAGCGGAAAGAGCAACACAAATTACAGACCAAAAGAAGAGTTTATTTACCTTCTTGACTGGGCATATGTCTTGCAAGAACAAGGGAGTCTTCTAGAACTCGTGGATCCAGATCTCGGTACAAGCTTTTCGAAGAAAGAAGCAATGAGGATGTTGAACATAGCTTTACTCTGTACAAACCCATCTCCAACATTGAGACCACCGATGTCATCTGTTGTAAGTATGCTACAAGGAAAAATCAAAGTCCAACCACCACTGGTGAAACGTGAAGCTGATCCAAGTGGTTCAGCCGCAATGAGGTTTAAGGCCTTAGAGCATTTGTCACAAGACAGCGAGTCACAAGTCTCAACCTATACAAGAAACAAAGAACACAAAAGCTCCTCCTCGATGGACGGTCCTTGGGTCGATTCTTCCTTCTCTGATCCGAGCAAAGATGTTAGCCTATTACAGCAAGAAGAAGGAAATTCATCATCTTCGTCGAGGAGACTGTTAGATGATCTTACTGATGTGGAGATTGAGTAAGCACAGAGAAACAAAGACTTCACTTGGATTGGTCCACGAGGAACAAGGTATGCATAGGGATTGCGAAAGGATTGGCTTATCTACACGAGGAATCAAGGCTGAAGATTGTGCACAGAGACATTAAAGCGACAAATGTGCTTCTTGATCTGTCTCTAAATGCTAAGATCTCTGATTTTGGTCTAGCGAAACTCGATGAAGAAGAGAATACACATATCAGCACAAGGATTGCAGGAACAATGGTGTTCTCGCTGATGGGATGACCATAGCGGTGAAGCAGCTTTCATCGAAATCTAAGCAAGGAAACCGAGAATTTGTGACTGAGATCGGTATGATATCTGCGTTGCAACACCCTAATCTTGTGAAACTTTATGGTTGTTGCATCGAAGGGAAAGAGCTTTTGCTTGTGTATGAATACTTAGAGAACAACAGTCTCGCTCGCGCACTCTTTGAAGAGCTTCGGGGACTCGATTTGCAGACAGGATCGTTCACATTGAAGCAAATCAAACGTGCTACTAACAACTTTGATCCAGAAAACAAGATTGGAGAAGGAGGATTTGGACCGGTTTATAAGATTTCAAGGTTGATACCGGAAAACCATTGTCCAATGGAGTAGTTGCAGGCATTGTAATCGCAGCGTGTGTAGCTTTCGGGTTGCTGGTACTTGTAATCCTCAGGCTAACAGGTTACTTAGGTGGAAAAGAAGTGGATGAAAATGGGGATTTTGTTGGAGAGGGACTTTAACATAGCACAGAGAGCAGGTGGAGTTGGTAAACCGTTCCTAAGGCAAGTTGATGAAGTTCAAGTGAATGGAAGTACGTTGGAGATTCATTTGAAGTGGACAGGAAAAGGCACAAACGTAATACCAACAAGAGGTGTTTACGGGCCTCTCATATCCGCTATAACCGTCACACCGAATTCTTCCTTGTTCATTAACTGTGGAGGAAACCGACTCAAGGTTGATAAAGACGAGTATGCGGATGACTTAAACAAAAGAGGAGCATCAACATTCTCTTCTGTCTCTGAAAGATGGGGATACAGTAGTTCTGGAGCTTGGTTAGGCAATGACGGTGCCACTTACTTAGCAACAGATACGTTTAACTTGATCAATGAATCAACTCCAGAGTATTACAAAACAGCCCGTCTCGCTTCACAATCACTCAAGTACTATGGACTATGCATGAGAAGAGGAAGTTACAAAGTTCAGCTCTATTTTGCAGAGATAATGTTCTCAAATGATCAGACTTATAGTAGCTTAGGGCGGCGACTATTCGACATTTATGTTCAATGTCCAATGGTGCTTAAGAAAGGATCTTCCGTGTCCTGGAGACGCACACCGTATCTGAATAATAACTCATTGACTGGTCCAGTTCCTCAGTTCATTCTTGATAGTAAACAAAACATAGATTTAAGCTCAAACATGTTAAATGGTACAATTCCAGACACATTTCGGAGTCTGAACGCATTCAACTTTATGGTACTAAGAAACTGTTTGATAAGGGAACCTATACCGGAGTACATCGGTACTTCCATGACTATGTTGAAGTTACTGAGGATAACAGATTTGCGTGGACCAACTTCTCCTTTTCCAGACCTTCAAAATATGACGAATATGGAAAGATTAGACCTCCAAGGCACATCAATGGAAGGTCCTATTCCAGCTTCGATTTCAAACTTGAAAAACCTGACTGAATTTCGGATTGATGGAAACTCTCTATCTGGGAAGATACCTGATTTTATTGGAAACTGGACTCGGCTCGTTAGGCTGCTAATCTCTTCAAATAACATCACGGGTCGGATCCCTGAGTCCTTGAGCAATCTCAAGAATTTGACTAATTTGATTATGGAAAGTAATTTATTCACAGGACAACTTCCTCCAAACCTAGGGAACTTAAGAAGCTTGAAAAGATTGGCTGTAACCGGAAACCGACTCTCTGGACCATTTCCTCCTCAGCTCGGACAGATTACTACACTTACTGATGTACAGCTTAGAGGTTTCAATTTGCGAGGAATTATACCGCCTGAATTCGGGAACCTCACACGTCTTACAGAGATTTCAAACATTGCGAACGATCTTTAGAAAGCTTCAAAACCAAACAGTGAACATCGAAAGAACTTCTTGTTTGGACAGAAAATGGAACTTTGTTGCCGAGTCAACCTCCAAGCTACCAACCAGTAACATTACCTGCGACTGTACTTTCAACGCCAGCTCAGTCTGTCGTGTCACAAACATATGGGTTTCTTTTTCTCGACCCGGAAAGGTCTTCTTCTCATCATCTTCATTTGCTTGGATATTTTCGGATCAAATGCTCAACTTTTGCCAGAAGATGAAG
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 11-961 | FAMILY NOT NAMED,FAMILY NOT NAMED | LLLIIFICLDIFGSNAQLLPEDEVQTLRTIFRKLQNQTVNIERTSCLDRKWNFVAESTSKLPTSNITCDCTFNASSVCRVTNIQLRGFNLRGIIPPEFGNLTRLTEMAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPASISNLKNLTELRITDLRGPTSPFPDLQNMTNMERLVLRNCLIREPIPEYIGTSMTMLKLLDLSSNMLNGTIPDTFRSLNAFNFMYLNNNSLTGPVPQFILDSKQNIVQWCLRKDLPCPGDAHHSSLFINCGGNRLKVDKDEYADDLNKRGASTFSSVSERWGYSSSGAWLGNDGATYLATDTFNLINESTPEYYKTARLASQSLKYYGLCMRRGSYKVQLYFAEIMFSNDQTYSSLGRRLFDIYVQGILLERDFNIAQRAGGVGKPFLRQVDEVQVNGSTLEIHLKWTGKGTNVIPTRGVYGPLISAITVTPNFKVDTGKPLSNGVVAGIVIAACVAFGLLVLVILRLTGYLGGKEVDENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPPLVKREADPSGSAAMRFKALEHLSQDSESQVSTYTRNKEHKSSSSMDGPWVDSSFSDPSKDVSLLQQEEGN |
| Seg: seg | 11-22 | seg | LLLIIFICLDIF |
| HMMPanther: PTHR24420:SF696 | 11-961 | LEUCINE-RICH REPEAT FAMILY PROTEIN / PROTEIN KINASE FAMILY PROTEIN | LLLIIFICLDIFGSNAQLLPEDEVQTLRTIFRKLQNQTVNIERTSCLDRKWNFVAESTSKLPTSNITCDCTFNASSVCRVTNIQLRGFNLRGIIPPEFGNLTRLTEMAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPASISNLKNLTELRITDLRGPTSPFPDLQNMTNMERLVLRNCLIREPIPEYIGTSMTMLKLLDLSSNMLNGTIPDTFRSLNAFNFMYLNNNSLTGPVPQFILDSKQNIVQWCLRKDLPCPGDAHHSSLFINCGGNRLKVDKDEYADDLNKRGASTFSSVSERWGYSSSGAWLGNDGATYLATDTFNLINESTPEYYKTARLASQSLKYYGLCMRRGSYKVQLYFAEIMFSNDQTYSSLGRRLFDIYVQGILLERDFNIAQRAGGVGKPFLRQVDEVQVNGSTLEIHLKWTGKGTNVIPTRGVYGPLISAITVTPNFKVDTGKPLSNGVVAGIVIAACVAFGLLVLVILRLTGYLGGKEVDENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPPLVKREADPSGSAAMRFKALEHLSQDSESQVSTYTRNKEHKSSSSMDGPWVDSSFSDPSKDVSLLQQEEGN |
| superfamily: SSF52058 | 27-322 | L domain-like,LRR | QLLPEDEVQTLRTIFRKLQNQTVNIERTSCLDRKWNFVAESTSKLPTSNITCDCTFNASSVCRVTNIQLRGFNLRGIIPPEFGNLTRLTEMAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPASISNLKNLTELRITDLRGPTSPFPDLQNMTNMERLVLRNCLIREPIPEYIGTSMTMLKLLDLSSNMLNGTIPDTFRSLNAFNFMYLNNNSLTGPVP |
| Gene3D: G3DSA:3.80.10.10 | 76-324 | no description | ITCDCTFNASSVCRVTNIQLRGFNLRGIIPPEFGNLTRLTEMAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPASISNLKNLTELRITDLRGPTSPFPDLQNMTNMERLVLRNCLIREPIPEYIGTSMTMLKLLDLSSNMLNGTIPDTFRSLNAFNFMYLNNNSLTGPVPQF |
| HMMPfam: PF00560 IPR001611
|
161-183 | LRR_1 Leucine-rich repeat
|
SLKRLLISSNNITGRIPESLSNL |
| HMMPfam: PF00560 IPR001611
|
283-304 | LRR_1 Leucine-rich repeat
|
LKLLDLSSNMLNGTIPDTFRSL |
| HMMPfam: PF11721 IPR021720
|
351-534 | Malectin Malectin
|
SLFINCGGNRLKVDKDEYADDLNKRGASTFSSVSERWGYSSSGAWLGNDGATYLATDTFNLINESTPEYYKTARLASQSLKYYGLCMRRGSYKVQLYFAEIMFSNDQTYSSLGRRLFDIYVQGILLERDFNIAQRAGGVGKPFLRQVDEVQVNGSTLEIHLKWTGKGTNVIPTRGVYGPLISAI |
| Seg: seg | 551-563 | seg | GVVAGIVIAACVA |
| superfamily: SSF56112 IPR011009
|
581-890 | Protein kinase-like (PK-like) Protein kinase-like domain
|
KEVDENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQP |
| Gene3D: G3DSA:3.30.200.20 | 598-672 | no description | SFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYG |
| HMMSmart: SM00219 IPR020635
|
611-882 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSML |
| ProfileScan: PS50011 IPR000719
|
611-892 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPPL |
| HMMSmart: SM00220 IPR002290
|
611-880 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVS |
| HMMPfam: PF07714 IPR001245
|
614-882 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
ENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSML |
| Gene3D: G3DSA:1.10.510.10 | 673-879 | no description | CCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVV |
| Seg: seg | 679-692 | seg | ELLLVYEYLENNSL |
| PatternScan: PS00108 IPR008271
|
733-745 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IVHRDIKATNVLL |
| Seg: seg | 953-973 | seg | SLLQQEEGNSSSSSRRLLDDL |
List of Contributions
There has not been any contribution yet.
