PRGDB00049202 (RGA)

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RGA
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 13937095 (AF363802)
Gene Class NL
Domain Type NBS, LRR
Gene Species Phaseolus vulgaris

Comment?

Phaseolus vulgaris putative disease resistance protein OB5 (RGA) gene, partial cds.

DNA Sequence

GGGGGGGTGGGGAAGACGACAATTGCTAGATTAGTCTATGAAGCAGTCAAAGAGAAATTCAAGGTTAGTTGCTTTCTTGAAAACATCAGAGAATTGTCCAAGACAAATGGCTTAGTTCACATTCAAAAGGAAATTCTTTCTCATCTTAATGTAAGAAGAATGATTTTTGTAATCTTTATGATGGGCAAAAAGATAATAGCAAACTCTTTAAGCAACAAAAAGGTACTTCTTGTTCTTGATGATGTAAGTGACATAAGCCAATTGGAGAATTTAGGTGGAAAAAGAGAATGGTTTGGTCCAGGAAGCAGACTAATAATCACAACTAGAGATAAGCACCTGCTAAAGACATATGGAGTGGATATGACTTATAAGGCTAGAGGCTTAGCCCAAAATGAAGCCCTTCAGCTCTTTTGCTTGAAAGCATTTAAACAAGATCAACCTAAAGAAGGGTATTTGAATTTGTGCAAAGGAGTGGTTGAATATGCAAGAGGCCTCCCC


Protein sequences

Name Description Sequence
putative disease resistance protein OB5 putative disease resistance protein OB5 [Phaseolus vulgaris].

GGVGKTTIARLVYEAVKEKFKVSCFLENIRELSKTNGLVHIQKEILSHLNVRRMIFVIFMMGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGPGSRLIITTRDKHLLKTYGVDMTYKARGLAQNEALQLFCLKAFKQDQPKEGYLNLCKGVVEYARGLP


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR11017
1-166 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GGVGKTTIARLVYEAVKEKFKVSCFLENIRELSKTNGLVHIQKEILSHLNVRRMIFVIFMMGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGPGSRLIITTRDKHLLKTYGVDMTYKARGLAQNEALQLFCLKAFKQDQPKEGYLNLCKGVVEYARGLP

HMMPfam: PF00931
IPR002182
1-166 NB-ARC,NBS
NB-ARC

GGVGKTTIARLVYEAVKEKFKVSCFLENIRELSKTNGLVHIQKEILSHLNVRRMIFVIFMMGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGPGSRLIITTRDKHLLKTYGVDMTYKARGLAQNEALQLFCLKAFKQDQPKEGYLNLCKGVVEYARGLP

HMMPanther: PTHR11017:SF20
1-166 PTHR11017:SF20,SUBFAMILY NOT NAMED

GGVGKTTIARLVYEAVKEKFKVSCFLENIRELSKTNGLVHIQKEILSHLNVRRMIFVIFMMGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGPGSRLIITTRDKHLLKTYGVDMTYKARGLAQNEALQLFCLKAFKQDQPKEGYLNLCKGVVEYARGLP

superfamily: SSF52540
1-166 SSF52540

GGVGKTTIARLVYEAVKEKFKVSCFLENIRELSKTNGLVHIQKEILSHLNVRRMIFVIFMMGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGPGSRLIITTRDKHLLKTYGVDMTYKARGLAQNEALQLFCLKAFKQDQPKEGYLNLCKGVVEYARGLP

Gene3D: G3DSA:3.40.50.300
2-117 G3DSA:3.40.50.300

GVGKTTIARLVYEAVKEKFKVSCFLENIRELSKTNGLVHIQKEILSHLNVRRMIFVIFMMGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKREWFGPGSRLIITTRDKHLLKTY


List of References



List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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