PRGDB00049204 (RGA)

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RGA
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 13937091 (AF363800)
Gene Class NL
Domain Type NBS, LRR
Gene Species Phaseolus vulgaris

Comment?

Phaseolus vulgaris putative disease resistance protein SB8 (RGA) gene, partial cds.

DNA Sequence

GGGGGGATGGGGAAAACGACACTTGCTCTAGCAACGTATAATTTGATTGCTCATGATTTTGATGGCTCGTGTTTTCTTCAAAATGTTAGAGAAGAATTAAAAAAGCATGGGTTAAAACACCTCCGAGACCTCATTCTTTCTGAAATACTTGGAGAGAAGAACATCAACTTAGCAGAGAGCAACGCGGAATTTCGTGATACAACAAAGGCTCGTAGGAAGAAAGTTCTCTTGATTCTAGATGATGTTGACAACCGAAAGCTGTTACAAGCATTTGCTGGAAGATCCGATTGGTTTGGTCCCGGCAGCAGAGTTATCATTACAACTCGGGACGAACAACTGCTAAAAACTCATGAGGTTGAAAGAACTGAAGAGGTGGAGGAATTGAACATGATGATTCTCTTCAATTGCTTATTGGGAATGCTTTCAAAAGGGAAAATTATGATCCAAGTTACAAGGACGTCTTCGAAACATGTAGCAACTTATGCTTCTGGCCTCCCCTTCGCCTTC


Protein sequences

Name Description Sequence
putative disease resistance protein SB8 putative disease resistance protein SB8 [Phaseolus vulgaris].

GGMGKTTLALATYNLIAHDFDGSCFLQNVREELKKHGLKHLRDLILSEILGEKNINLAESNAEFRDTTKARRKKVLLILDDVDNRKLLQAFAGRSDWFGPGSRVIITTRDEQLLKTHEVERTEEVEELNMMILFNCLLGMLSKGKIMIQVTRTSSKHVATYASGLPFAF


Domains

Domain Start-End Description Sequence

HMMPanther: PTHR11017:SF20
1-168 PTHR11017:SF20,SUBFAMILY NOT NAMED

GGMGKTTLALATYNLIAHDFDGSCFLQNVREELKKHGLKHLRDLILSEILGEKNINLAESNAEFRDTTKARRKKVLLILDDVDNRKLLQAFAGRSDWFGPGSRVIITTRDEQLLKTHEVERTEEVEELNMMILFNCLLGMLSKGKIMIQVTRTSSKHVATYASGLPFA

HMMPfam: PF00931
IPR002182
1-167 NB-ARC,NBS
NB-ARC

GGMGKTTLALATYNLIAHDFDGSCFLQNVREELKKHGLKHLRDLILSEILGEKNINLAESNAEFRDTTKARRKKVLLILDDVDNRKLLQAFAGRSDWFGPGSRVIITTRDEQLLKTHEVERTEEVEELNMMILFNCLLGMLSKGKIMIQVTRTSSKHVATYASGLPF

HMMPanther: PTHR11017
1-168 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GGMGKTTLALATYNLIAHDFDGSCFLQNVREELKKHGLKHLRDLILSEILGEKNINLAESNAEFRDTTKARRKKVLLILDDVDNRKLLQAFAGRSDWFGPGSRVIITTRDEQLLKTHEVERTEEVEELNMMILFNCLLGMLSKGKIMIQVTRTSSKHVATYASGLPFA

superfamily: SSF52540
2-114 SSF52540

GMGKTTLALATYNLIAHDFDGSCFLQNVREELKKHGLKHLRDLILSEILGEKNINLAESNAEFRDTTKARRKKVLLILDDVDNRKLLQAFAGRSDWFGPGSRVIITTRDEQLL

Gene3D: G3DSA:3.40.50.300
2-85 G3DSA:3.40.50.300

GMGKTTLALATYNLIAHDFDGSCFLQNVREELKKHGLKHLRDLILSEILGEKNINLAESNAEFRDTTKARRKKVLLILDDVDNR

Gene3D: G3DSA:3.40.50.300
120-151 G3DSA:3.40.50.300

ERTEEVEELNMMILFNCLLGMLSKGKIMIQVT


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List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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