PRGDB00049206 (RGA)
RGA | |
---|---|
Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
GenBank | 13937087 (AF363798) |
Gene Class | NL |
Domain Type | NBS, LRR, Others |
Gene Species | Phaseolus vulgaris |
DNA Sequence
GGGGGGATGGGGAAAACGACACTTGCTAAGTTGATCTTCAAAGACACCAACACTGATGCATGTTTTCCGTTGAAGATGTGGGTGTGTGTCTCTAATGATTTTGAGCTTAGAAATTTGCTCATTAAAATCCTCAATTCTACTCCAAACTCAAATAGGGAAAACTTTAATAACTTGGAGACGGAGCAACTTCAAAATCGTTTGAGAAATACACTTCAAGTTCAGAAGTTTTTGCTCGTGTTGGATGATGTGTGGAATGAGGTTCCTGAAAAGTGGCATGAGTTGAAGGAAATAATAGATGTAGGTGTTGAAGGGAGTGAAATCCTAGTGACTACCCGTAGCCATGCAGTAGCTACCGTGATGCACACTAAATCCTCAAATTCGTATCTTCTACAATGTCTCTCTGAAGAGGATTCTCTTTCTCTATTCGTGAAATATGCTTCTGAAGATGGAATGGAAAAACATCCAGAACTATTGGAGATTGGGAAAGAAATTGTAAAAAAATGTGGAGGCCTCCCCCTCGCCTTC
Protein sequences
Name | Description | Sequence |
---|---|---|
putative disease resistance protein SB4 | putative disease resistance protein SB4 [Phaseolus vulgaris]. | GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLAF |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF52540 | 1-175 | SSF52540 | GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLAF |
HMMPanther: PTHR11017 | 1-174 | PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLA |
HMMPanther: PTHR11017:SF20 | 1-174 | PTHR11017:SF20,SUBFAMILY NOT NAMED | GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLA |
HMMPfam: PF00931 IPR002182
|
1-174 | NB-ARC,NBS NB-ARC
|
GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLA |
Gene3D: G3DSA:3.40.50.300 | 2-113 | G3DSA:3.40.50.300 | GMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRS |
FPrintScan: PR00364 IPR000767
|
70-84 | DISEASERSIST Disease resistance protein
|
TLQVQKFLLVLDDVW |
FPrintScan: PR00364 IPR000767
|
168-175 | DISEASERSIST Disease resistance protein
|
CGGLPLAF |
List of References
M I Rivkin, C E Vallejos, P E McClean
Disease-resistance related sequences in common bean.
Genome: 1999, 42(1);41-7
PubMed:10208000
WorldCat.org
(P p)
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