PRGDB00049206 (RGA)

RGA
Gene Type	Putative_R-Genes,_collected_from_NCBI_Protein
GenBank	13937087 (AF363798)
Gene Class	NL
Domain Type	NBS, LRR, Others
Gene Species	Phaseolus vulgaris
	Comment?

Phaseolus vulgaris putative disease resistance protein SB4 (RGA) gene, partial cds.

DNA Sequence

GGGGGGATGGGGAAAACGACACTTGCTAAGTTGATCTTCAAAGACACCAACACTGATGCATGTTTTCCGTTGAAGATGTGGGTGTGTGTCTCTAATGATTTTGAGCTTAGAAATTTGCTCATTAAAATCCTCAATTCTACTCCAAACTCAAATAGGGAAAACTTTAATAACTTGGAGACGGAGCAACTTCAAAATCGTTTGAGAAATACACTTCAAGTTCAGAAGTTTTTGCTCGTGTTGGATGATGTGTGGAATGAGGTTCCTGAAAAGTGGCATGAGTTGAAGGAAATAATAGATGTAGGTGTTGAAGGGAGTGAAATCCTAGTGACTACCCGTAGCCATGCAGTAGCTACCGTGATGCACACTAAATCCTCAAATTCGTATCTTCTACAATGTCTCTCTGAAGAGGATTCTCTTTCTCTATTCGTGAAATATGCTTCTGAAGATGGAATGGAAAAACATCCAGAACTATTGGAGATTGGGAAAGAAATTGTAAAAAAATGTGGAGGCCTCCCCCTCGCCTTC

Protein sequences

Name	Description	Sequence
putative disease resistance protein SB4	putative disease resistance protein SB4 [Phaseolus vulgaris].	GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLAF

Domains

Domain	Start-End	Description	Sequence
superfamily: SSF52540	1-175	SSF52540	GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLAF
HMMPanther: PTHR11017	1-174	PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN	GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLA
HMMPanther: PTHR11017:SF20	1-174	PTHR11017:SF20,SUBFAMILY NOT NAMED	GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLA
HMMPfam: PF00931 IPR002182	1-174	NB-ARC,NBS NB-ARC	GGMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRSHAVATVMHTKSSNSYLLQCLSEEDSLSLFVKYASEDGMEKHPELLEIGKEIVKKCGGLPLA
Gene3D: G3DSA:3.40.50.300	2-113	G3DSA:3.40.50.300	GMGKTTLAKLIFKDTNTDACFPLKMWVCVSNDFELRNLLIKILNSTPNSNRENFNNLETEQLQNRLRNTLQVQKFLLVLDDVWNEVPEKWHELKEIIDVGVEGSEILVTTRS
FPrintScan: PR00364 IPR000767	70-84	DISEASERSIST Disease resistance protein	TLQVQKFLLVLDDVW
FPrintScan: PR00364 IPR000767	168-175	DISEASERSIST Disease resistance protein	CGGLPLAF

List of References

M I Rivkin, C E Vallejos, P E McClean
Disease-resistance related sequences in common bean.
Genome: 1999, 42(1);41-7
PubMed:10208000 WorldCat.org (P p)

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Analyses

Blast

Blast matches against Reference R-Genes. Show