PRGDB00049303 (I2)

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I2
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 77641444 (DQ206205)
Gene Class NL
Domain Type NBS, LRR, Others
Gene Species Nicotiana tabacum

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Nicotiana tabacum clone 3143 I2 (I2) gene, partial cds.

DNA Sequence

TCTAGAGTACCTTCAACATCTTTGGTTGATGAATCTGATATCTTTGGTAGGCAGAATGAAATAGAGACTTTGGTTGACCGTTTATTGTCTGTTGATGCCGATGGAAAAAAGTATAGTGTAATTCCTATTGTTGGAAAGGCGGGGGTTGGCAAGACAACACTTGCTAAAGCTGTTTACAATAATGAGAAGGTGAAAGTCCATTTTGATTTGAAAGCTTGGTTCTGTGTGTCTGAACCATATGATGCTTCTAGAATAACAAAAGGATTACTTCAAGAAATTGGTTCATCCAACTTAATGGTTGATAACAATCTTAATCAGCTTCAAATCAAATTGAAGGAAAGCTTAAAAGGAAAAAAGTTTCTTATTGTTTTAGATGATATTTGGAATGACAAGTACACCGAGTGGGATGACTTGAGAATTCCTTTTGCACAAGGAGAAATTGGAAGTAAGATCATTGTGACGACACGTAAGGAGAGTGTTGCCGAGATGATGGTTAGTCGGCCAATTATCATGGAGATTCTTTCTAGCGAATTCTCTTGGCCTTTATTCAAAAGACATGCATTTGAAAATAGAGATCCCAAGGAACATCCAGAACTTGAAGAGGTAGGAAAACAAATTGCAAAAAAGTGCAAAGGTTTGCCTTTAGCACTAAAGACACTTGCTGGTTTGTTACGGTCCAAATCAAAGATTGAAGAGTGGAGACGCATTTTGAGAAGTGAAATATGGGA


Protein sequences

Name Description Sequence
I2 I2 [Nicotiana tabacum].

SRVPSTSLVDESDIFGRQNEIETLVDRLLSVDADGKKYSVIPIVGKAGVGKTTLAKAVYNNEKVKVHFDLKAWFCVSEPYDASRITKGLLQEIGSSNLMVDNNLNQLQIKLKESLKGKKFLIVLDDIWNDKYTEWDDLRIPFAQGEIGSKIIVTTRKESVAEMMVSRPIIMEILSSEFSWPLFKRHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLRSKSKIEEWRRILRSEIW

Domains

Domain Start-End Description Sequence

superfamily: SSF52540
2-242 SSF52540

RVPSTSLVDESDIFGRQNEIETLVDRLLSVDADGKKYSVIPIVGKAGVGKTTLAKAVYNNEKVKVHFDLKAWFCVSEPYDASRITKGLLQEIGSSNLMVDNNLNQLQIKLKESLKGKKFLIVLDDIWNDKYTEWDDLRIPFAQGEIGSKIIVTTRKESVAEMMVSRPIIMEILSSEFSWPLFKRHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLRSKSKIEEWRRILRSEIW

Gene3D: G3DSA:3.40.50.300
9-130 G3DSA:3.40.50.300

VDESDIFGRQNEIETLVDRLLSVDADGKKYSVIPIVGKAGVGKTTLAKAVYNNEKVKVHFDLKAWFCVSEPYDASRITKGLLQEIGSSNLMVDNNLNQLQIKLKESLKGKKFLIVLDDIWND

HMMPfam: PF00931
IPR002182
17-241 NB-ARC,NBS
NB-ARC

RQNEIETLVDRLLSVDADGKKYSVIPIVGKAGVGKTTLAKAVYNNEKVKVHFDLKAWFCVSEPYDASRITKGLLQEIGSSNLMVDNNLNQLQIKLKESLKGKKFLIVLDDIWNDKYTEWDDLRIPFAQGEIGSKIIVTTRKESVAEMMVSRPIIMEILSSEFSWPLFKRHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLRSKSKIEEWRRILRSEI

HMMPanther: PTHR11017:SF20
40-239 PTHR11017:SF20,SUBFAMILY NOT NAMED

VIPIVGKAGVGKTTLAKAVYNNEKVKVHFDLKAWFCVSEPYDASRITKGLLQEIGSSNLMVDNNLNQLQIKLKESLKGKKFLIVLDDIWNDKYTEWDDLRIPFAQGEIGSKIIVTTRKESVAEMMVSRPIIMEILSSEFSWPLFKRHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLRSKSKIEEWRRILRS

HMMPanther: PTHR11017
40-239 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

VIPIVGKAGVGKTTLAKAVYNNEKVKVHFDLKAWFCVSEPYDASRITKGLLQEIGSSNLMVDNNLNQLQIKLKESLKGKKFLIVLDDIWNDKYTEWDDLRIPFAQGEIGSKIIVTTRKESVAEMMVSRPIIMEILSSEFSWPLFKRHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLRSKSKIEEWRRILRS

FPrintScan: PR00364
IPR000767
40-55 DISEASERSIST
Disease resistance protein

VIPIVGKAGVGKTTLA

FPrintScan: PR00364
IPR000767
114-128 DISEASERSIST
Disease resistance protein

SLKGKKFLIVLDDIW

FPrintScan: PR00364
IPR000767
210-224 DISEASERSIST
Disease resistance protein

CKGLPLALKTLAGLL


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Analyses

Blast

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