PRGDB00049308 (I2)

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I2
Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 77641434 (DQ206200)
Gene Class NL
Domain Type NBS, LRR, Others
Gene Species Nicotiana tabacum

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Nicotiana tabacum clone 1828 I2 (I2) gene, partial cds.

DNA Sequence

ACTTTCAACTTCTGTGGTTGATGAATTTGATATCTTTGGTAGGCAGAATGAAATAAATATATTGGTTGACCGTTTATTGTCTGATGATGCAATTAAAAAAAGGTTGACTGTAATTCCTATTGTTGGAATGGCAGGTGTTGGCAAGACAACACTTGCTAAAGTTGTTTACAATGATGAGAAGGTGAAACAACATTTTAAGTTGAAATCTTGGATCTCTGTGTCTGAACCATATGATGTTTTTAGAATAACAAAAGGGTTACTTCAAGAAATTGGTTCATCCGACTTGATGGTTGATAACAATCTTAATCAGCTTCAGATCAAATTGATGGAAAGCTTAAAGGGGAAAAAGTTCCTTATTGTTTTAGATGATGTTTGGAATGACAACTACAATGACTGGTATGACTTGAGAATTCCTTTTGCACAAGGAGAAAATGGAAGTATGATCATTGTGACGACACGTAAGGAGAGTGTTGCCTTGATGATGGGTATTGGGCCAATTAACGTGGGAACTTTGTCTACTGAAGTCTCTTGGCCTTTATTCGAAAGACATGCATTTGAAAATAGGGATCCTAAGGAACATCCAGAACTTGAAGAGGTAGGAAAACAAATTGCAAAGAAGTGCAAAGGATTGCCTTTAGCACTAAAGACGCTTGCTGGTTTGTTGCGCT


Protein sequences

Name Description Sequence
I2 I2 [Nicotiana tabacum].

LSTSVVDEFDIFGRQNEINILVDRLLSDDAIKKRLTVIPIVGMAGVGKTTLAKVVYNDEKVKQHFKLKSWISVSEPYDVFRITKGLLQEIGSSDLMVDNNLNQLQIKLMESLKGKKFLIVLDDVWNDNYNDWYDLRIPFAQGENGSMIIVTTRKESVALMMGIGPINVGTLSTEVSWPLFERHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLR

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR11017
5-222 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

VVDEFDIFGRQNEINILVDRLLSDDAIKKRLTVIPIVGMAGVGKTTLAKVVYNDEKVKQHFKLKSWISVSEPYDVFRITKGLLQEIGSSDLMVDNNLNQLQIKLMESLKGKKFLIVLDDVWNDNYNDWYDLRIPFAQGENGSMIIVTTRKESVALMMGIGPINVGTLSTEVSWPLFERHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLR

HMMPanther: PTHR11017:SF20
5-222 PTHR11017:SF20,SUBFAMILY NOT NAMED

VVDEFDIFGRQNEINILVDRLLSDDAIKKRLTVIPIVGMAGVGKTTLAKVVYNDEKVKQHFKLKSWISVSEPYDVFRITKGLLQEIGSSDLMVDNNLNQLQIKLMESLKGKKFLIVLDDVWNDNYNDWYDLRIPFAQGENGSMIIVTTRKESVALMMGIGPINVGTLSTEVSWPLFERHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLR

Gene3D: G3DSA:3.40.50.300
10-127 G3DSA:3.40.50.300

DIFGRQNEINILVDRLLSDDAIKKRLTVIPIVGMAGVGKTTLAKVVYNDEKVKQHFKLKSWISVSEPYDVFRITKGLLQEIGSSDLMVDNNLNQLQIKLMESLKGKKFLIVLDDVWND

superfamily: SSF52540
10-222 SSF52540

DIFGRQNEINILVDRLLSDDAIKKRLTVIPIVGMAGVGKTTLAKVVYNDEKVKQHFKLKSWISVSEPYDVFRITKGLLQEIGSSDLMVDNNLNQLQIKLMESLKGKKFLIVLDDVWNDNYNDWYDLRIPFAQGENGSMIIVTTRKESVALMMGIGPINVGTLSTEVSWPLFERHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLLR

HMMPfam: PF00931
IPR002182
14-221 NB-ARC,NBS
NB-ARC

RQNEINILVDRLLSDDAIKKRLTVIPIVGMAGVGKTTLAKVVYNDEKVKQHFKLKSWISVSEPYDVFRITKGLLQEIGSSDLMVDNNLNQLQIKLMESLKGKKFLIVLDDVWNDNYNDWYDLRIPFAQGENGSMIIVTTRKESVALMMGIGPINVGTLSTEVSWPLFERHAFENRDPKEHPELEEVGKQIAKKCKGLPLALKTLAGLL

FPrintScan: PR00364
IPR000767
37-52 DISEASERSIST
Disease resistance protein

VIPIVGMAGVGKTTLA

FPrintScan: PR00364
IPR000767
111-125 DISEASERSIST
Disease resistance protein

SLKGKKFLIVLDDVW

FPrintScan: PR00364
IPR000767
207-221 DISEASERSIST
Disease resistance protein

CKGLPLALKTLAGLL


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Analyses

Blast

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