PRGDB00049496 (Pikh)
| Pikh | |
|---|---|
| Gene Type | Putative_R-Genes,_collected_from_NCBI_Protein |
| GenBank | 63103205 (AY914077) |
| Gene Class | Unknown |
| Domain Type | LRR, LRR, LRR |
| Gene Species | Oryza sativa Indica Group |
DNA Sequence
ATGTCAGAGCTTCAATCACTGCCAGACCTCAATAGACTATCACTAGTGAACCTTGAAAAGGTTTCAGACACTGAAGATGCAAGAATGGCAAAACTTCAAGAGAAAGAAAAGCTCGAGACATTGATGTTGAGGTGGAATATGGATGCTGGAAATGCCAGTAGAATAGATCATGAAGTACTTGAAACCCTCCAACCTAGCCAGTGCCTGAAAACTTTGGAGATTGTTGCGTATGAAGGATATGTATTTCCATCTTGGATGACAAGAACCGAGCCATATCTTACATCTCTGGTTGAGATAAGACTAGTTAATATGAGAGCATGTGAAAAGGCATTACCTCCACTTGGGATACTACCATGTCTGAAGATTGCAGAGATAAGTGGAGTTGATAATCTCAGTTCTATTGGTGATAATTTCTATGGTCATAACGGCACATTCCCTTCACTGGAGAAGCTGATTCTATCATACATGACAAGCCTTGAAGTCTGGGAACAGTCATCTAGGATGAATCTGTTTCCTCGTCTTGCAGAACTTGTCATCATTCAGTGCCCAAAATTGAGAGCACTGCATATGGAGTTTCCATCGATTGAAAAGTTGATTTTGTGGATGAATAACAAGATGTTGTACAGCTCGAAGGAAGGTATGAGAGGTGTAGAGAAGAGCCTCGAAAATCTTTCAATTTCTTTCTGTGAAGAGTTGCATGCTTCTTCAGGCTGTGAGGGTCTACAGGCTCTTGATCGCCTCAAGAAGTTGGAGATATGTGGTTGTCATGAATTATCATGCCTCCCACAGGGTTTGCAGCATCTTTCCTCTCTCACCAGCTTGAAAATTGATAACTGCAACAAATTGGAGATTTTGCCAGAATGGTTGGAGAACCTACCTTTTCTACAGATAATGTGTTTGTCTGGCTGTCCAATTCTGCACTCCATTCCTGAAGGCCTAACATGTAGCGACATTATTGTTGAAGATTGCCCCAATTTTAAAGAACCATCAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| NBS-LRR | NBS-LRR [Oryza sativa (indica cultivar-group)]. | MSELQSLPDLNRLSLVNLEKVSDTEDARMAKLQEKEKLETLMLRWNMDAGNASRIDHEVLETLQPSQCLKTLEIVAYEGYVFPSWMTRTEPYLTSLVEIRLVNMRACEKALPPLGILPCLKIAEISGVDNLSSIGDNFYGHNGTFPSLEKLILSYMTSLEVWEQSSRMNLFPRLAELVIIQCPKLRALHMEFPSIEKLILWMNNKMLYSSKEGMRGVEKSLENLSISFCEELHASSGCEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPEWLENLPFLQIMCLSGCPILHSIPEGLTCSDIIVEDCPNFKEPS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR23155 | 1-309 | PTHR23155,LRR,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | MSELQSLPDLNRLSLVNLEKVSDTEDARMAKLQEKEKLETLMLRWNMDAGNASRIDHEVLETLQPSQCLKTLEIVAYEGYVFPSWMTRTEPYLTSLVEIRLVNMRACEKALPPLGILPCLKIAEISGVDNLSSIGDNFYGHNGTFPSLEKLILSYMTSLEVWEQSSRMNLFPRLAELVIIQCPKLRALHMEFPSIEKLILWMNNKMLYSSKEGMRGVEKSLENLSISFCEELHASSGCEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPEWLENLPFLQIMCLSGCPILHSI |
| HMMPanther: PTHR23155:SF216 | 1-309 | PTHR23155:SF216,OS11G0640600 PROTEIN | MSELQSLPDLNRLSLVNLEKVSDTEDARMAKLQEKEKLETLMLRWNMDAGNASRIDHEVLETLQPSQCLKTLEIVAYEGYVFPSWMTRTEPYLTSLVEIRLVNMRACEKALPPLGILPCLKIAEISGVDNLSSIGDNFYGHNGTFPSLEKLILSYMTSLEVWEQSSRMNLFPRLAELVIIQCPKLRALHMEFPSIEKLILWMNNKMLYSSKEGMRGVEKSLENLSISFCEELHASSGCEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPEWLENLPFLQIMCLSGCPILHSI |
| superfamily: SSF52047 | 68-310 | SSF52047,LRR | CLKTLEIVAYEGYVFPSWMTRTEPYLTSLVEIRLVNMRACEKALPPLGILPCLKIAEISGVDNLSSIGDNFYGHNGTFPSLEKLILSYMTSLEVWEQSSRMNLFPRLAELVIIQCPKLRALHMEFPSIEKLILWMNNKMLYSSKEGMRGVEKSLENLSISFCEELHASSGCEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPEWLENLPFLQIMCLSGCPILHSIP |
| Gene3D: G3DSA:3.80.10.10 | 91-306 | G3DSA:3.80.10.10 | PYLTSLVEIRLVNMRACEKALPPLGILPCLKIAEISGVDNLSSIGDNFYGHNGTFPSLEKLILSYMTSLEVWEQSSRMNLFPRLAELVIIQCPKLRALHMEFPSIEKLILWMNNKMLYSSKEGMRGVEKSLENLSISFCEELHASSGCEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLTSLKIDNCNKLEILPEWLENLPFLQIMCLSGCPIL |
List of References
T R Sharma, M S Madhav, B K Singh, P Shanker, T K Jana, V Dalal, A Pandit, A Singh, K Gaikwad, H C Upreti, N K Singh
High-resolution mapping, cloning and molecular characterization of the Pi-k ( h ) gene of rice, which confers resistance to Magnaporthe grisea.
Mol. Genet. Genomics: 2005, 274(6);569-78
PubMed:16228246
WorldCat.org
DOI
(P p)
List of Contributions
There has not been any contribution yet.
